Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 18 | Ad_Hb04 | all | cbln2b | 560583 | ZDB-GENE-070615-12 | 1.8e-133 | |||||
| 53 | 18 | Ad_Hb04 | all | kctd12.1 | 373865 | ZDB-GENE-030902-5 | 6.34e-51 | |||||
| 53 | 18 | Ad_Hb04 | all | cart2 | 550232 | ZDB-GENE-050417-23 | 3.18e-49 | |||||
| 53 | 18 | Ad_Hb04 | all | kctd12.2 | 553403 | ZDB-GENE-060117-4 | 5.34e-32 | |||||
| 53 | 18 | Ad_Hb04 | all | lmo1 | 280646 | ZDB-GENE-021115-6 | 3.86e-28 | |||||
| 53 | 18 | Ad_Hb04 | all | neurod1 | 30169 | ZDB-GENE-990415-172 | 2.98e-26 | |||||
| 53 | 18 | Ad_Hb04 | all | tenm3 | 30155 | ZDB-GENE-990714-19 | 2.47e-24 | |||||
| 53 | 18 | Ad_Hb04 | all | kctd4 | 792402 | ZDB-GENE-040704-71 | 2.02e-22 | |||||
| 53 | 18 | Ad_Hb04 | all | tnfrsf9a | 678622 | ZDB-GENE-060421-8213 | 7.82e-19 | |||||
| 53 | 18 | Ad_Hb04 | all | sst1.1 | 326018 | ZDB-GENE-030131-4743 | 1.22e-12 |