Marker Genes

Dataset: Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

  • tissue: Brain
  • ontology: Brain
  • genotype: Danio rerio TL/AB strain
  • stage: 23-25 days post-fertlization (juvenile)
  • treatment condition: WT

Rows:169
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
42 21 bnc2+_onecut1+ neurons all bnc2 559327 ZDB-GENE-030131-5784 0.72 0.04 0
42 21 bnc2+_onecut1+ neurons all onecut1 393545 ZDB-GENE-040426-1469 0.64 0.02 0
42 21 bnc2+_onecut1+ neurons all robo1 30769 ZDB-GENE-000209-3 0.69 0.15 0
42 21 bnc2+_onecut1+ neurons all ebf3a 567751 ZDB-GENE-070112-292 0.71 0.21 4.66E-272
42 21 bnc2+_onecut1+ neurons all islr2 541396 ZDB-GENE-050320-95 0.78 0.31 1.07E-253
42 21 bnc2+_onecut1+ neurons all tfap2a 140618 ZDB-GENE-011212-6 0.47 0.09 2.96E-242
42 21 bnc2+_onecut1+ neurons all cd99l2 323266 ZDB-GENE-030131-1986 0.96 0.63 4.83E-239
42 21 bnc2+_onecut1+ neurons all tubb5 386701 ZDB-GENE-031110-4 0.96 0.6 3.57E-234
42 21 bnc2+_onecut1+ neurons all zfhx3 100333211 ZDB-GENE-030131-7577 0.69 0.25 1.6E-216
42 21 bnc2+_onecut1+ neurons all ppp1r14c 568055 ZDB-GENE-050706-92 0.59 0.2 5.45E-216
42 21 bnc2+_onecut1+ neurons all mcama 566921 ZDB-GENE-090218-29 0.64 0.19 1.12E-202
42 21 bnc2+_onecut1+ neurons all h3f3d 394076 ZDB-GENE-040426-1023 0.96 0.8 1.34E-182
42 21 bnc2+_onecut1+ neurons all SPATC1 NULL 0.57 0.19 4.95E-178
42 21 bnc2+_onecut1+ neurons all pou2f2a 557055 ZDB-GENE-060310-2 0.37 0.09 7.81E-155
42 21 bnc2+_onecut1+ neurons all shox2 394171 ZDB-GENE-040426-1457 0.24 0.03 6.83E-140
42 21 bnc2+_onecut1+ neurons all hnrnpa0l 321899 ZDB-GENE-030131-618 0.92 0.68 1.8E-124
42 21 bnc2+_onecut1+ neurons all alcamb 323919 ZDB-GENE-030131-1768 0.2 0.02 4.47E-123
42 21 bnc2+_onecut1+ neurons all sox4a 336346 ZDB-GENE-030131-8290 0.77 0.43 3.69E-119
42 21 bnc2+_onecut1+ neurons all sppl3 548609 ZDB-GENE-050913-71 0.42 0.15 4.63E-111
42 21 bnc2+_onecut1+ neurons all rab11fip1b 402861 ZDB-GENE-091204-322 0.81 0.54 6.71E-111
42 21 bnc2+_onecut1+ neurons all si:ch211-132d3.4 323155 ZDB-LINCRNAG-141216-148 0.03 0.32 1.1E-108
42 21 bnc2+_onecut1+ neurons all barhl2 100001699 ZDB-GENE-050913-153 0.35 0.09 3.56E-103
42 21 bnc2+_onecut1+ neurons all zc4h2 323487 ZDB-GENE-030131-2207 0.73 0.4 5.6E-99
42 21 bnc2+_onecut1+ neurons all aldocb 369193 ZDB-GENE-030821-1 0.35 0.57 5.91E-93
42 21 bnc2+_onecut1+ neurons all fosab 394198 ZDB-GENE-031222-4 0.48 0.69 3.69E-89
42 21 bnc2+_onecut1+ neurons all eno1a 334116 ZDB-GENE-030131-6048 0.24 0.5 2.36E-84
42 21 bnc2+_onecut1+ neurons all sv2a 568033 ZDB-GENE-131001-1 0.28 0.53 2.17E-83
42 21 bnc2+_onecut1+ neurons all marcksb 323201 ZDB-GENE-030131-1921 0.89 0.71 2.1E-82
42 21 bnc2+_onecut1+ neurons all zfhx4 556453 ZDB-GENE-070530-3 0.49 0.22 3.25E-77
42 21 bnc2+_onecut1+ neurons all ZNF563 NULL 0.07 0.3 1.94E-76
42 21 bnc2+_onecut1+ neurons all wdr63 100333131 ZDB-GENE-121116-5 0.18 0.43 2.31E-75
42 21 bnc2+_onecut1+ neurons all dtl 192314 ZDB-GENE-020419-34 0.29 0.09 4.2E-74
42 21 bnc2+_onecut1+ neurons all cnp 325896 ZDB-GENE-030521-29 0.56 0.29 4.48E-74
42 21 bnc2+_onecut1+ neurons all egr4 795099 ZDB-GENE-080204-90 0.19 0.38 1.25E-73
42 21 bnc2+_onecut1+ neurons all syne1a 569553 ZDB-GENE-030131-4172 0.38 0.21 6.09E-73
42 21 bnc2+_onecut1+ neurons all rps21 394166 ZDB-GENE-040426-1102 0.93 0.75 1.24E-72
42 21 bnc2+_onecut1+ neurons all rpl8 393686 ZDB-GENE-040426-1670 0.93 0.76 2.77E-72
42 21 bnc2+_onecut1+ neurons all ppp1r14ba 564838 ZDB-GENE-060825-331 0.44 0.19 3.79E-71
42 21 bnc2+_onecut1+ neurons all TEX101 NULL 0.92 0.75 5.51E-70
42 21 bnc2+_onecut1+ neurons all neurod1 30169 ZDB-GENE-990415-172 0.08 0.3 6.71E-70
42 21 bnc2+_onecut1+ neurons all btbd17b 563672 ZDB-GENE-091204-214 0.23 0.06 1.5E-69
42 21 bnc2+_onecut1+ neurons all rpl32 556556 ZDB-GENE-060331-105 0.89 0.7 2.66E-69
42 21 bnc2+_onecut1+ neurons all tmsb 402820 ZDB-GENE-050307-5 0.62 0.38 6.53E-69
42 21 bnc2+_onecut1+ neurons all kif26ab 58004 ZDB-GENE-100716-6 0.23 0.06 1.31E-67
42 21 bnc2+_onecut1+ neurons all dpysl3 553166 ZDB-GENE-050720-2 0.84 0.6 1.51E-67
42 21 bnc2+_onecut1+ neurons all syt1a 436736 ZDB-GENE-040718-165 0.33 0.49 5.21E-67
42 21 bnc2+_onecut1+ neurons all rpl18 445038 ZDB-GENE-040801-165 0.92 0.75 4.58E-66
42 21 bnc2+_onecut1+ neurons all rnasekb 336290 ZDB-GENE-060825-160 0.35 0.56 4.17E-65
42 21 bnc2+_onecut1+ neurons all afap1 568356 ZDB-GENE-100316-6 0.32 0.14 1.4E-64
42 21 bnc2+_onecut1+ neurons all lmo3 553774 ZDB-GENE-050522-201 0.42 0.19 1.45E-64
42 21 bnc2+_onecut1+ neurons all rpl26 406387 ZDB-GENE-040426-2117 0.93 0.77 1.92E-64
42 21 bnc2+_onecut1+ neurons all si:ch73-1a9.3 556254 ZDB-GENE-141216-84 0.89 0.73 1.32E-63
42 21 bnc2+_onecut1+ neurons all rps15a 336764 ZDB-GENE-030131-8708 0.92 0.76 1.39E-63
42 21 bnc2+_onecut1+ neurons all aldoaa 336425 ZDB-GENE-030131-8369 0.28 0.5 1.77E-63
42 21 bnc2+_onecut1+ neurons all dclk1b 100151759 ZDB-GENE-080516-7 0.64 0.42 3.46E-63
42 21 bnc2+_onecut1+ neurons all dnajb5 569466 ZDB-GENE-070705-308 0.15 0.31 5.79E-63
42 21 bnc2+_onecut1+ neurons all hapln1a 493635 ZDB-GENE-050302-175 0.33 0.12 6.34E-63
42 21 bnc2+_onecut1+ neurons all rpl23 336812 ZDB-GENE-030131-8756 0.92 0.76 6.53E-63
42 21 bnc2+_onecut1+ neurons all slc6a1b 492490 ZDB-GENE-041114-57 0.13 0.31 8.8E-62
42 21 bnc2+_onecut1+ neurons all rpl27 325618 ZDB-GENE-030131-4343 0.86 0.66 1.32E-61
42 21 bnc2+_onecut1+ neurons all rps10 394121 ZDB-GENE-040426-1481 0.91 0.74 2.63E-61
42 21 bnc2+_onecut1+ neurons all rps25 393788 ZDB-GENE-040426-1788 0.88 0.7 9.78E-61
42 21 bnc2+_onecut1+ neurons all hunk 564235 ZDB-GENE-050309-240 0.42 0.19 1.12E-60
42 21 bnc2+_onecut1+ neurons all maptb 567833 ZDB-GENE-081027-2 0.87 0.68 4.84E-60
42 21 bnc2+_onecut1+ neurons all nfil3-5 335737 ZDB-GENE-030131-7677 0.45 0.21 5.7E-60
42 21 bnc2+_onecut1+ neurons all mib2 560887 ZDB-GENE-050628-1 0.32 0.13 1.26E-59
42 21 bnc2+_onecut1+ neurons all gadd45ba 406304 ZDB-GENE-040426-1971 0.28 0.48 1.74E-59
42 21 bnc2+_onecut1+ neurons all rpl7a 337010 ZDB-GENE-031001-9 0.91 0.75 3.85E-59
42 21 bnc2+_onecut1+ neurons all rpl35 192299 ZDB-GENE-020419-2 0.9 0.72 2.55E-58
42 21 bnc2+_onecut1+ neurons all eef1g 195822 ZDB-GENE-020423-3 0.84 0.64 2.89E-57
42 21 bnc2+_onecut1+ neurons all sypb 436774 ZDB-GENE-040718-205 0.19 0.39 3.96E-56
42 21 bnc2+_onecut1+ neurons all zbtb18 100003157 ZDB-GENE-050419-73 0.15 0.32 7.0E-55
42 21 bnc2+_onecut1+ neurons all gad2 550403 ZDB-GENE-030909-9 0.14 0.32 2.08E-54
42 21 bnc2+_onecut1+ neurons all tuba1a 573216 ZDB-GENE-090507-4 0.92 0.74 2.38E-54
42 21 bnc2+_onecut1+ neurons all rps27.1 554155 ZDB-GENE-050522-549 0.87 0.69 3.11E-54
42 21 bnc2+_onecut1+ neurons all rpl14 323365 ZDB-GENE-030131-2085 0.9 0.74 2.73E-53
42 21 bnc2+_onecut1+ neurons all pkma 335817 ZDB-GENE-031201-4 0.22 0.42 3.01E-52
42 21 bnc2+_onecut1+ neurons all tia1 793165 ZDB-GENE-030131-1506 0.45 0.23 1.39E-51
42 21 bnc2+_onecut1+ neurons all faua 393710 ZDB-GENE-040426-1700 0.88 0.7 1.97E-51
42 21 bnc2+_onecut1+ neurons all rps6 445028 ZDB-GENE-040801-8 0.87 0.69 4.19E-51
42 21 bnc2+_onecut1+ neurons all EXPH5 NULL 0.43 0.23 5.46E-51
42 21 bnc2+_onecut1+ neurons all rundc3b 492775 ZDB-GENE-041114-121 0.25 0.43 1.74E-50
42 21 bnc2+_onecut1+ neurons all rpl18a 394035 ZDB-GENE-040426-1071 0.85 0.69 2.0E-50
42 21 bnc2+_onecut1+ neurons all natd1 100002945 ZDB-GENE-050306-19 0.26 0.11 5.67E-50
42 21 bnc2+_onecut1+ neurons all rpl30 336713 ZDB-GENE-030131-8657 0.89 0.71 9.18E-50
42 21 bnc2+_onecut1+ neurons all jpt1b 402906 ZDB-GENE-030131-2784 0.68 0.47 1.76E-49
42 21 bnc2+_onecut1+ neurons all qkia 30471 ZDB-GENE-990415-230 0.29 0.44 2.09E-49
42 21 bnc2+_onecut1+ neurons all rps7 393725 ZDB-GENE-040426-1718 0.89 0.73 2.61E-49
42 21 bnc2+_onecut1+ neurons all lima1a 64000 ZDB-GENE-001120-1 0.32 0.13 3.43E-49
42 21 bnc2+_onecut1+ neurons all rpl28 394036 ZDB-GENE-040930-10 0.88 0.71 1.05E-48
42 21 bnc2+_onecut1+ neurons all elavl3 30732 ZDB-GENE-980526-76 0.9 0.73 1.26E-48
42 21 bnc2+_onecut1+ neurons all ccng1 171473 ZDB-GENE-020322-1 0.13 0.32 1.98E-48
42 21 bnc2+_onecut1+ neurons all rpl17 336641 ZDB-GENE-030131-8585 0.91 0.76 7.06E-48
42 21 bnc2+_onecut1+ neurons all ccdc62 436650 ZDB-GENE-040718-71 0.91 0.75 9.35E-48
42 21 bnc2+_onecut1+ neurons all syt11a 406769 ZDB-GENE-040426-2815 0.34 0.51 1.9E-47
42 21 bnc2+_onecut1+ neurons all NA NULL 0.04 0.19 2.41E-47
42 21 bnc2+_onecut1+ neurons all hnrnpr 406735 ZDB-GENE-040426-2766 0.48 0.27 4.65E-47
42 21 bnc2+_onecut1+ neurons all arhgdig 394132 ZDB-GENE-040426-1493 0.33 0.15 4.9E-47
42 21 bnc2+_onecut1+ neurons all atp6ap2 406296 ZDB-GENE-040426-1960 0.2 0.39 4.56E-46
42 21 bnc2+_onecut1+ neurons all zic2a 58077 ZDB-GENE-000710-4 0.12 0.31 4.73E-46
42 21 bnc2+_onecut1+ neurons all rpl38 436759 ZDB-GENE-030131-8752 0.82 0.64 4.86E-46
42 21 bnc2+_onecut1+ neurons all rps16 767765 ZDB-GENE-050506-107 0.86 0.7 1.27E-45
42 21 bnc2+_onecut1+ neurons all naca 195823 ZDB-GENE-020423-4 0.88 0.72 1.47E-45
42 21 bnc2+_onecut1+ neurons all tuba2 406303 ZDB-GENE-040426-1970 0.8 0.61 3.77E-45
42 21 bnc2+_onecut1+ neurons all pcsk1nl 570305 ZDB-GENE-090427-2 0.26 0.42 4.98E-45
42 21 bnc2+_onecut1+ neurons all rpl24 192301 ZDB-GENE-020419-25 0.88 0.72 6.62E-45
42 21 bnc2+_onecut1+ neurons all bhlhe40 324413 ZDB-GENE-030131-3133 0.09 0.25 7.32E-45
42 21 bnc2+_onecut1+ neurons all junba 407086 ZDB-GENE-040426-2172 0.11 0.28 1.18E-44
42 21 bnc2+_onecut1+ neurons all rpl10a 323305 ZDB-GENE-030131-2025 0.81 0.63 2.27E-44
42 21 bnc2+_onecut1+ neurons all rcc2 406455 ZDB-GENE-040426-2213 0.4 0.21 5.03E-44
42 21 bnc2+_onecut1+ neurons all znf536 565481 ZDB-GENE-030616-624 0.07 0.24 8.76E-44
42 21 bnc2+_onecut1+ neurons all kdm6bb 563644 ZDB-GENE-040724-166 0.45 0.24 1.18E-43
42 21 bnc2+_onecut1+ neurons all elavl4 30737 ZDB-GENE-990415-246 0.41 0.59 6.98E-43
42 21 bnc2+_onecut1+ neurons all dynll2b 572690 ZDB-GENE-050320-132 0.47 0.28 9.86E-43
42 21 bnc2+_onecut1+ neurons all tubb2b 641421 ZDB-GENE-030131-722 0.76 0.57 1.51E-42
42 21 bnc2+_onecut1+ neurons all SONP1 NULL 0.65 0.43 4.69E-42
42 21 bnc2+_onecut1+ neurons all ywhah 406443 ZDB-GENE-040426-2191 0.66 0.48 6.09E-42
42 21 bnc2+_onecut1+ neurons all tmprss9 562051 ZDB-GENE-050208-573 0.36 0.51 8.88E-42
42 21 bnc2+_onecut1+ neurons all rpl34 394097 ZDB-GENE-040426-1033 0.9 0.75 1.22E-41
42 21 bnc2+_onecut1+ neurons all rps17 393818 ZDB-GENE-040426-1852 0.86 0.7 4.84E-41
42 21 bnc2+_onecut1+ neurons all eef2l2 336168 ZDB-GENE-030131-8112 0.09 0.25 5.79E-40
42 21 bnc2+_onecut1+ neurons all fthl27 436651 ZDB-GENE-040718-72 0.59 0.4 6.94E-40
42 21 bnc2+_onecut1+ neurons all nfya 83915 ZDB-GENE-010501-1 0.32 0.15 1.03E-39
42 21 bnc2+_onecut1+ neurons all hnrnpabb 406594 ZDB-GENE-040426-2516 0.71 0.53 1.99E-39
42 21 bnc2+_onecut1+ neurons all mex3b 569582 ZDB-GENE-030131-2628 0.32 0.15 3.2E-39
42 21 bnc2+_onecut1+ neurons all g3bp2 556409 ZDB-GENE-070112-1972 0.55 0.36 5.42E-39
42 21 bnc2+_onecut1+ neurons all syn2a 436870 ZDB-GENE-040718-341 0.15 0.3 7.51E-39
42 21 bnc2+_onecut1+ neurons all h3f3a 406269 ZDB-GENE-040426-1928 0.73 0.54 3.91E-38
42 21 bnc2+_onecut1+ neurons all vamp2 336281 ZDB-GENE-030131-8225 0.36 0.51 4.63E-38
42 21 bnc2+_onecut1+ neurons all ssbp3b 406759 ZDB-GENE-040426-2801 0.41 0.24 7.53E-38
42 21 bnc2+_onecut1+ neurons all si:ch211-288g17.3 567638 ZDB-GENE-030131-461 0.75 0.57 9.71E-38
42 21 bnc2+_onecut1+ neurons all rps15 337148 ZDB-GENE-030131-9092 0.82 0.67 3.05E-37
42 21 bnc2+_onecut1+ neurons all fkbp5 368924 ZDB-GENE-030616-630 0.08 0.24 1.12E-36
42 21 bnc2+_onecut1+ neurons all zgc:153115 768186 ZDB-GENE-061013-418 0.29 0.14 3.84E-36
42 21 bnc2+_onecut1+ neurons all raver1 553693 ZDB-GENE-050522-99 0.46 0.3 4.05E-36
42 21 bnc2+_onecut1+ neurons all zgc:77058 405836 ZDB-GENE-040426-2507 0.39 0.22 4.34E-36
42 21 bnc2+_onecut1+ neurons all rbfox2 406569 ZDB-GENE-040426-2464 0.45 0.27 7.99E-36
42 21 bnc2+_onecut1+ neurons all nr1d2b 30271 ZDB-GENE-990415-244 0.09 0.24 5.06E-35
42 21 bnc2+_onecut1+ neurons all gpia 246094 ZDB-GENE-020513-2 0.21 0.37 1.27E-34
42 21 bnc2+_onecut1+ neurons all irf2bpl 324723 ZDB-GENE-040426-1968 0.53 0.36 1.46E-34
42 21 bnc2+_onecut1+ neurons all cep170aa 557463 ZDB-GENE-090312-109 0.32 0.16 1.96E-34
42 21 bnc2+_onecut1+ neurons all marcksl1a 406407 ZDB-GENE-040426-2146 0.82 0.64 2.78E-34
42 21 bnc2+_onecut1+ neurons all ldha 30496 ZDB-GENE-991026-5 0.1 0.26 3.25E-34
42 21 bnc2+_onecut1+ neurons all rps26 336662 ZDB-GENE-030131-8606 0.8 0.63 4.01E-34
42 21 bnc2+_onecut1+ neurons all nptna 368305 ZDB-GENE-030804-7 0.16 0.31 1.07E-33
42 21 bnc2+_onecut1+ neurons all casp3a 140621 ZDB-GENE-011210-1 0.32 0.16 1.21E-33
42 21 bnc2+_onecut1+ neurons all tmeff1b 553511 ZDB-GENE-050706-143 0.55 0.37 1.36E-33
42 21 bnc2+_onecut1+ neurons all tnrc6c1 560874 ZDB-GENE-030131-7440 0.59 0.44 2.03E-33
42 21 bnc2+_onecut1+ neurons all atp6ap1a 100004566 ZDB-GENE-090312-136 0.18 0.34 3.41E-33
42 21 bnc2+_onecut1+ neurons all scg5 393699 ZDB-GENE-040426-1687 0.18 0.34 4.19E-33
42 21 bnc2+_onecut1+ neurons all fmnl2b 492608 ZDB-GENE-041111-182 0.33 0.17 1.13E-32
42 21 bnc2+_onecut1+ neurons all cst3 791878 ZDB-GENE-030131-373 0.18 0.34 3.04E-32
42 21 bnc2+_onecut1+ neurons all chd4a 558344 ZDB-GENE-041111-187 0.39 0.22 4.15E-32
42 21 bnc2+_onecut1+ neurons all atp6v1f 436799 ZDB-GENE-040718-259 0.14 0.3 5.81E-32
42 21 bnc2+_onecut1+ neurons all prr18 101885898 ZDB-GENE-081107-6 0.3 0.15 3.59E-31
42 21 bnc2+_onecut1+ neurons all atp6v1b2 359840 ZDB-GENE-030711-4 0.2 0.35 6.16E-30
42 21 bnc2+_onecut1+ neurons all smarce1 322248 ZDB-GENE-030131-967 0.58 0.41 6.53E-30
42 21 bnc2+_onecut1+ neurons all ctnnbip1 58117 ZDB-GENE-000906-3 0.4 0.23 1.15E-29
42 21 bnc2+_onecut1+ neurons all tuba1b 373080 ZDB-GENE-030822-1 0.35 0.19 6.26E-29
42 21 bnc2+_onecut1+ neurons all pgk1 406696 ZDB-GENE-040426-2711 0.23 0.38 7.32E-29
42 21 bnc2+_onecut1+ neurons all hdac1 192302 ZDB-GENE-020419-32 0.5 0.34 1.1E-27
42 21 bnc2+_onecut1+ neurons all fscn1a 558271 ZDB-GENE-031009-1 0.44 0.28 7.31E-27
42 21 bnc2+_onecut1+ neurons all nsa2 321769 ZDB-GENE-030131-488 0.42 0.27 7.87E-27
42 21 bnc2+_onecut1+ neurons all si:dkey-177p2.6 568712 ZDB-GENE-030131-5926 0.25 0.41 3.48E-26
42 21 bnc2+_onecut1+ neurons all jun 335916 ZDB-GENE-030131-7859 0.3 0.46 4.31E-26
42 21 bnc2+_onecut1+ neurons all stmn2b 100003563 ZDB-GENE-050522-207 0.65 0.49 5.65E-26
42 21 bnc2+_onecut1+ neurons all top1l 553496 ZDB-GENE-060616-217 0.52 0.37 8.77E-25
42 21 bnc2+_onecut1+ neurons all sesn1 436933 ZDB-GENE-040718-408 0.57 0.42 9.74E-25
42 21 bnc2+_onecut1+ neurons all prdx2 791455 ZDB-GENE-030326-2 0.52 0.37 2.53E-21