Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 25 | Ad_Hb13 | all | stmn1b | 550548 | ZDB-GENE-050417-397 | 1.36e-138 | |||||
| 53 | 25 | Ad_Hb13 | all | gap43 | 30608 | ZDB-GENE-990415-87 | 1.94e-118 | |||||
| 53 | 25 | Ad_Hb13 | all | tubb5 | 386701 | ZDB-GENE-031110-4 | 6.95e-93 | |||||
| 53 | 25 | Ad_Hb13 | all | tuba1c | 573122 | ZDB-GENE-061114-1 | 5.77e-61 | |||||
| 53 | 25 | Ad_Hb13 | all | tuba1a | 573216 | ZDB-GENE-090507-4 | 1.53e-53 | |||||
| 53 | 25 | Ad_Hb13 | all | tmsb | 402820 | ZDB-GENE-050307-5 | 2.37e-46 | |||||
| 53 | 25 | Ad_Hb13 | all | marcksb | 323201 | ZDB-GENE-030131-1921 | 8.3e-42 | |||||
| 53 | 25 | Ad_Hb13 | all | ppp1r14ba | 564838 | ZDB-GENE-060825-331 | 8.96e-40 | |||||
| 53 | 25 | Ad_Hb13 | all | sox11a | 30602 | ZDB-GENE-980526-395 | 2.5e-38 | |||||
| 53 | 25 | Ad_Hb13 | all | cnp | 325896 | ZDB-GENE-030521-29 | 8.43e-27 |