Marker Genes
Dataset: Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
- tissue: Habenula
- ontology: Brain
- genotype: Tg(gng8-nfsB-CAAX-GFP)
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 29576475
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: Not reported
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE105115
Rows:11
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53 | 0 | Hb01 | all | g0s2 | 568476 | ZDB-GENE-081022-103 | 0 | |||||
| 53 | 0 | Hb01 | all | adcyap1b | 335625 | ZDB-GENE-041010-89 | 0 | |||||
| 53 | 0 | Hb01 | all | tacr3l | 559201 | ZDB-GENE-061207-19 | 0 | |||||
| 53 | 0 | Hb01 | all | fxyd1 | 503884 | ZDB-GENE-050309-14 | 3.3378718623959e-314 | |||||
| 53 | 0 | Hb01 | all | cavin4b | 494036 | ZDB-GENE-041212-87 | 2.3257328287975e-310 | |||||
| 53 | 0 | Hb01 | all | prox1a | 30679 | ZDB-GENE-980526-397 | 3.97e-273 | |||||
| 53 | 0 | Hb01 | all | impact | 449553 | ZDB-GENE-040927-10 | 5.68e-180 | |||||
| 53 | 0 | Hb01 | all | nrgna | 567608 | ZDB-GENE-090710-4 | 3.37e-265 | |||||
| 53 | 0 | Hb01 | all | ttn.2 | 317731 | ZDB-GENE-030113-2 | 1.21e-135 | |||||
| 53 | 0 | Hb01 | all | kcnd1 | 100001681 | ZDB-GENE-081105-40 | 1.6e-229 | |||||
| 53 | 0 | Hb01 | all | sdc4 | 568593 | ZDB-GENE-061111-1 | 6.16e-198 |