Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 19 | Ad_Hb05 | all | trh | 266721 | ZDB-GENE-020930-1 | 2.79e-96 | |||||
| 53 | 19 | Ad_Hb05 | all | spa17 | 564082 | ZDB-GENE-061027-337 | 2.76e-89 | |||||
| 53 | 19 | Ad_Hb05 | all | sst1.1 | 326018 | ZDB-GENE-030131-4743 | 5.73e-76 | |||||
| 53 | 19 | Ad_Hb05 | all | pyyb | 793458 | ZDB-GENE-060215-2 | 9.17e-68 | |||||
| 53 | 19 | Ad_Hb05 | all | spx | 101882535 | ZDB-GENE-041210-158 | 4.99e-55 | |||||
| 53 | 19 | Ad_Hb05 | all | ralyl | 100148343 | ZDB-GENE-060607-5 | 1.4e-54 | |||||
| 53 | 19 | Ad_Hb05 | all | qkia | 30471 | ZDB-GENE-990415-230 | 1.02e-51 | |||||
| 53 | 19 | Ad_Hb05 | all | zgc:101731 | 447892 | ZDB-GENE-040912-57 | 5.04e-43 | |||||
| 53 | 19 | Ad_Hb05 | all | tgfbi | 321421 | ZDB-GENE-030131-73 | 3.74e-37 | |||||
| 53 | 19 | Ad_Hb05 | all | inaa | 555251 | ZDB-GENE-060531-65 | 2.23e-23 |