Marker Genes
Dataset: The Neonatal and Adult Human Testis Defined at the Single-Cell Level
- tissue: Testis
- ontology: Testis
- genotype: -
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30726734
- subset name: HighRes Adult
- total genes: Not reported
- clustering: Seurat, PAGODA2
- pseudotime: Monocle
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE124263
Rows:101
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL3 | 6122 | 10332 | 0.5 | 1 | 0.99 | 4.95E-146 | 1.46E-141 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | EEF1A1 | 1915 | 3189 | 0.28 | 0.99 | 0.94 | 8.41E-123 | 2.47E-118 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | NANOS2 | 339345 | 23292 | 0.5 | 0.41 | 0.08 | 1.06E-116 | 3.13E-112 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | DND1 | 373863 | 23799 | 0.57 | 0.89 | 0.54 | 5.73E-105 | 1.69E-100 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HSPH1 | 10808 | 16969 | 0.5 | 0.99 | 0.91 | 1.66E-98 | 4.88E-94 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | USP11 | 8237 | 12609 | 0.5 | 0.97 | 0.8 | 7.2E-96 | 2.12E-91 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS27 | 6232 | 10416 | 0.43 | 1 | 0.99 | 1.62E-95 | 4.75E-91 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS3A | 6189 | 10421 | 0.33 | 0.99 | 0.98 | 2.37E-94 | 6.98E-90 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL7A | 6130 | 10364 | 0.31 | 1 | 0.97 | 3.79E-93 | 1.11E-88 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS19 | 6223 | 10402 | 0.33 | 0.99 | 0.99 | 2.82E-82 | 8.29E-78 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL23A | 6147 | 10317 | 0.34 | 0.99 | 0.98 | 1.59E-71 | 4.68E-67 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SMARCB1 | 6598 | 11103 | 0.39 | 0.96 | 0.83 | 6.35E-71 | 1.87E-66 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | YBX1 | 4904 | 8014 | 0.32 | 0.99 | 0.97 | 1.56E-68 | 4.59E-64 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HAGH | 3029 | 4805 | 0.42 | 0.89 | 0.66 | 2.46E-67 | 7.22E-63 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PABPC1 | 26986 | 8554 | 0.29 | 0.99 | 0.97 | 2.78E-67 | 8.17E-63 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS18 | 6222 | 10401 | 0.29 | 1 | 0.99 | 1.96E-62 | 5.76E-58 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | STIP1 | 10963 | 11387 | 0.4 | 0.93 | 0.76 | 7.01E-62 | 2.06E-57 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SF3B2 | 10992 | 10769 | 0.34 | 0.99 | 0.92 | 1.62E-58 | 4.77E-54 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CKS2 | 1164 | 2000 | 0.3 | 0.99 | 0.94 | 4.91E-58 | 1.45E-53 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PELP1 | 27043 | 30134 | 0.4 | 0.87 | 0.63 | 1.36E-57 | 3.99E-53 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HSP90AB1 | 3326 | 5258 | 0.27 | 1 | 0.99 | 2.23E-57 | 6.57E-53 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL13 | 6137 | 10303 | 0.29 | 1 | 0.99 | 2.5E-57 | 7.36E-53 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL24 | 6152 | 10325 | 0.28 | 0.99 | 0.94 | 3.68E-54 | 1.08E-49 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | EIF3H | 8667 | 3273 | 0.3 | 0.98 | 0.9 | 6.07E-53 | 1.79E-48 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | BAG6 | 7917 | 13919 | 0.35 | 0.93 | 0.79 | 2.17E-51 | 6.38E-47 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HENMT1 | 113802 | 26400 | 0.32 | 0.96 | 0.86 | 3.18E-50 | 9.35E-46 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TAF6 | 6878 | 11540 | 0.37 | 0.84 | 0.6 | 5.2E-50 | 1.53E-45 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL22L1 | 200916 | 27610 | 0.35 | 0.85 | 0.59 | 7.59E-50 | 2.23E-45 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | FTH1 | 2495 | 3976 | 0.26 | 0.99 | 0.99 | 1.03E-49 | 3.03E-45 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL34 | 6164 | 10340 | 0.25 | 0.99 | 0.98 | 2.69E-49 | 7.9E-45 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TECR | 9524 | 4551 | 0.34 | 0.96 | 0.88 | 5.02E-49 | 1.48E-44 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PTOV1 | 53635 | 9632 | 0.33 | 0.96 | 0.85 | 3.14E-48 | 9.24E-44 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CACFD1 | 11094 | 1365 | 0.31 | 0.58 | 0.29 | 9.6E-48 | 2.82E-43 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ALKBH7 | 84266 | 21306 | 0.36 | 0.87 | 0.67 | 9.78E-48 | 2.88E-43 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | FKBP8 | 23770 | 3724 | 0.26 | 0.99 | 0.96 | 3.28E-47 | 9.63E-43 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RRBP1 | 6238 | 10448 | 0.38 | 0.97 | 0.88 | 3.98E-47 | 1.17E-42 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | NOP53 | 29997 | 4333 | 0.27 | 0.97 | 0.89 | 1.3E-46 | 3.81E-42 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | XAB2 | 56949 | 14089 | 0.38 | 0.85 | 0.65 | 3.25E-46 | 9.55E-42 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PTPA | 5524 | 9308 | 0.36 | 0.83 | 0.62 | 3.76E-46 | 1.11E-41 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS15A | 6210 | 10389 | 0.26 | 0.99 | 0.97 | 4.82E-46 | 1.42E-41 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | EIF3F | 8665 | 3275 | 0.26 | 0.95 | 0.84 | 2.1E-45 | 6.18E-41 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RAP1B | 5908 | 9857 | 0.31 | 0.95 | 0.82 | 2.73E-43 | 8.04E-39 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PLD3 | 23646 | 17158 | 0.34 | 0.91 | 0.74 | 8.24E-43 | 2.42E-38 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | EPB41L4A-AS1 | 114915 | 30749 | 0.33 | 0.63 | 0.36 | 9.93E-43 | 2.92E-38 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SHKBP1 | 92799 | 19214 | 0.33 | 0.73 | 0.47 | 4.07E-42 | 1.2E-37 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | MXI1 | 4601 | 7534 | 0.31 | 0.69 | 0.41 | 9.04E-42 | 2.66E-37 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ZCWPW1 | 55063 | 23486 | 0.32 | 0.94 | 0.8 | 2.54E-41 | 7.48E-37 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SCAMP2 | 10066 | 10564 | 0.32 | 0.79 | 0.54 | 7.46E-41 | 2.19E-36 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | LIG1 | 3978 | 6598 | 0.31 | 0.71 | 0.45 | 1.47E-40 | 4.32E-36 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CKS1B | 1163 | 19083 | 0.33 | 0.91 | 0.72 | 1.73E-40 | 5.09E-36 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ATP5MC2 | 517 | 842 | 0.26 | 0.97 | 0.88 | 1.41E-39 | 4.13E-35 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RTCB | 51493 | 26935 | 0.37 | 0.85 | 0.65 | 3.36E-39 | 9.87E-35 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SLC25A6 | 293 | 10992 | 0.3 | 0.88 | 0.68 | 1.08E-38 | 3.18E-34 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CCDC106 | 29903 | 30181 | 0.33 | 0.74 | 0.48 | 2.23E-38 | 6.56E-34 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CIRBP | 1153 | 1982 | 0.29 | 0.96 | 0.79 | 1.11E-37 | 3.27E-33 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PPID | 5481 | 9257 | 0.33 | 0.85 | 0.63 | 1.15E-37 | 3.39E-33 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ANKRD37 | 353322 | 29593 | 0.31 | 0.85 | 0.61 | 1.52E-37 | 4.48E-33 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TRAP1 | 10131 | 16264 | 0.29 | 0.88 | 0.71 | 3.21E-37 | 9.43E-33 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | GARS | 2617 | 4162 | 0.27 | 0.9 | 0.72 | 3.47E-37 | 1.02E-32 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | NRBP1 | 29959 | 7993 | 0.29 | 0.84 | 0.64 | 1.11E-36 | 3.26E-32 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CNOT3 | 4849 | 7879 | 0.3 | 0.75 | 0.5 | 1.15E-36 | 3.39E-32 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ESD | 2098 | 3465 | 0.33 | 0.67 | 0.42 | 1.98E-36 | 5.83E-32 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PODXL2 | 50512 | 17936 | 0.25 | 0.95 | 0.8 | 4.46E-36 | 1.31E-31 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | MED25 | 81857 | 28845 | 0.3 | 0.72 | 0.47 | 6.48E-36 | 1.91E-31 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HSP90AA1 | 3320 | 5253 | 0.27 | 1 | 0.99 | 1.83E-35 | 5.38E-31 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS28 | 6234 | 10418 | 0.25 | 1 | 0.98 | 2.68E-35 | 7.89E-31 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | NDUFV1 | 4723 | 7716 | 0.32 | 0.86 | 0.71 | 2.88E-35 | 8.47E-31 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | UBXN1 | 51035 | 18402 | 0.26 | 0.95 | 0.86 | 2.98E-34 | 8.76E-30 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PDCD4 | 27250 | 8763 | 0.32 | 0.78 | 0.59 | 4.82E-33 | 1.42E-28 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ZBTB43 | 23099 | 17908 | 0.27 | 0.88 | 0.71 | 5.43E-33 | 1.6E-28 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ZFAS1 | 441951 | 33101 | 0.31 | 0.72 | 0.51 | 8.74E-33 | 2.57E-28 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | DDX4 | 54514 | 18700 | 0.3 | 0.9 | 0.74 | 1.07E-32 | 3.13E-28 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | MORC1 | 27136 | 7198 | 0.25 | 0.85 | 0.62 | 1.22E-32 | 3.59E-28 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | GNB2 | 2783 | 4398 | 0.25 | 0.92 | 0.75 | 1.99E-32 | 5.84E-28 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | C12orf10 | 60314 | 17590 | 0.27 | 0.9 | 0.75 | 2.24E-32 | 6.59E-28 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TDP2 | 51567 | 17768 | 0.28 | 0.78 | 0.56 | 7.04E-32 | 2.07E-27 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | WASF2 | 10163 | 12733 | 0.26 | 0.92 | 0.81 | 1.3E-31 | 3.81E-27 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SMARCD3 | 6604 | 11108 | 0.25 | 0.68 | 0.42 | 1.52E-31 | 4.46E-27 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | FIP1L1 | 81608 | 19124 | 0.25 | 0.93 | 0.82 | 2.66E-31 | 7.81E-27 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TMEM39B | 55116 | 25510 | 0.26 | 0.6 | 0.36 | 1.4E-30 | 4.1E-26 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SELENOP | 6414 | 10751 | 0.28 | 0.45 | 0.24 | 3.04E-30 | 8.95E-26 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RABL6 | 55684 | 24703 | 0.29 | 0.78 | 0.58 | 7.87E-30 | 2.32E-25 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | GNL1 | 2794 | 4413 | 0.28 | 0.79 | 0.58 | 8.62E-30 | 2.54E-25 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PIWIL2 | 55124 | 17644 | 0.28 | 0.82 | 0.64 | 1.09E-29 | 3.2E-25 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SGF29 | 112869 | 25156 | 0.27 | 0.67 | 0.45 | 1.8E-29 | 5.29E-25 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | METTL5 | 29081 | 25006 | 0.25 | 0.92 | 0.79 | 4.78E-29 | 1.41E-24 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | XRCC6 | 2547 | 4055 | 0.26 | 0.97 | 0.92 | 5.16E-29 | 1.52E-24 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TOMM7 | 54543 | 21648 | 0.26 | 0.89 | 0.75 | 5.57E-29 | 1.64E-24 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | BCAM | 4059 | 6722 | 0.25 | 0.67 | 0.41 | 1.02E-28 | 3.0E-24 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | POLR2A | 5430 | 9187 | 0.26 | 0.88 | 0.7 | 1.18E-28 | 3.46E-24 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SNHG32 | 50854 | 19078 | 0.29 | 0.72 | 0.5 | 2.14E-28 | 6.3E-24 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | UBA1 | 7317 | 12469 | 0.25 | 0.78 | 0.57 | 4.12E-28 | 1.21E-23 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RARS | 5917 | 9870 | 0.25 | 0.85 | 0.67 | 1.03E-27 | 3.02E-23 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ECSIT | 51295 | 29548 | 0.25 | 0.65 | 0.43 | 1.88E-27 | 5.52E-23 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | UBXN6 | 80700 | 14928 | 0.27 | 0.81 | 0.61 | 7.06E-27 | 2.08E-22 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | IP6K2 | 51447 | 17313 | 0.25 | 0.74 | 0.54 | 1.31E-26 | 3.84E-22 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PRKCSH | 5589 | 9411 | 0.26 | 0.77 | 0.57 | 3.75E-26 | 1.1E-21 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | IQCE | 23288 | 29171 | 0.25 | 0.72 | 0.5 | 1.37E-25 | 4.03E-21 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | OBSL1 | 23363 | 29092 | 0.25 | 0.77 | 0.56 | 6.35E-25 | 1.87E-20 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TLE5 | 166 | 307 | 0.25 | 0.85 | 0.69 | 2.47E-23 | 7.26E-19 |
| 50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | MYCBP | 26292 | 7554 | 0.26 | 0.81 | 0.63 | 3.6E-23 | 1.06E-18 |