Marker Genes
Dataset: Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes and progenitors
- tissue: Blood
- ontology: Blood
- genotype: -
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 28428369
- subset name: all
- total genes: 21581
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE94820
Rows:104
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CD14 | 929 | 1628 | 2.52 | 1 | 0.31 | 1.25e-137 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | VCAN | 1462 | 2464 | 2.32 | 1 | 0.44 | 3.88e-121 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | S100A8 | 6279 | 10498 | 1.98 | 0.99 | 0.4 | 3.98e-107 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | S100A9 | 6280 | 10499 | 1.76 | 1 | 0.69 | 5.67e-109 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | FCN1 | 2219 | 3623 | 1.35 | 1 | 0.65 | 2.63e-131 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | ITGB2 | 3689 | 6155 | 1 | 1 | 0.96 | 1.85e-58 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | LRP1 | 4035 | 6692 | 1.68 | 0.99 | 0.51 | 1.1e-81 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CSF3R | 1441 | 2439 | 1.66 | 0.99 | 0.5 | 3.3e-85 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | TKT | 7086 | 11834 | 1.3 | 0.99 | 0.87 | 7.43e-80 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | LYZ | 4069 | 6740 | 1.1 | 1 | 1 | 4.16e-112 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | APLP2 | 334 | 598 | 1.31 | 1 | 0.78 | 3.7e-64 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | FPR1 | 2357 | 3826 | 1.37 | 1 | 0.54 | 3.78e-70 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CD36 | 948 | 1663 | 1.5 | 0.99 | 0.75 | 4.14e-78 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | S100A12 | 6283 | 10489 | 2.32 | 0.87 | 0.18 | 3.76e-77 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CLEC4E | 26253 | 14555 | 2.39 | 0.89 | 0.46 | 2.96e-86 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | ITGAM | 3684 | 6149 | 1.84 | 0.91 | 0.25 | 3.93e-70 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | SLC2A3 | 6515 | 11007 | 1.8 | 0.96 | 0.43 | 3.4e-65 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CTSD | 1509 | 2529 | 1.25 | 0.98 | 0.74 | 2.74e-74 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | NEAT1 | 283131 | 30815 | 1.1 | 1 | 0.94 | 1.14e-80 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PTAFR | 5724 | 9582 | 1.57 | 0.98 | 0.82 | 1.92e-63 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | TREM1 | 54210 | 17760 | 1.71 | 0.89 | 0.29 | 4.99e-58 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | NAIP | 4671 | 7634 | 1.46 | 0.98 | 0.76 | 3.05e-56 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | NCF1 | 653361 | 7660 | 1.41 | 0.97 | 0.67 | 1.88e-53 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | FCGR2A | 2212 | 3616 | 1.27 | 0.98 | 0.58 | 2.6e-54 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | SCPEP1 | 59342 | 29507 | 1.26 | 0.96 | 0.54 | 2.83e-59 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CTSA | 5476 | 9251 | 1.25 | 0.95 | 0.6 | 1.02e-54 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | NLRP3 | 114548 | 16400 | 1.8 | 0.94 | 0.55 | 8.94e-51 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | ACSL1 | 2180 | 3569 | 1.59 | 0.93 | 0.38 | 1.4e-52 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | SDCBP | 6386 | 10662 | 1.01 | 0.99 | 0.84 | 1.11e-43 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | SLC11A1 | 6556 | 10907 | 1.15 | 0.99 | 0.7 | 1.05e-63 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | IRS2 | 8660 | 6126 | 1.66 | 0.82 | 0.19 | 7.61e-56 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | VNN2 | 8875 | 12706 | 1.84 | 0.82 | 0.23 | 2.56e-59 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | DPYD | 1806 | 3012 | 1.29 | 0.96 | 0.54 | 5.61e-50 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CLEC7A | 64581 | 14558 | 1.08 | 0.98 | 0.93 | 2.98e-60 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | BST1 | 683 | 1118 | 1.73 | 0.82 | 0.28 | 4.77e-52 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PLBD1 | 79887 | 26215 | 1.37 | 0.94 | 0.57 | 6.67e-46 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PYGL | 5836 | 9725 | 1.44 | 0.93 | 0.7 | 3.65e-47 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | QPCT | 25797 | 9753 | 2.3 | 0.75 | 0.18 | 4.21e-58 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | HLA-B | 3106 | 4932 | 1.47 | 0.82 | 0.26 | 1.61e-50 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CD163 | 9332 | 1631 | 1.84 | 0.79 | 0.22 | 6.09e-55 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | AQP9 | 366 | 643 | 1.97 | 0.75 | 0.14 | 4.62e-54 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PELI1 | 57162 | 8827 | 1.26 | 0.96 | 0.89 | 6.1e-49 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | GASK1B | 51313 | 25312 | 1.7 | 0.81 | 0.27 | 6.24e-44 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | GAS7 | 8522 | 4169 | 1.31 | 0.92 | 0.56 | 1.24e-41 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | STAB1 | 23166 | 18628 | 2.03 | 0.74 | 0.15 | 3.22e-51 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CDA | 978 | 1712 | 1.74 | 0.75 | 0.19 | 1.46e-54 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | DOK3 | 79930 | 24583 | 1.4 | 0.84 | 0.29 | 1.15e-44 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | IRAK3 | 11213 | 17020 | 1.28 | 0.94 | 0.59 | 2.42e-42 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PLAUR | 5329 | 9053 | 1.39 | 0.92 | 0.59 | 2e-40 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | AL137655 | NULL | 1.47 | 0.89 | 0.61 | 3.9e-43 | ||
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | LILRA6 | 79168 | 15495 | 1.01 | 1 | 0.88 | 8.82e-47 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | TLR4 | 7099 | 11850 | 1.32 | 0.87 | 0.37 | 4.24e-45 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | AX747598 | NULL | 1.63 | 0.81 | 0.3 | 2.53e-43 | ||
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | TLR2 | 7097 | 11848 | 1.03 | 0.93 | 0.49 | 7.09e-44 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | AGTRAP | 57085 | 13539 | 1.05 | 0.92 | 0.51 | 1.87e-48 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CRISPLD2 | 83716 | 25248 | 2.35 | 0.81 | 0.5 | 3.43e-70 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CCR1 | 1230 | 1602 | 1.51 | 0.78 | 0.27 | 3.76e-39 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | NFAM1 | 150372 | 29872 | 1.18 | 0.9 | 0.57 | 5.36e-35 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | ETS2 | 2114 | 3489 | 1.24 | 0.9 | 0.52 | 4.07e-33 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | RAB27A | 5873 | 9766 | 1.46 | 0.87 | 0.62 | 1.27e-38 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | BNIP3L | 665 | 1085 | 1.11 | 0.93 | 0.64 | 3.15e-43 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | HPSE | 10855 | 5164 | 1.68 | 0.92 | 0.79 | 1.35e-53 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PER1 | 5187 | 8845 | 1.26 | 0.91 | 0.51 | 4.08e-34 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | MEGF9 | 1955 | 3234 | 1.35 | 0.9 | 0.72 | 8.67e-37 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CD300E | 342510 | 28874 | 1.06 | 0.87 | 0.45 | 1.37e-40 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CYP1B1 | 1545 | 2597 | 2.26 | 0.62 | 0.09 | 4.03e-51 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | FCAR | 2204 | 3608 | 1.84 | 0.87 | 0.77 | 6.18e-58 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | SOD2 | 6648 | 11180 | 1.16 | 0.93 | 0.68 | 2.82e-32 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | UPP1 | 7378 | 12576 | 1.4 | 0.81 | 0.39 | 2.73e-33 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | IER3 | 8870 | 5392 | 1.75 | 0.67 | 0.16 | 4.56e-39 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | C5AR1 | 728 | 1338 | 1.07 | 0.89 | 0.48 | 1.01e-35 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | NLRP12 | 91662 | 22938 | 1.38 | 0.94 | 0.87 | 1.15e-41 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | SMN1 | 6606 | 11117 | 1.51 | 0.76 | 0.37 | 1.22e-33 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | DMXL2 | 23312 | 2938 | 1.07 | 0.96 | 0.65 | 1.76e-28 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | NCF1B | 654816 | 32522 | 1.08 | 0.82 | 0.37 | 5.2e-28 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CREB5 | 9586 | 16844 | 1.37 | 0.72 | 0.29 | 1.97e-30 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CR1 | 1378 | 2334 | 1.39 | 0.71 | 0.34 | 6.64e-32 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | ALDH1A1 | 216 | 402 | 2.62 | 0.55 | 0.07 | 4.95e-46 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | ASGR1 | 432 | 742 | 1.56 | 0.67 | 0.23 | 2.09e-31 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | FNDC3B | 64778 | 24670 | 1.33 | 0.84 | 0.63 | 1.66e-29 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | DUSP6 | 1848 | 3072 | 1.05 | 0.84 | 0.48 | 1.46e-25 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | TOM1 | 10043 | 11982 | 1.08 | 0.82 | 0.4 | 3.24e-25 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CDC42EP3 | 10602 | 16943 | 1.24 | 0.78 | 0.43 | 4.85e-24 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | ZBTB16 | 7704 | 12930 | 1.69 | 0.7 | 0.45 | 6.17e-35 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | DYSF | 8291 | 3097 | 1.92 | 0.55 | 0.12 | 2.56e-31 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | KCNE3 | 10008 | 6243 | 1.19 | 0.77 | 0.54 | 5.58e-24 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CD93 | 22918 | 15855 | 1.14 | 0.78 | 0.41 | 5.07e-20 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CEBPD | 1052 | 1835 | 1.14 | 0.65 | 0.23 | 8.25e-25 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | FCGR1A | 2209 | 3613 | 1.69 | 0.57 | 0.15 | 1.65e-29 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PLEKHM1 | 9842 | 29017 | 1.11 | 0.83 | 0.51 | 8.5e-21 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CPM | 1368 | 2311 | 1.05 | 0.91 | 0.81 | 8.67e-23 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | MPP7 | 143098 | 26542 | 1.29 | 0.63 | 0.25 | 1.6e-25 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | LOC101929819 | 101929819 | NULL | 1.69 | 0.56 | 0.15 | 3.52e-28 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | IL1B | 3553 | 5992 | 1.76 | 0.6 | 0.2 | 2.72e-25 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PFKFB3 | 5209 | 8874 | 1.09 | 0.75 | 0.41 | 2.49e-21 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PLD3 | 23646 | 17158 | 1.22 | 0.78 | 0.61 | 1.26e-21 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | SMN1 | 6606 | 11117 | 1.08 | 0.84 | 0.68 | 2.39e-21 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | F13A1 | 2162 | 3531 | 1.54 | 0.55 | 0.17 | 2.76e-27 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | G0S2 | 50486 | 30229 | 1.57 | 0.58 | 0.2 | 2.66e-23 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | LINC01001 | 100133161 | 38540 | 1.26 | 0.72 | 0.46 | 1.21e-20 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | PHF21A | 51317 | 24156 | 1.05 | 0.71 | 0.37 | 2.43e-19 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | TLR8 | 51311 | 15632 | 1.07 | 0.66 | 0.29 | 1.31e-20 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | CLMN | 79789 | 19972 | 1.25 | 0.64 | 0.35 | 9.48e-22 | |
52 | 6 | Mono1 | mostly CD14++CD16G+ç+¦ classical monocyte | all | TNFAIP3 | 7128 | 11896 | 1.16 | 0.82 | 0.56 | 2.46e-17 |