Marker Genes

Dataset: Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

  • tissue: Brain
  • ontology: Brain
  • genotype: Danio rerio TL/AB strain
  • stage: 23-25 days post-fertlization (juvenile)
  • treatment condition: WT

Rows:59
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
42 0 Nascent forebrain neurons all eomesa 64603 ZDB-GENE-001228-1 0.3 0.05 0
42 0 Nascent forebrain neurons all tubb5 386701 ZDB-GENE-031110-4 0.91 0.59 0
42 0 Nascent forebrain neurons all tbr1b 58042 ZDB-GENE-000323-1 0.32 0.03 0
42 0 Nascent forebrain neurons all neurod6b 114415 ZDB-GENE-010608-2 0.37 0.09 0
42 0 Nascent forebrain neurons all tuba1a 573216 ZDB-GENE-090507-4 0.91 0.74 0
42 0 Nascent forebrain neurons all cd99l2 323266 ZDB-GENE-030131-1986 0.88 0.62 0
42 0 Nascent forebrain neurons all bhlhe22 393930 ZDB-GENE-040426-1411 0.34 0.09 2.54516408122455e-310
42 0 Nascent forebrain neurons all maptb 567833 ZDB-GENE-081027-2 0.86 0.67 1.28e-304
42 0 Nascent forebrain neurons all nr2f2 30424 ZDB-GENE-990415-252 0.4 0.14 2.25e-302
42 0 Nascent forebrain neurons all si:ch211-222l21.1 795027 ZDB-GENE-030131-247 0.92 0.76 2.25e-298
42 0 Nascent forebrain neurons all aldocb 369193 ZDB-GENE-030821-1 0.34 0.58 1.37e-272
42 0 Nascent forebrain neurons all zbtb18 100003157 ZDB-GENE-050419-73 0.53 0.3 1.46e-260
42 0 Nascent forebrain neurons all dpysl3 553166 ZDB-GENE-050720-2 0.81 0.6 1.78e-255
42 0 Nascent forebrain neurons all gap43 30608 ZDB-GENE-990415-87 0.69 0.42 2.35e-247
42 0 Nascent forebrain neurons all ppp1r14ba 564838 ZDB-GENE-060825-331 0.45 0.18 1.14e-243
42 0 Nascent forebrain neurons all r3hdm1 110437712 NULL 0.7 0.48 2.52e-241
42 0 Nascent forebrain neurons all BX957331.1 NULL 0.3 0.53 1.16e-240
42 0 Nascent forebrain neurons all tmsb 402820 ZDB-GENE-050307-5 0.65 0.37 2.54e-237
42 0 Nascent forebrain neurons all rps8a 407690 ZDB-GENE-030131-8626 0.9 0.75 5.78e-222
42 0 Nascent forebrain neurons all marcksb 323201 ZDB-GENE-030131-1921 0.87 0.7 1.3e-208
42 0 Nascent forebrain neurons all nr2f1a 30418 ZDB-GENE-980526-115 0.34 0.13 1.44e-207
42 0 Nascent forebrain neurons all dclk1b 100151759 ZDB-GENE-080516-7 0.61 0.41 1.92e-194
42 0 Nascent forebrain neurons all vim 140599 ZDB-GENE-011212-3 0.3 0.12 7.32e-188
42 0 Nascent forebrain neurons all cnp 325896 ZDB-GENE-030521-29 0.52 0.28 2.46e-179
42 0 Nascent forebrain neurons all snap25b 30711 ZDB-GENE-980526-392 0.25 0.43 2.43e-178
42 0 Nascent forebrain neurons all sox4a 336346 ZDB-GENE-030131-8290 0.66 0.42 9.53e-176
42 0 Nascent forebrain neurons all jpt1b 402906 ZDB-GENE-030131-2784 0.65 0.46 3.54e-165
42 0 Nascent forebrain neurons all rps9 114420 ZDB-GENE-010724-15 0.86 0.7 8.51e-157
42 0 Nascent forebrain neurons all slc6a1b 492490 ZDB-GENE-041114-57 0.15 0.32 9.59e-156
42 0 Nascent forebrain neurons all stmn2b 100003563 ZDB-GENE-050522-207 0.66 0.48 3.28e-155
42 0 Nascent forebrain neurons all rps12 337007 ZDB-GENE-030131-8951 0.85 0.7 6.2e-155
42 0 Nascent forebrain neurons all grm2b 564461 ZDB-GENE-060201-5 0.25 0.09 3.36e-153
42 0 Nascent forebrain neurons all pygmb 393444 ZDB-GENE-040426-1206 0.09 0.28 3.25e-150
42 0 Nascent forebrain neurons all rps6 445028 ZDB-GENE-040801-8 0.84 0.68 5.94e-147
42 0 Nascent forebrain neurons all ndrg3a 30286 ZDB-GENE-980526-124 0.25 0.44 1.21e-145
42 0 Nascent forebrain neurons all eno1a 334116 ZDB-GENE-030131-6048 0.32 0.51 2.8e-142
42 0 Nascent forebrain neurons all tuba1b 373080 ZDB-GENE-030822-1 0.39 0.19 2.12e-141
42 0 Nascent forebrain neurons all eef1g 195822 ZDB-GENE-020423-3 0.8 0.63 5.81e-141
42 0 Nascent forebrain neurons all sypb 436774 ZDB-GENE-040718-205 0.22 0.4 4.03e-138
42 0 Nascent forebrain neurons all atp2b4 768304 ZDB-GENE-061027-60 0.23 0.42 2.85e-136
42 0 Nascent forebrain neurons all rplp2l 558312 ZDB-GENE-070327-2 0.77 0.58 1.3e-135
42 0 Nascent forebrain neurons all lrp8 557734 ZDB-GENE-050506-134 0.33 0.16 1.37e-132
42 0 Nascent forebrain neurons all sh3gl2a 394091 ZDB-GENE-040121-3 0.11 0.29 4.74e-129
42 0 Nascent forebrain neurons all zfpm2a 568996 ZDB-GENE-060130-4 0.34 0.17 1.89e-128
42 0 Nascent forebrain neurons all draxin 619245 ZDB-GENE-050913-20 0.35 0.18 2.6e-123
42 0 Nascent forebrain neurons all rpl27 325618 ZDB-GENE-030131-4343 0.81 0.66 2.47e-111
42 0 Nascent forebrain neurons all pkma 335817 ZDB-GENE-031201-4 0.26 0.43 3.61e-108
42 0 Nascent forebrain neurons all rpl5b 415196 ZDB-GENE-040625-93 0.75 0.59 1.26e-107
42 0 Nascent forebrain neurons all tuba2 406303 ZDB-GENE-040426-1970 0.75 0.6 1.13e-101
42 0 Nascent forebrain neurons all fscn1a 558271 ZDB-GENE-031009-1 0.44 0.27 1.19e-100
42 0 Nascent forebrain neurons all islr2 541396 ZDB-GENE-050320-95 0.48 0.3 1.21e-99
42 0 Nascent forebrain neurons all tuba8l4 393154 ZDB-GENE-040426-860 0.64 0.47 2.16e-99
42 0 Nascent forebrain neurons all atp2b3a 436745 ZDB-GENE-040718-174 0.21 0.38 1.57e-98
42 0 Nascent forebrain neurons all cst3 791878 ZDB-GENE-030131-373 0.18 0.35 4.09e-93
42 0 Nascent forebrain neurons all gadd45ba 406304 ZDB-GENE-040426-1971 0.32 0.49 4.89e-92
42 0 Nascent forebrain neurons all zc4h2 323487 ZDB-GENE-030131-2207 0.58 0.4 2.09e-90
42 0 Nascent forebrain neurons all itm2ba 323632 ZDB-GENE-030131-2352 0.21 0.38 2.25e-89
42 0 Nascent forebrain neurons all rps17 393818 ZDB-GENE-040426-1852 0.64 0.46 1.04e-88
42 0 Nascent forebrain neurons all mllt11 563531 ZDB-GENE-030131-3007 0.7 0.54 1.61e-87