Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 20 | Ad_Hb06 | all | lrrtm1 | 570385 | ZDB-GENE-050506-80 | 0 | |||||
| 53 | 20 | Ad_Hb06 | all | im:7152348 | 559250 | ZDB-GENE-041111-308 | 0 | |||||
| 53 | 20 | Ad_Hb06 | all | cckb | 100000095 | ZDB-GENE-060720-30 | 0 | |||||
| 53 | 20 | Ad_Hb06 | all | kctd12.1 | 373865 | ZDB-GENE-030902-5 | 4.20449864610901e-321 | |||||
| 53 | 20 | Ad_Hb06 | all | ralyl | 100148343 | ZDB-GENE-060607-5 | 1.69e-239 | |||||
| 53 | 20 | Ad_Hb06 | all | pou3f1 | 30398 | ZDB-GENE-980526-372 | 1.66e-219 | |||||
| 53 | 20 | Ad_Hb06 | all | rpz5 | 100003142 | ZDB-GENE-030131-4678 | 3.81e-194 | |||||
| 53 | 20 | Ad_Hb06 | all | cygb1 | 246090 | ZDB-GENE-020513-1 | 1.24e-166 | |||||
| 53 | 20 | Ad_Hb06 | all | foxa1 | 30541 | ZDB-GENE-990415-78 | 6.14e-151 | |||||
| 53 | 20 | Ad_Hb06 | all | mt2 | 100174951 | ZDB-GENE-030131-4174 | 1.72e-81 |