Marker Genes
Dataset: Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes and progenitors
- tissue: Blood
- ontology: Blood
- genotype: -
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 28428369
- subset name: all
- total genes: 21581
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE94820
Rows:59
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
52 | 2 | DC3 | CD1C_B | all | S100A9 | 6280 | 10499 | 2.9 | 1 | 0.56 | 2.2e-84 | |
52 | 2 | DC3 | CD1C_B | all | S100A8 | 6279 | 10498 | 3.55 | 0.97 | 0.17 | 3.05e-87 | |
52 | 2 | DC3 | CD1C_B | all | VCAN | 1462 | 2464 | 2.8 | 1 | 0.24 | 6.42e-90 | |
52 | 2 | DC3 | CD1C_B | all | LYZ | 4069 | 6740 | 1.27 | 1 | 1 | 5.11e-71 | |
52 | 2 | DC3 | CD1C_B | all | ANXA1 | 301 | 533 | 1.38 | 1 | 0.73 | 6.33e-64 | |
52 | 2 | DC3 | CD1C_B | all | PLBD1 | 79887 | 26215 | 1.89 | 0.95 | 0.43 | 3.52e-46 | |
52 | 2 | DC3 | CD1C_B | all | RNASE2 | 6036 | 10045 | 4.11 | 0.81 | 0.05 | 1.46e-70 | |
52 | 2 | DC3 | CD1C_B | all | FCER1A | 2205 | 3609 | 1.39 | 0.98 | 0.48 | 8.01e-49 | |
52 | 2 | DC3 | CD1C_B | all | SLC2A3 | 6515 | 11007 | 1.92 | 0.9 | 0.31 | 8.99e-36 | |
52 | 2 | DC3 | CD1C_B | all | CD163 | 9332 | 1631 | 2.58 | 0.77 | 0.09 | 2.09e-47 | |
52 | 2 | DC3 | CD1C_B | all | CSF3R | 1441 | 2439 | 1.78 | 0.89 | 0.33 | 5.69e-36 | |
52 | 2 | DC3 | CD1C_B | all | MNDA | 4332 | 7183 | 1.08 | 1 | 0.71 | 2.35e-31 | |
52 | 2 | DC3 | CD1C_B | all | CD14 | 929 | 1628 | 3.53 | 0.73 | 0.09 | 1.14e-50 | |
52 | 2 | DC3 | CD1C_B | all | NAIP | 4671 | 7634 | 1.52 | 0.96 | 0.7 | 1.28e-32 | |
52 | 2 | DC3 | CD1C_B | all | CSTA | 1475 | 2481 | 1.31 | 0.91 | 0.32 | 4e-31 | |
52 | 2 | DC3 | CD1C_B | all | FCN1 | 2219 | 3623 | 1 | 0.98 | 0.5 | 5.67e-48 | |
52 | 2 | DC3 | CD1C_B | all | CD1D | 912 | 1637 | 1.87 | 0.83 | 0.34 | 1.04e-37 | |
52 | 2 | DC3 | CD1C_B | all | FPR1 | 2357 | 3826 | 1.21 | 0.91 | 0.37 | 1.1e-39 | |
52 | 2 | DC3 | CD1C_B | all | F13A1 | 2162 | 3531 | 3.15 | 0.67 | 0.07 | 2.87e-44 | |
52 | 2 | DC3 | CD1C_B | all | CLEC10A | 10462 | 16916 | 1.33 | 0.84 | 0.26 | 1.97e-35 | |
52 | 2 | DC3 | CD1C_B | all | CES1 | 1066 | 1863 | 2.46 | 0.68 | 0.12 | 3.86e-41 | |
52 | 2 | DC3 | CD1C_B | all | PID1 | 55022 | 26084 | 1.88 | 0.71 | 0.12 | 1.93e-32 | |
52 | 2 | DC3 | CD1C_B | all | S100A12 | 6283 | 10489 | 3.07 | 0.62 | 0.04 | 1.52e-45 | |
52 | 2 | DC3 | CD1C_B | all | MTMR11 | 10903 | 24307 | 1.41 | 0.76 | 0.2 | 5.05e-28 | |
52 | 2 | DC3 | CD1C_B | all | SMN1 | 6606 | 11117 | 1.26 | 0.8 | 0.27 | 1.62e-24 | |
52 | 2 | DC3 | CD1C_B | all | LAT2 | 7462 | 12749 | 1.19 | 0.88 | 0.49 | 3.4e-20 | |
52 | 2 | DC3 | CD1C_B | all | RETN | 56729 | 20389 | 1.68 | 0.69 | 0.16 | 3.4e-27 | |
52 | 2 | DC3 | CD1C_B | all | TMEM173 | 340061 | 27962 | 1.17 | 0.81 | 0.3 | 1.06e-24 | |
52 | 2 | DC3 | CD1C_B | all | AOAH | 313 | 548 | 1.02 | 0.95 | 0.62 | 2.93e-20 | |
52 | 2 | DC3 | CD1C_B | all | RAB3D | 9545 | 9779 | 1.26 | 0.86 | 0.54 | 5.09e-21 | |
52 | 2 | DC3 | CD1C_B | all | CD36 | 948 | 1663 | 1.03 | 0.92 | 0.68 | 3.98e-24 | |
52 | 2 | DC3 | CD1C_B | all | MGST1 | 4257 | 7061 | 1.33 | 0.72 | 0.25 | 3.55e-25 | |
52 | 2 | DC3 | CD1C_B | all | TREM1 | 54210 | 17760 | 1.97 | 0.61 | 0.12 | 2.54e-27 | |
52 | 2 | DC3 | CD1C_B | all | HNMT | 3176 | 5028 | 1.37 | 0.64 | 0.17 | 3.44e-19 | |
52 | 2 | DC3 | CD1C_B | all | CES1P1 | 51716 | 18546 | 1.71 | 0.52 | 0.05 | 4.73e-30 | |
52 | 2 | DC3 | CD1C_B | all | ADAM15 | 8751 | 193 | 1.3 | 0.7 | 0.28 | 4.54e-16 | |
52 | 2 | DC3 | CD1C_B | all | IL13RA1 | 3597 | 5974 | 1.34 | 0.74 | 0.39 | 1.42e-15 | |
52 | 2 | DC3 | CD1C_B | all | MICAL2 | 9645 | 24693 | 1.53 | 0.61 | 0.16 | 4.98e-18 | |
52 | 2 | DC3 | CD1C_B | all | ITGA5 | 3678 | 6141 | 1.32 | 0.67 | 0.27 | 5.69e-16 | |
52 | 2 | DC3 | CD1C_B | all | CREB5 | 9586 | 16844 | 1.42 | 0.6 | 0.19 | 1.02e-17 | |
52 | 2 | DC3 | CD1C_B | all | IL1B | 3553 | 5992 | 2.26 | 0.51 | 0.06 | 2.86e-23 | |
52 | 2 | DC3 | CD1C_B | all | NR4A2 | 4929 | 7981 | 1.04 | 0.83 | 0.47 | 1.04e-12 | |
52 | 2 | DC3 | CD1C_B | all | MPP7 | 143098 | 26542 | 1.86 | 0.56 | 0.17 | 2.09e-19 | |
52 | 2 | DC3 | CD1C_B | all | PTAFR | 5724 | 9582 | 1.37 | 0.87 | 0.79 | 8.86e-22 | |
52 | 2 | DC3 | CD1C_B | all | HBEGF | 1839 | 3059 | 2.35 | 0.5 | 0.07 | 3.64e-22 | |
52 | 2 | DC3 | CD1C_B | all | NFE2 | 4778 | 7780 | 2.02 | 0.51 | 0.08 | 3.32e-21 | |
52 | 2 | DC3 | CD1C_B | all | ASGR1 | 432 | 742 | 1.65 | 0.52 | 0.09 | 3.78e-20 | |
52 | 2 | DC3 | CD1C_B | all | BST1 | 683 | 1118 | 1.26 | 0.57 | 0.14 | 1.61e-18 | |
52 | 2 | DC3 | CD1C_B | all | IL1RN | 3557 | 6000 | 1.73 | 0.54 | 0.13 | 1.03e-17 | |
52 | 2 | DC3 | CD1C_B | all | NOD2 | 64127 | 5331 | 1.11 | 0.61 | 0.23 | 2.95e-13 | |
52 | 2 | DC3 | CD1C_B | all | NLRP3 | 114548 | 16400 | 1.45 | 0.7 | 0.46 | 1.27e-15 | |
52 | 2 | DC3 | CD1C_B | all | DQ575504 | NULL | 1 | 0.83 | 0.56 | 9.29e-09 | ||
52 | 2 | DC3 | CD1C_B | all | LMNA | 4000 | 6636 | 1.21 | 0.61 | 0.26 | 4.67e-10 | |
52 | 2 | DC3 | CD1C_B | all | CARD19 | 84270 | 28148 | 1.15 | 0.55 | 0.2 | 7.49e-11 | |
52 | 2 | DC3 | CD1C_B | all | IL27RA | 9466 | 17290 | 1.11 | 0.56 | 0.26 | 3.46e-11 | |
52 | 2 | DC3 | CD1C_B | all | NLRP12 | 91662 | 22938 | 1.02 | 0.88 | 0.86 | 2.09e-19 | |
52 | 2 | DC3 | CD1C_B | all | RAB27A | 5873 | 9766 | 1.24 | 0.69 | 0.58 | 2.36e-12 | |
52 | 2 | DC3 | CD1C_B | all | EREG | 2069 | 3443 | 1.74 | 0.65 | 0.54 | 4.04e-23 | |
52 | 2 | DC3 | CD1C_B | all | LOC284454 | 284454 | NULL | 1.3 | 0.89 | 0.86 | 7.4e-18 |