Marker Genes
Dataset: The Neonatal and Adult Human Testis Defined at the Single-Cell Level
- tissue: Testis
- ontology: Testis
- genotype: -
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30726734
- subset name: HighRes Adult
- total genes: Not reported
- clustering: Seurat, PAGODA2
- pseudotime: Monocle
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE124263
Rows:101
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL3 | 6122 | 10332 | 0.5 | 1 | 0.99 | 4.95e-146 | 1.46e-141 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | EEF1A1 | 1915 | 3189 | 0.28 | 0.99 | 0.94 | 8.41e-123 | 2.47e-118 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | NANOS2 | 339345 | 23292 | 0.5 | 0.41 | 0.08 | 1.06e-116 | 3.13e-112 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | DND1 | 373863 | 23799 | 0.57 | 0.89 | 0.54 | 5.73e-105 | 1.69e-100 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HSPH1 | 10808 | 16969 | 0.5 | 0.99 | 0.91 | 1.66e-98 | 4.88e-94 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | USP11 | 8237 | 12609 | 0.5 | 0.97 | 0.8 | 7.2e-96 | 2.12e-91 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS27 | 6232 | 10416 | 0.43 | 1 | 0.99 | 1.62e-95 | 4.75e-91 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS3A | 6189 | 10421 | 0.33 | 0.99 | 0.98 | 2.37e-94 | 6.98e-90 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL7A | 6130 | 10364 | 0.31 | 1 | 0.97 | 3.79e-93 | 1.11e-88 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS19 | 6223 | 10402 | 0.33 | 0.99 | 0.99 | 2.82e-82 | 8.29e-78 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL23A | 6147 | 10317 | 0.34 | 0.99 | 0.98 | 1.59e-71 | 4.68e-67 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SMARCB1 | 6598 | 11103 | 0.39 | 0.96 | 0.83 | 6.35e-71 | 1.87e-66 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | YBX1 | 4904 | 8014 | 0.32 | 0.99 | 0.97 | 1.56e-68 | 4.59e-64 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HAGH | 3029 | 4805 | 0.42 | 0.89 | 0.66 | 2.46e-67 | 7.22e-63 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PABPC1 | 26986 | 8554 | 0.29 | 0.99 | 0.97 | 2.78e-67 | 8.17e-63 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS18 | 6222 | 10401 | 0.29 | 1 | 0.99 | 1.96e-62 | 5.76e-58 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | STIP1 | 10963 | 11387 | 0.4 | 0.93 | 0.76 | 7.01e-62 | 2.06e-57 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SF3B2 | 10992 | 10769 | 0.34 | 0.99 | 0.92 | 1.62e-58 | 4.77e-54 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CKS2 | 1164 | 2000 | 0.3 | 0.99 | 0.94 | 4.91e-58 | 1.45e-53 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PELP1 | 27043 | 30134 | 0.4 | 0.87 | 0.63 | 1.36e-57 | 3.99e-53 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HSP90AB1 | 3326 | 5258 | 0.27 | 1 | 0.99 | 2.23e-57 | 6.57e-53 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL13 | 6137 | 10303 | 0.29 | 1 | 0.99 | 2.5e-57 | 7.36e-53 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL24 | 6152 | 10325 | 0.28 | 0.99 | 0.94 | 3.68e-54 | 1.08e-49 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | EIF3H | 8667 | 3273 | 0.3 | 0.98 | 0.9 | 6.07e-53 | 1.79e-48 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | BAG6 | 7917 | 13919 | 0.35 | 0.93 | 0.79 | 2.17e-51 | 6.38e-47 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HENMT1 | 113802 | 26400 | 0.32 | 0.96 | 0.86 | 3.18e-50 | 9.35e-46 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TAF6 | 6878 | 11540 | 0.37 | 0.84 | 0.6 | 5.2e-50 | 1.53e-45 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL22L1 | 200916 | 27610 | 0.35 | 0.85 | 0.59 | 7.59e-50 | 2.23e-45 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | FTH1 | 2495 | 3976 | 0.26 | 0.99 | 0.99 | 1.03e-49 | 3.03e-45 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPL34 | 6164 | 10340 | 0.25 | 0.99 | 0.98 | 2.69e-49 | 7.9e-45 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TECR | 9524 | 4551 | 0.34 | 0.96 | 0.88 | 5.02e-49 | 1.48e-44 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PTOV1 | 53635 | 9632 | 0.33 | 0.96 | 0.85 | 3.14e-48 | 9.24e-44 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CACFD1 | 11094 | 1365 | 0.31 | 0.58 | 0.29 | 9.6e-48 | 2.82e-43 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ALKBH7 | 84266 | 21306 | 0.36 | 0.87 | 0.67 | 9.78e-48 | 2.88e-43 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | FKBP8 | 23770 | 3724 | 0.26 | 0.99 | 0.96 | 3.28e-47 | 9.63e-43 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RRBP1 | 6238 | 10448 | 0.38 | 0.97 | 0.88 | 3.98e-47 | 1.17e-42 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | NOP53 | 29997 | 4333 | 0.27 | 0.97 | 0.89 | 1.3e-46 | 3.81e-42 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | XAB2 | 56949 | 14089 | 0.38 | 0.85 | 0.65 | 3.25e-46 | 9.55e-42 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PTPA | 5524 | 9308 | 0.36 | 0.83 | 0.62 | 3.76e-46 | 1.11e-41 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS15A | 6210 | 10389 | 0.26 | 0.99 | 0.97 | 4.82e-46 | 1.42e-41 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | EIF3F | 8665 | 3275 | 0.26 | 0.95 | 0.84 | 2.1e-45 | 6.18e-41 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RAP1B | 5908 | 9857 | 0.31 | 0.95 | 0.82 | 2.73e-43 | 8.04e-39 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PLD3 | 23646 | 17158 | 0.34 | 0.91 | 0.74 | 8.24e-43 | 2.42e-38 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | EPB41L4A-AS1 | 114915 | 30749 | 0.33 | 0.63 | 0.36 | 9.93e-43 | 2.92e-38 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SHKBP1 | 92799 | 19214 | 0.33 | 0.73 | 0.47 | 4.07e-42 | 1.2e-37 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | MXI1 | 4601 | 7534 | 0.31 | 0.69 | 0.41 | 9.04e-42 | 2.66e-37 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ZCWPW1 | 55063 | 23486 | 0.32 | 0.94 | 0.8 | 2.54e-41 | 7.48e-37 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SCAMP2 | 10066 | 10564 | 0.32 | 0.79 | 0.54 | 7.46e-41 | 2.19e-36 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | LIG1 | 3978 | 6598 | 0.31 | 0.71 | 0.45 | 1.47e-40 | 4.32e-36 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CKS1B | 1163 | 19083 | 0.33 | 0.91 | 0.72 | 1.73e-40 | 5.09e-36 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ATP5MC2 | 517 | 842 | 0.26 | 0.97 | 0.88 | 1.41e-39 | 4.13e-35 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RTCB | 51493 | 26935 | 0.37 | 0.85 | 0.65 | 3.36e-39 | 9.87e-35 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SLC25A6 | 293 | 10992 | 0.3 | 0.88 | 0.68 | 1.08e-38 | 3.18e-34 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CCDC106 | 29903 | 30181 | 0.33 | 0.74 | 0.48 | 2.23e-38 | 6.56e-34 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CIRBP | 1153 | 1982 | 0.29 | 0.96 | 0.79 | 1.11e-37 | 3.27e-33 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PPID | 5481 | 9257 | 0.33 | 0.85 | 0.63 | 1.15e-37 | 3.39e-33 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ANKRD37 | 353322 | 29593 | 0.31 | 0.85 | 0.61 | 1.52e-37 | 4.48e-33 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TRAP1 | 10131 | 16264 | 0.29 | 0.88 | 0.71 | 3.21e-37 | 9.43e-33 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | GARS | 2617 | 4162 | 0.27 | 0.9 | 0.72 | 3.47e-37 | 1.02e-32 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | NRBP1 | 29959 | 7993 | 0.29 | 0.84 | 0.64 | 1.11e-36 | 3.26e-32 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | CNOT3 | 4849 | 7879 | 0.3 | 0.75 | 0.5 | 1.15e-36 | 3.39e-32 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ESD | 2098 | 3465 | 0.33 | 0.67 | 0.42 | 1.98e-36 | 5.83e-32 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PODXL2 | 50512 | 17936 | 0.25 | 0.95 | 0.8 | 4.46e-36 | 1.31e-31 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | MED25 | 81857 | 28845 | 0.3 | 0.72 | 0.47 | 6.48e-36 | 1.91e-31 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | HSP90AA1 | 3320 | 5253 | 0.27 | 1 | 0.99 | 1.83e-35 | 5.38e-31 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RPS28 | 6234 | 10418 | 0.25 | 1 | 0.98 | 2.68e-35 | 7.89e-31 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | NDUFV1 | 4723 | 7716 | 0.32 | 0.86 | 0.71 | 2.88e-35 | 8.47e-31 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | UBXN1 | 51035 | 18402 | 0.26 | 0.95 | 0.86 | 2.98e-34 | 8.76e-30 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PDCD4 | 27250 | 8763 | 0.32 | 0.78 | 0.59 | 4.82e-33 | 1.42e-28 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ZBTB43 | 23099 | 17908 | 0.27 | 0.88 | 0.71 | 5.43e-33 | 1.6e-28 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ZFAS1 | 441951 | 33101 | 0.31 | 0.72 | 0.51 | 8.74e-33 | 2.57e-28 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | DDX4 | 54514 | 18700 | 0.3 | 0.9 | 0.74 | 1.07e-32 | 3.13e-28 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | MORC1 | 27136 | 7198 | 0.25 | 0.85 | 0.62 | 1.22e-32 | 3.59e-28 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | GNB2 | 2783 | 4398 | 0.25 | 0.92 | 0.75 | 1.99e-32 | 5.84e-28 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | C12orf10 | 60314 | 17590 | 0.27 | 0.9 | 0.75 | 2.24e-32 | 6.59e-28 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TDP2 | 51567 | 17768 | 0.28 | 0.78 | 0.56 | 7.04e-32 | 2.07e-27 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | WASF2 | 10163 | 12733 | 0.26 | 0.92 | 0.81 | 1.3e-31 | 3.81e-27 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SMARCD3 | 6604 | 11108 | 0.25 | 0.68 | 0.42 | 1.52e-31 | 4.46e-27 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | FIP1L1 | 81608 | 19124 | 0.25 | 0.93 | 0.82 | 2.66e-31 | 7.81e-27 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TMEM39B | 55116 | 25510 | 0.26 | 0.6 | 0.36 | 1.4e-30 | 4.1e-26 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SELENOP | 6414 | 10751 | 0.28 | 0.45 | 0.24 | 3.04e-30 | 8.95e-26 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RABL6 | 55684 | 24703 | 0.29 | 0.78 | 0.58 | 7.87e-30 | 2.32e-25 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | GNL1 | 2794 | 4413 | 0.28 | 0.79 | 0.58 | 8.62e-30 | 2.54e-25 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PIWIL2 | 55124 | 17644 | 0.28 | 0.82 | 0.64 | 1.09e-29 | 3.2e-25 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SGF29 | 112869 | 25156 | 0.27 | 0.67 | 0.45 | 1.8e-29 | 5.29e-25 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | METTL5 | 29081 | 25006 | 0.25 | 0.92 | 0.79 | 4.78e-29 | 1.41e-24 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | XRCC6 | 2547 | 4055 | 0.26 | 0.97 | 0.92 | 5.16e-29 | 1.52e-24 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TOMM7 | 54543 | 21648 | 0.26 | 0.89 | 0.75 | 5.57e-29 | 1.64e-24 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | BCAM | 4059 | 6722 | 0.25 | 0.67 | 0.41 | 1.02e-28 | 3e-24 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | POLR2A | 5430 | 9187 | 0.26 | 0.88 | 0.7 | 1.18e-28 | 3.46e-24 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | SNHG32 | 50854 | 19078 | 0.29 | 0.72 | 0.5 | 2.14e-28 | 6.3e-24 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | UBA1 | 7317 | 12469 | 0.25 | 0.78 | 0.57 | 4.12e-28 | 1.21e-23 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | RARS | 5917 | 9870 | 0.25 | 0.85 | 0.67 | 1.03e-27 | 3.02e-23 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | ECSIT | 51295 | 29548 | 0.25 | 0.65 | 0.43 | 1.88e-27 | 5.52e-23 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | UBXN6 | 80700 | 14928 | 0.27 | 0.81 | 0.61 | 7.06e-27 | 2.08e-22 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | IP6K2 | 51447 | 17313 | 0.25 | 0.74 | 0.54 | 1.31e-26 | 3.84e-22 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | PRKCSH | 5589 | 9411 | 0.26 | 0.77 | 0.57 | 3.75e-26 | 1.1e-21 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | IQCE | 23288 | 29171 | 0.25 | 0.72 | 0.5 | 1.37e-25 | 4.03e-21 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | OBSL1 | 23363 | 29092 | 0.25 | 0.77 | 0.56 | 6.35e-25 | 1.87e-20 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | TLE5 | 166 | 307 | 0.25 | 0.85 | 0.69 | 2.47e-23 | 7.26e-19 |
50 | 11 | SSC-1C | Spermatogonial stem cells 1C | HighRes Adult | MYCBP | 26292 | 7554 | 0.26 | 0.81 | 0.63 | 3.6e-23 | 1.06e-18 |