Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 9 | Vascular6 | all | Aqp1 | 11826 | 103201 | 3.09 | 0.83 | 0.24 | 0 | 0 | |
41 | 9 | Vascular6 | all | Slc14a1 | 108052 | 1351654 | 2.45 | 0.71 | 0.02 | 0 | 0 | |
41 | 9 | Vascular6 | all | Cldn5 | 12741 | 1276112 | 2.38 | 0.54 | 0.03 | 0 | 0 | |
41 | 9 | Vascular6 | all | Scin | 20259 | 1306794 | 1.92 | 0.88 | 0.21 | 0 | 0 | |
41 | 9 | Vascular6 | all | Tspan8 | 216350 | 2384918 | 1.7 | 0.66 | 0.21 | 0 | 0 | |
41 | 9 | Vascular6 | all | Vim | 22352 | 98932 | 1.62 | 0.89 | 0.2 | 0 | 0 | |
41 | 9 | Vascular6 | all | Gja4 | 14612 | 95715 | 1.46 | 0.64 | 0.06 | 0 | 0 | |
41 | 9 | Vascular6 | all | Cthrc1 | 68588 | 1915838 | 1.38 | 0.44 | 0.01 | 0 | 0 | |
41 | 9 | Vascular6 | all | Plat | 18791 | 97610 | 1.33 | 0.77 | 0.25 | 0 | 0 | |
41 | 9 | Vascular6 | all | Rhoj | 80837 | 1931551 | 1.33 | 0.58 | 0.1 | 0 | 0 | |
41 | 9 | Vascular6 | all | Tinagl1 | 94242 | 2137617 | 1.32 | 0.96 | 0.4 | 0 | 0 | |
41 | 9 | Vascular6 | all | Fam181b | 58238 | 1930951 | 1.32 | 0.52 | 0.01 | 0 | 0 | |
41 | 9 | Vascular6 | all | Prom1 | 19126 | 1100886 | 1.32 | 0.61 | 0.12 | 0 | 0 | |
41 | 9 | Vascular6 | all | Fbln5 | 23876 | 1346091 | 1.27 | 0.51 | 0.03 | 0 | 0 | |
41 | 9 | Vascular6 | all | Sncg | 20618 | 1298397 | 1.26 | 0.73 | 0.19 | 0 | 0 | |
41 | 9 | Vascular6 | all | Egfl8 | 81701 | 1932094 | 1.22 | 0.48 | 0.04 | 0 | 0 | |
41 | 9 | Vascular6 | all | Tm4sf1 | 17112 | 104678 | 1.2 | 0.99 | 0.42 | 0 | 0 | |
41 | 9 | Vascular6 | all | Gja5 | 14613 | 95716 | 1.18 | 0.44 | 0.01 | 0 | 0 | |
41 | 9 | Vascular6 | all | Mpzl1 | 68481 | 1915731 | 1.18 | 0.82 | 0.25 | 0 | 0 | |
41 | 9 | Vascular6 | all | Ptprr | 19279 | 109559 | 1.16 | 0.55 | 0.04 | 0 | 0 | |
41 | 9 | Vascular6 | all | Mmrn2 | 105450 | 2385618 | 1.16 | 0.83 | 0.24 | 0 | 0 | |
41 | 9 | Vascular6 | all | Slc9a3r2 | 65962 | 1890662 | 1.14 | 0.92 | 0.31 | 0 | 0 | |
41 | 9 | Vascular6 | all | S100a4 | 20198 | 1330282 | 1.13 | 0.52 | 0.1 | 0 | 0 | |
41 | 9 | Vascular6 | all | Pltp | 18830 | 103151 | 1.13 | 0.58 | 0.14 | 0 | 0 | |
41 | 9 | Vascular6 | all | Ifitm3 | 66141 | 1913391 | 1.12 | 1 | 0.58 | 0 | 0 | |
41 | 9 | Vascular6 | all | Sparc | 20692 | 98373 | 1.12 | 0.96 | 0.35 | 0 | 0 | |
41 | 9 | Vascular6 | all | Edn1 | 13614 | 95283 | 1.11 | 0.39 | 0.04 | 0 | 0 | |
41 | 9 | Vascular6 | all | Irf7 | 54123 | 1859212 | 1.1 | 0.68 | 0.18 | 0 | 0 | |
41 | 9 | Vascular6 | all | S100a6 | 20200 | 1339467 | 1.09 | 0.89 | 0.42 | 0 | 0 | |
41 | 9 | Vascular6 | all | Ehd4 | 98878 | 1919619 | 1.07 | 0.95 | 0.51 | 0 | 0 | |
41 | 9 | Vascular6 | all | Mecom | 14013 | 95457 | 1.06 | 0.74 | 0.24 | 0 | 0 | |
41 | 9 | Vascular6 | all | Esam | 69524 | 1916774 | 1.06 | 0.94 | 0.34 | 0 | 0 | |
41 | 9 | Vascular6 | all | Lef1 | 16842 | 96770 | 1.06 | 0.49 | 0.03 | 0 | 0 | |
41 | 9 | Vascular6 | all | Tmem252 | 226040 | 3583948 | 1.06 | 0.55 | 0.13 | 0 | 0 | |
41 | 9 | Vascular6 | all | Ly6a | 110454 | 107527 | 1.06 | 0.99 | 0.63 | 0 | 0 | |
41 | 9 | Vascular6 | all | Igfbp3 | 16009 | 96438 | 1.05 | 0.56 | 0.11 | 0 | 0 | |
41 | 9 | Vascular6 | all | Kctd10 | 330171 | 2141207 | 1.04 | 0.74 | 0.22 | 0 | 0 | |
41 | 9 | Vascular6 | all | Cd93 | 17064 | 106664 | 1.04 | 0.68 | 0.18 | 0 | 0 | |
41 | 9 | Vascular6 | all | Ecscr | 68545 | 1915795 | 1.01 | 0.79 | 0.22 | 0 | 0 | |
41 | 9 | Vascular6 | all | Ly6c1 | 17067 | 96882 | 0.99 | 1 | 0.53 | 0 | 0 | |
41 | 9 | Vascular6 | all | Cavin3 | 109042 | 1923422 | 0.98 | 0.88 | 0.31 | 0 | 0 | |
41 | 9 | Vascular6 | all | S1pr1 | 13609 | 1096355 | 0.97 | 0.6 | 0.15 | 0 | 0 | |
41 | 9 | Vascular6 | all | Gsn | 227753 | 95851 | 1.02 | 0.79 | 0.37 | 6.56e-301 | 1.25e-296 | |
41 | 9 | Vascular6 | all | Abcg2 | 26357 | 1347061 | 0.98 | 0.72 | 0.27 | 4.2e-289 | 8.03e-285 | |
41 | 9 | Vascular6 | all | Isg15 | 100038882 | 1855694 | 1.11 | 0.56 | 0.16 | 6.7e-289 | 1.28e-284 | |
41 | 9 | Vascular6 | all | Rtl8a | 66158 | 1913408 | 1 | 0.62 | 0.23 | 4.93e-260 | 9.43e-256 | |
41 | 9 | Vascular6 | all | Ifi27l2a | 76933 | 1924183 | 1.41 | 0.58 | 0.21 | 8.69e-227 | 1.66e-222 | |
41 | 9 | Vascular6 | all | Ccn2 | 14219 | 95537 | 1.54 | 0.35 | 0.08 | 4.22e-218 | 8.06e-214 | |
41 | 9 | Vascular6 | all | Glul | 14645 | 95739 | 1.09 | 0.68 | 0.34 | 2.61e-194 | 4.99e-190 | |
41 | 9 | Vascular6 | all | Hpgd | 15446 | 108085 | 1.13 | 0.43 | 0.14 | 2.47e-164 | 4.73e-160 |