Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:15
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 14 | Hb15 | all | kiss1 | 100134982 | ZDB-GENE-080128-1 | 4.58e-80 | |||||
| 53 | 14 | Hb15 | all | si:dkey-117i10.1 | 100330260 | ZDB-GENE-091204-371 | 2.29e-77 | |||||
| 53 | 14 | Hb15 | all | lmo3 | 553774 | ZDB-GENE-050522-201 | 7.39e-74 | |||||
| 53 | 14 | Hb15 | all | csrp2 | 393871 | ZDB-GENE-040426-1863 | 1.3e-60 | |||||
| 53 | 14 | Hb15 | all | wnt11r | 30283 | ZDB-GENE-980526-249 | 8.83e-58 | |||||
| 53 | 14 | Hb15 | all | ak5 | 100003595 | ZDB-GENE-030131-8256 | 6.01e-57 | |||||
| 53 | 14 | Hb15 | all | prkcq | 555521 | ZDB-GENE-041210-195 | 3.25e-51 | |||||
| 53 | 14 | Hb15 | all | aoc1 | 555401 | ZDB-GENE-061103-112 | 5.56e-51 | |||||
| 53 | 14 | Hb15 | all | CABP7 | ZDB-GENE-101112-4 | 1.08e-44 | ||||||
| 53 | 14 | Hb15 | all | crip1 | 541319 | ZDB-GENE-041111-1 | 2.59e-39 | |||||
| 53 | 14 | Hb15 | all | id4 | 664761 | ZDB-GENE-051113-208 | 5.43e-38 | |||||
| 53 | 14 | Hb15 | all | ppp1r14ab | 393783 | ZDB-GENE-040426-1783 | 5.08e-36 | |||||
| 53 | 14 | Hb15 | all | necab1 | 550546 | ZDB-GENE-050417-395 | 5e-34 | |||||
| 53 | 14 | Hb15 | all | alcama | 30194 | ZDB-GENE-990415-30 | 8.58e-31 | |||||
| 53 | 14 | Hb15 | all | kiss1rb | 100002715 | ZDB-GENE-060526-54 | 8.48e-30 |