Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 24 | Ad_Hb11 | all | pyya | 30211 | ZDB-GENE-980526-71 | 7.72e-81 | |||||
| 53 | 24 | Ad_Hb11 | all | cbln1 | 436793 | ZDB-GENE-040718-226 | 2.73e-64 | |||||
| 53 | 24 | Ad_Hb11 | all | sox1b | 562710 | ZDB-GENE-060322-5 | 9.05e-62 | |||||
| 53 | 24 | Ad_Hb11 | all | cpne4a | 558729 | ZDB-GENE-060503-427 | 7.03e-55 | |||||
| 53 | 24 | Ad_Hb11 | all | sox1a | 436756 | ZDB-GENE-040718-186 | 9.3e-43 | |||||
| 53 | 24 | Ad_Hb11 | all | phlda2 | 553622 | ZDB-GENE-050522-73 | 1.33e-27 | |||||
| 53 | 24 | Ad_Hb11 | all | elavl4 | 30737 | ZDB-GENE-990415-246 | 7.86e-24 | |||||
| 53 | 24 | Ad_Hb11 | all | cox4i2 | 393776 | ZDB-GENE-040426-1775 | 2.8e-22 | |||||
| 53 | 24 | Ad_Hb11 | all | her9 | 140613 | ZDB-GENE-011213-1 | 2.82e-22 | |||||
| 53 | 24 | Ad_Hb11 | all | atp1b1b | 64273 | ZDB-GENE-001127-4 | 2.15e-18 |