Marker Genes

Dataset: Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

  • tissue: Brain
  • ontology: Brain
  • genotype: Danio rerio TL/AB strain
  • stage: 23-25 days post-fertlization (juvenile)
  • treatment condition: WT

Rows:54
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
42 13 atf5b+ neurons all atf5b 567253 ZDB-GENE-030131-2637 0.55 0.04 0
42 13 atf5b+ neurons all hunk 564235 ZDB-GENE-050309-240 0.71 0.18 0
42 13 atf5b+ neurons all gadd45ga 402991 ZDB-GENE-040426-1882 0.51 0.16 0
42 13 atf5b+ neurons all ddit3 561924 ZDB-GENE-070410-90 0.6 0.08 0
42 13 atf5b+ neurons all cebpa 140815 ZDB-GENE-020111-2 0.44 0.04 0
42 13 atf5b+ neurons all camta1b 497465 ZDB-GENE-080229-1 0.69 0.32 0
42 13 atf5b+ neurons all cebpb 140814 ZDB-GENE-020111-3 0.34 0.07 1.22E-212
42 13 atf5b+ neurons all eif2ak3 559564 ZDB-GENE-050414-2 0.28 0.05 1.32E-209
42 13 atf5b+ neurons all ppp1r15a 797943 ZDB-GENE-030131-4408 0.77 0.57 2.32E-206
42 13 atf5b+ neurons all trim13 553630 ZDB-GENE-050522-516 0.44 0.16 1.09E-170
42 13 atf5b+ neurons all sesn1 436933 ZDB-GENE-040718-408 0.66 0.41 9.68E-167
42 13 atf5b+ neurons all bada 564921 ZDB-GENE-030131-2378 0.34 0.11 3.43E-150
42 13 atf5b+ neurons all serinc5 406835 ZDB-GENE-040426-2918 0.42 0.18 1.83E-146
42 13 atf5b+ neurons all foxo3b 30296 ZDB-GENE-990708-6 0.55 0.3 3.13E-141
42 13 atf5b+ neurons all cebpg 140816 ZDB-GENE-020111-5 0.44 0.23 4.88E-140
42 13 atf5b+ neurons all nsg2 324971 ZDB-GENE-030131-3694 0.76 0.47 2.34E-134
42 13 atf5b+ neurons all sox4a 336346 ZDB-GENE-030131-8290 0.66 0.42 4.06E-126
42 13 atf5b+ neurons all mafgb 405877 ZDB-GENE-040426-2403 0.2 0.04 1.71E-122
42 13 atf5b+ neurons all tcf7l2 30510 ZDB-GENE-991110-8 0.41 0.19 5.73E-112
42 13 atf5b+ neurons all lin7a 393682 ZDB-GENE-040426-1665 0.35 0.18 6.82E-107
42 13 atf5b+ neurons all pbx3b 58140 ZDB-GENE-000405-3 0.55 0.31 1.03E-98
42 13 atf5b+ neurons all ccng1 171473 ZDB-GENE-020322-1 0.1 0.32 7.09E-97
42 13 atf5b+ neurons all qkia 30471 ZDB-GENE-990415-230 0.24 0.44 1.82E-93
42 13 atf5b+ neurons all zbtb18 100003157 ZDB-GENE-050419-73 0.13 0.32 4.08E-90
42 13 atf5b+ neurons all stmn4 406710 ZDB-GENE-040426-2732 0.75 0.52 7.67E-90
42 13 atf5b+ neurons all prr18 101885898 ZDB-GENE-081107-6 0.33 0.15 1.53E-83
42 13 atf5b+ neurons all camk2n1a 553607 ZDB-GENE-050522-319 0.36 0.17 3.91E-83
42 13 atf5b+ neurons all pcdh18a 572532 ZDB-GENE-000607-1 0.22 0.07 1.04E-81
42 13 atf5b+ neurons all neurod1 30169 ZDB-GENE-990415-172 0.11 0.3 1.06E-80
42 13 atf5b+ neurons all klf11a 560787 ZDB-GENE-030131-3568 0.33 0.16 6.34E-77
42 13 atf5b+ neurons all cd99l2 323266 ZDB-GENE-030131-1986 0.8 0.63 7.79E-76
42 13 atf5b+ neurons all dyrk1b 556212 ZDB-GENE-060503-499 0.42 0.25 1.88E-72
42 13 atf5b+ neurons all kdm6bb 563644 ZDB-GENE-040724-166 0.42 0.24 2.29E-70
42 13 atf5b+ neurons all ywhag2 560560 ZDB-GENE-061023-2 0.79 0.61 4.83E-70
42 13 atf5b+ neurons all zfhx3 100333211 ZDB-GENE-030131-7577 0.44 0.25 1.05E-68
42 13 atf5b+ neurons all slc25a55a 406717 ZDB-GENE-040426-2745 0.09 0.27 1.56E-67
42 13 atf5b+ neurons all ldb2b 30578 ZDB-GENE-990415-137 0.39 0.23 1.9E-67
42 13 atf5b+ neurons all rnd1a 405780 ZDB-GENE-040630-6 0.3 0.14 1.54E-66
42 13 atf5b+ neurons all cspg5a 558206 ZDB-GENE-080425-4 0.77 0.57 8.07E-66
42 13 atf5b+ neurons all tuba8l4 393154 ZDB-GENE-040426-860 0.31 0.48 1.18E-64
42 13 atf5b+ neurons all junba 407086 ZDB-GENE-040426-2172 0.11 0.28 5.67E-64
42 13 atf5b+ neurons all grin1b 100005675 ZDB-GENE-051202-2 0.4 0.22 4.02E-63
42 13 atf5b+ neurons all plxna1a 795761 ZDB-GENE-140106-137 0.44 0.26 8.38E-63
42 13 atf5b+ neurons all pde4ba 565706 ZDB-GENE-030131-9570 0.5 0.32 7.02E-60
42 13 atf5b+ neurons all ywhag1 117604 ZDB-GENE-011115-1 0.46 0.29 2.5E-59
42 13 atf5b+ neurons all prr12b 557848 ZDB-GENE-130625-2 0.44 0.29 2.29E-53
42 13 atf5b+ neurons all aldoaa 336425 ZDB-GENE-030131-8369 0.33 0.5 1.28E-51
42 13 atf5b+ neurons all egr1 30498 ZDB-GENE-980526-320 0.15 0.3 2.88E-51
42 13 atf5b+ neurons all zic2a 58077 ZDB-GENE-000710-4 0.15 0.31 3.04E-46
42 13 atf5b+ neurons all map4l 100537884 ZDB-GENE-070912-581 0.55 0.39 1.31E-45
42 13 atf5b+ neurons all ebf3a 567751 ZDB-GENE-070112-292 0.37 0.22 1.03E-44
42 13 atf5b+ neurons all calr3a 30248 ZDB-GENE-000208-17 0.22 0.38 5.64E-44
42 13 atf5b+ neurons all cbfa2t3 563252 ZDB-GENE-070209-2 0.45 0.3 2.31E-43
42 13 atf5b+ neurons all jun 335916 ZDB-GENE-030131-7859 0.29 0.46 4.4E-39