Marker Genes

Dataset: Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

  • tissue: Brain
  • ontology: Brain
  • genotype: Danio rerio TL/AB strain
  • stage: 23-25 days post-fertlization (juvenile)
  • treatment condition: WT

Rows:60
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
42 3 tcf7I2+_barhl2+ neurons all SPATC1 NULL 0.72 0.17 0
42 3 tcf7I2+_barhl2+ neurons all meis2a 170454 ZDB-GENE-020122-2 0.58 0.14 0
42 3 tcf7I2+_barhl2+ neurons all zfhx4 556453 ZDB-GENE-070530-3 0.62 0.21 0
42 3 tcf7I2+_barhl2+ neurons all zfhx3 100333211 ZDB-GENE-030131-7577 0.67 0.23 0
42 3 tcf7I2+_barhl2+ neurons all tubb5 386701 ZDB-GENE-031110-4 0.86 0.6 0
42 3 tcf7I2+_barhl2+ neurons all cd99l2 323266 ZDB-GENE-030131-1986 0.9 0.62 0
42 3 tcf7I2+_barhl2+ neurons all lhx9 550405 ZDB-GENE-050417-210 0.37 0.06 0
42 3 tcf7I2+_barhl2+ neurons all SONP1 NULL 0.73 0.42 1.99e-287
42 3 tcf7I2+_barhl2+ neurons all pbx3b 58140 ZDB-GENE-000405-3 0.56 0.3 2.18e-270
42 3 tcf7I2+_barhl2+ neurons all maptb 567833 ZDB-GENE-081027-2 0.88 0.67 1.89e-268
42 3 tcf7I2+_barhl2+ neurons all stmn2b 100003563 ZDB-GENE-050522-207 0.76 0.47 8.03e-250
42 3 tcf7I2+_barhl2+ neurons all barhl2 100001699 ZDB-GENE-050913-153 0.31 0.08 3.8e-237
42 3 tcf7I2+_barhl2+ neurons all EXPH5 NULL 0.47 0.22 3.11e-214
42 3 tcf7I2+_barhl2+ neurons all neurod1 30169 ZDB-GENE-990415-172 0.08 0.31 5.39e-204
42 3 tcf7I2+_barhl2+ neurons all tmsb 402820 ZDB-GENE-050307-5 0.62 0.37 4.69e-203
42 3 tcf7I2+_barhl2+ neurons all mab21l1 246091 ZDB-GENE-020516-1 0.45 0.2 6.31e-192
42 3 tcf7I2+_barhl2+ neurons all cbln2b 560583 ZDB-GENE-070615-12 0.24 0.06 1.3e-188
42 3 tcf7I2+_barhl2+ neurons all zbtb18 100003157 ZDB-GENE-050419-73 0.11 0.32 8.58e-183
42 3 tcf7I2+_barhl2+ neurons all junba 407086 ZDB-GENE-040426-2172 0.08 0.28 1.74e-176
42 3 tcf7I2+_barhl2+ neurons all dpysl3 553166 ZDB-GENE-050720-2 0.8 0.6 2.96e-171
42 3 tcf7I2+_barhl2+ neurons all zc4h2 323487 ZDB-GENE-030131-2207 0.64 0.4 2.94e-164
42 3 tcf7I2+_barhl2+ neurons all qkia 30471 ZDB-GENE-990415-230 0.27 0.45 3.49e-162
42 3 tcf7I2+_barhl2+ neurons all marcksb 323201 ZDB-GENE-030131-1921 0.87 0.71 2.78e-157
42 3 tcf7I2+_barhl2+ neurons all jun 335916 ZDB-GENE-030131-7859 0.24 0.46 2.19e-151
42 3 tcf7I2+_barhl2+ neurons all ccng1 171473 ZDB-GENE-020322-1 0.12 0.32 9.98e-151
42 3 tcf7I2+_barhl2+ neurons all adcyap1b 335625 ZDB-GENE-041010-89 0.42 0.21 1.52e-149
42 3 tcf7I2+_barhl2+ neurons all slc6a1b 492490 ZDB-GENE-041114-57 0.16 0.32 2.89e-147
42 3 tcf7I2+_barhl2+ neurons all tmsb2 566329 ZDB-GENE-070126-5 0.7 0.5 9.46e-137
42 3 tcf7I2+_barhl2+ neurons all slc32a1 798575 ZDB-GENE-061201-1 0.04 0.19 2.44e-130
42 3 tcf7I2+_barhl2+ neurons all si:ch211-132d3.4 323155 ZDB-LINCRNAG-141216-148 0.12 0.32 7.95e-130
42 3 tcf7I2+_barhl2+ neurons all cnp 325896 ZDB-GENE-030521-29 0.48 0.28 5.9e-126
42 3 tcf7I2+_barhl2+ neurons all alcama 30194 ZDB-GENE-990415-30 0.31 0.15 1.97e-124
42 3 tcf7I2+_barhl2+ neurons all dclk1b 100151759 ZDB-GENE-080516-7 0.59 0.42 6.72e-124
42 3 tcf7I2+_barhl2+ neurons all si:ch73-386h18.1 563768 ZDB-GENE-050309-237 0.28 0.11 1.46e-123
42 3 tcf7I2+_barhl2+ neurons all robo2 60309 ZDB-GENE-001019-1 0.41 0.22 2.23e-122
42 3 tcf7I2+_barhl2+ neurons all rnd1a 405780 ZDB-GENE-040630-6 0.31 0.14 3.14e-122
42 3 tcf7I2+_barhl2+ neurons all ppp1r14ba 564838 ZDB-GENE-060825-331 0.38 0.19 3.29e-117
42 3 tcf7I2+_barhl2+ neurons all mllt11 563531 ZDB-GENE-030131-3007 0.74 0.54 8.54e-115
42 3 tcf7I2+_barhl2+ neurons all nsg2 324971 ZDB-GENE-030131-3694 0.68 0.47 1.78e-114
42 3 tcf7I2+_barhl2+ neurons all marcksl1a 406407 ZDB-GENE-040426-2146 0.8 0.64 2.46e-114
42 3 tcf7I2+_barhl2+ neurons all bcl11ba 100093707 ZDB-GENE-061207-62 0.31 0.15 4.36e-108
42 3 tcf7I2+_barhl2+ neurons all tuba2 406303 ZDB-GENE-040426-1970 0.77 0.6 1.8e-106
42 3 tcf7I2+_barhl2+ neurons all pbx1a 58138 ZDB-GENE-000405-1 0.43 0.25 2.94e-102
42 3 tcf7I2+_barhl2+ neurons all h1f0 321618 ZDB-GENE-030131-337 0.38 0.56 2.69e-101
42 3 tcf7I2+_barhl2+ neurons all gadd45ba 406304 ZDB-GENE-040426-1971 0.33 0.49 4.55e-93
42 3 tcf7I2+_barhl2+ neurons all ctnnbip1 58117 ZDB-GENE-000906-3 0.39 0.23 4.91e-93
42 3 tcf7I2+_barhl2+ neurons all zic2a 58077 ZDB-GENE-000710-4 0.14 0.31 1.65e-92
42 3 tcf7I2+_barhl2+ neurons all tob1b 406245 ZDB-GENE-040426-2151 0.29 0.45 4.94e-89
42 3 tcf7I2+_barhl2+ neurons all ywhag2 560560 ZDB-GENE-061023-2 0.76 0.6 5.11e-88
42 3 tcf7I2+_barhl2+ neurons all crmp1 553756 ZDB-GENE-050720-1 0.39 0.24 1.05e-86
42 3 tcf7I2+_barhl2+ neurons all add2 570147 ZDB-GENE-080718-4 0.56 0.4 7.89e-83
42 3 tcf7I2+_barhl2+ neurons all tubb2b 641421 ZDB-GENE-030131-722 0.72 0.56 8.75e-83
42 3 tcf7I2+_barhl2+ neurons all nell2b 336082 ZDB-GENE-030131-8026 0.45 0.28 2.84e-79
42 3 tcf7I2+_barhl2+ neurons all runx1t1 767809 ZDB-GENE-060929-164 0.41 0.26 7.3e-79
42 3 tcf7I2+_barhl2+ neurons all jpt1b 402906 ZDB-GENE-030131-2784 0.62 0.47 5.13e-78
42 3 tcf7I2+_barhl2+ neurons all pim1 572469 ZDB-GENE-061013-139 0.23 0.38 1.13e-76
42 3 tcf7I2+_barhl2+ neurons all ywhaz 336610 ZDB-GENE-030131-8554 0.63 0.47 9.24e-76
42 3 tcf7I2+_barhl2+ neurons all cspg5a 558206 ZDB-GENE-080425-4 0.73 0.57 5.29e-72
42 3 tcf7I2+_barhl2+ neurons all ywhag1 117604 ZDB-GENE-011115-1 0.44 0.29 1.86e-66
42 3 tcf7I2+_barhl2+ neurons all dpysl5a 324416 ZDB-GENE-030131-3136 0.49 0.34 2.04e-64