Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 26 | Ad_Hb14 | all | gad2 | 550403 | ZDB-GENE-030909-9 | 1.44e-232 | |||||
| 53 | 26 | Ad_Hb14 | all | slc32a1 | 798575 | ZDB-GENE-061201-1 | 2.25e-183 | |||||
| 53 | 26 | Ad_Hb14 | all | gad1b | 378441 | ZDB-GENE-030909-3 | 2.61e-183 | |||||
| 53 | 26 | Ad_Hb14 | all | gap43 | 30608 | ZDB-GENE-990415-87 | 7.36e-121 | |||||
| 53 | 26 | Ad_Hb14 | all | elavl4 | 30737 | ZDB-GENE-990415-246 | 2.45e-119 | |||||
| 53 | 26 | Ad_Hb14 | all | gata3 | 30458 | ZDB-GENE-990415-82 | 3.06e-100 | |||||
| 53 | 26 | Ad_Hb14 | all | tal1 | 30766 | ZDB-GENE-980526-501 | 1.61e-90 | |||||
| 53 | 26 | Ad_Hb14 | all | slc6a1a | 692318 | ZDB-GENE-060519-23 | 9.8e-89 | |||||
| 53 | 26 | Ad_Hb14 | all | slc6a1b | 492490 | ZDB-GENE-041114-57 | 1.87e-79 | |||||
| 53 | 26 | Ad_Hb14 | all | atp1b1b | 64273 | ZDB-GENE-001127-4 | 1.68e-77 |