Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:8
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 10 | Hb11 | all | pyya | 30211 | ZDB-GENE-980526-71 | 0 | |||||
| 53 | 10 | Hb11 | all | cbln1 | 436793 | ZDB-GENE-040718-226 | 1.69e-302 | |||||
| 53 | 10 | Hb11 | all | sox1b | 562710 | ZDB-GENE-060322-5 | 1.55e-160 | |||||
| 53 | 10 | Hb11 | all | phc2a | 171465 | ZDB-GENE-020312-1 | 2.1e-159 | |||||
| 53 | 10 | Hb11 | all | zfhx4 | 556453 | ZDB-GENE-070530-3 | 3.15e-142 | |||||
| 53 | 10 | Hb11 | all | cpne4a | 558729 | ZDB-GENE-060503-427 | 2.32e-111 | |||||
| 53 | 10 | Hb11 | all | drd4a | 503564 | ZDB-GENE-070112-996 | 5.67e-125 | |||||
| 53 | 10 | Hb11 | all | sox1a | 436756 | ZDB-GENE-040718-186 | 1.06e-293 |