Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:10
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 15 | Ad_Hb01 | all | tac3a | 100320280 | ZDB-GENE-090313-253 | 0 | |||||
| 53 | 15 | Ad_Hb01 | all | g0s2 | 568476 | ZDB-GENE-081022-103 | 0 | |||||
| 53 | 15 | Ad_Hb01 | all | fxyd1 | 503884 | ZDB-GENE-050309-14 | 0 | |||||
| 53 | 15 | Ad_Hb01 | all | nrgna | 567608 | ZDB-GENE-090710-4 | 0 | |||||
| 53 | 15 | Ad_Hb01 | all | kctd4 | 792402 | ZDB-GENE-040704-71 | 0 | |||||
| 53 | 15 | Ad_Hb01 | all | adcyap1b | 335625 | ZDB-GENE-041010-89 | 0 | |||||
| 53 | 15 | Ad_Hb01 | all | tgfbi | 321421 | ZDB-GENE-030131-73 | 2.7e-305 | |||||
| 53 | 15 | Ad_Hb01 | all | pkdccb | 565254 | ZDB-GENE-130530-599 | 2.5e-235 | |||||
| 53 | 15 | Ad_Hb01 | all | nr0b1 | 100001692 | ZDB-GENE-070130-1 | 8.16e-181 | |||||
| 53 | 15 | Ad_Hb01 | all | sst1.1 | 326018 | ZDB-GENE-030131-4743 | 3.01e-121 |