Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 16 | Ad_Hb02A | all | rac2 | 415151 | ZDB-GENE-040625-27 | 8.58e-49 | |||||
| 53 | 16 | Ad_Hb02A | all | gng8 | 553609 | ZDB-GENE-050522-312 | 1.01e-40 | |||||
| 53 | 16 | Ad_Hb02A | all | cyth4a | 566849 | ZDB-GENE-090624-6 | 4.54e-40 | |||||
| 53 | 16 | Ad_Hb02A | all | adrb2a | 565838 | ZDB-GENE-100414-3 | 2.13e-39 | |||||
| 53 | 16 | Ad_Hb02A | all | kctd1 | 555637 | ZDB-GENE-040724-194 | 2.67e-35 | |||||
| 53 | 16 | Ad_Hb02A | all | fam19a2 | NULL | 4.61e-33 | ||||||
| 53 | 16 | Ad_Hb02A | all | tgfbi | 321421 | ZDB-GENE-030131-73 | 1.05e-30 | |||||
| 53 | 16 | Ad_Hb02A | all | si:ch211-215d8.2 | ZDB-GENE-050419-248 | 4.6e-27 | ||||||
| 53 | 16 | Ad_Hb02A | all | rpz5 | 100003142 | ZDB-GENE-030131-4678 | 8.16e-25 | |||||
| 53 | 16 | Ad_Hb02A | all | pde6ha | 393758 | ZDB-GENE-040426-1754 | 1.05e-22 |