Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
53 | 23 | Ad_Hb10 | all | spa17 | 564082 | ZDB-GENE-061027-337 | 9.15e-79 | |||||
53 | 23 | Ad_Hb10 | all | pvalb7 | 402807 | ZDB-GENE-040718-285 | 8.46e-77 | |||||
53 | 23 | Ad_Hb10 | all | map1b | 559032 | ZDB-GENE-130530-690 | 2.82e-59 | |||||
53 | 23 | Ad_Hb10 | all | capgb | 336597 | ZDB-GENE-030131-8541 | 6.55e-50 | |||||
53 | 23 | Ad_Hb10 | all | cckb | 100000095 | ZDB-GENE-060720-30 | 3.98e-49 | |||||
53 | 23 | Ad_Hb10 | all | igf2a | 30710 | ZDB-GENE-991111-3 | 2.7e-46 | |||||
53 | 23 | Ad_Hb10 | all | zgc:101731 | 447892 | ZDB-GENE-040912-57 | 1e-38 | |||||
53 | 23 | Ad_Hb10 | all | pdyn | 414850 | ZDB-GENE-060417-1 | 1.68e-37 | |||||
53 | 23 | Ad_Hb10 | all | cxcl14 | 58151 | ZDB-GENE-000619-1 | 1.29e-30 | |||||
53 | 23 | Ad_Hb10 | all | glulb | 336473 | ZDB-GENE-030131-8417 | 3.39e-27 |