Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 17 | Ad_Hb02B | all | gng2 | 550256 | ZDB-GENE-050417-59 | 0 | |||||
| 53 | 17 | Ad_Hb02B | all | tac3a | 100320280 | ZDB-GENE-090313-253 | 1.22e-218 | |||||
| 53 | 17 | Ad_Hb02B | all | neurod1 | 30169 | ZDB-GENE-990415-172 | 9.96e-187 | |||||
| 53 | 17 | Ad_Hb02B | all | nwd2 | 562320 | NULL | 1.39e-132 | |||||
| 53 | 17 | Ad_Hb02B | all | kctd12.2 | 553403 | ZDB-GENE-060117-4 | 8.75e-130 | |||||
| 53 | 17 | Ad_Hb02B | all | syt6b | 562928 | ZDB-GENE-090601-3 | 1.46e-126 | |||||
| 53 | 17 | Ad_Hb02B | all | rprma | 553689 | ZDB-GENE-050522-218 | 2.84e-118 | |||||
| 53 | 17 | Ad_Hb02B | all | lmo1 | 280646 | ZDB-GENE-021115-6 | 4.62e-117 | |||||
| 53 | 17 | Ad_Hb02B | all | bcl11ba | 100093707 | ZDB-GENE-061207-62 | 9.46e-113 | |||||
| 53 | 17 | Ad_Hb02B | all | drgx | 560399 | ZDB-GENE-070330-1 | 1.75e-87 |