Marker Genes
Dataset: Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes and progenitors
- tissue: Blood
- ontology: Blood
- genotype: -
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 28428369
- subset name: all
- total genes: 21581
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE94820
Rows:22
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | LAIR2 | 3904 | 6478 | 2.2 | 0.93 | 0.19 | 2.22e-69 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | ASAH1 | 427 | 735 | 1.08 | 1 | 0.78 | 1.69e-39 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | APOBEC3A | 200315 | 17343 | 1.67 | 0.92 | 0.62 | 1.04e-41 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | TSPAN14 | 81619 | 23303 | 1.19 | 0.97 | 0.75 | 1.74e-40 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | LIPA | 3988 | 6617 | 1.27 | 0.96 | 0.72 | 3.69e-27 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | CYTIP | 9595 | 9506 | 1.05 | 0.99 | 0.77 | 7.72e-27 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | SIGLEC10 | 89790 | 15620 | 1.07 | 0.98 | 0.87 | 4.47e-28 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | LILRB1 | 10859 | 6605 | 1.06 | 0.97 | 0.73 | 2.79e-25 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | ADGRE1 | 2015 | 3336 | 1.42 | 0.77 | 0.28 | 3.52e-31 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | TTYH3 | 80727 | 22222 | 1.14 | 0.81 | 0.38 | 1.1e-23 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | CAMKK2 | 10645 | 1470 | 1.08 | 0.88 | 0.55 | 1.04e-21 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | CX3CR1 | 1524 | 2558 | 1.08 | 0.88 | 0.53 | 4.41e-25 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | C3AR1 | 719 | 1319 | 1.29 | 0.75 | 0.29 | 3.09e-30 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | HLA-B | 3106 | 4932 | 1.02 | 0.78 | 0.29 | 3.32e-28 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | RASGEF1B | 153020 | 24881 | 1.24 | 0.86 | 0.58 | 1.7e-21 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | BIRC3 | 330 | 591 | 1.34 | 0.72 | 0.33 | 1.19e-25 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | PLIN2 | 123 | 248 | 1.03 | 0.79 | 0.4 | 1.35e-21 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | CD300C | 10871 | 19320 | 1.43 | 0.75 | 0.45 | 3.39e-20 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | CD83 | 9308 | 1703 | 1.16 | 0.82 | 0.63 | 4.6e-16 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | XYLT1 | 64131 | 15516 | 1.24 | 0.63 | 0.24 | 3.81e-17 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | KLF2 | 10365 | 6347 | 1.34 | 0.58 | 0.2 | 1.04e-17 | |
52 | 7 | Mono2 | mostly CD14+CD16++ non-classical monocyte | all | FBP1 | 2203 | 3606 | 1.04 | 0.74 | 0.44 | 4.43e-15 |