Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 6 | Nephron9 | all | Umod | 22242 | 102674 | 4.17 | 0.99 | 0.25 | 0 | 0 | |
41 | 6 | Nephron9 | all | Slc12a1 | 20495 | 103150 | 3.87 | 1 | 0.08 | 0 | 0 | |
41 | 6 | Nephron9 | all | Egf | 13645 | 95290 | 3.65 | 0.98 | 0.11 | 0 | 0 | |
41 | 6 | Nephron9 | all | Wfdc15b | 192201 | 2445041 | 3.38 | 0.99 | 0.26 | 0 | 0 | |
41 | 6 | Nephron9 | all | Ppp1r1a | 58200 | 1889595 | 2.72 | 1 | 0.08 | 0 | 0 | |
41 | 6 | Nephron9 | all | Mt1 | 17748 | 97171 | 2.38 | 0.98 | 0.29 | 0 | 0 | |
41 | 6 | Nephron9 | all | Kng2 | 385643 | 3027157 | 2.35 | 0.98 | 0.1 | 0 | 0 | |
41 | 6 | Nephron9 | all | Sostdc1 | 66042 | 1913292 | 2.19 | 0.95 | 0.07 | 0 | 0 | |
41 | 6 | Nephron9 | all | Atp1a1 | 11928 | 88105 | 2.15 | 1 | 0.58 | 0 | 0 | |
41 | 6 | Nephron9 | all | Cldn10 | 58187 | 1913101 | 2.1 | 0.8 | 0.19 | 0 | 0 | |
41 | 6 | Nephron9 | all | Slc5a3 | 53881 | 1858226 | 1.7 | 0.91 | 0.19 | 0 | 0 | |
41 | 6 | Nephron9 | all | Ckb | 12709 | 88407 | 1.65 | 0.95 | 0.3 | 0 | 0 | |
41 | 6 | Nephron9 | all | Fabp3 | 14077 | 95476 | 1.64 | 0.9 | 0.11 | 0 | 0 | |
41 | 6 | Nephron9 | all | Nccrp1 | 233038 | 2685009 | 1.63 | 0.64 | 0.01 | 0 | 0 | |
41 | 6 | Nephron9 | all | Atp1b1 | 11931 | 88108 | 1.59 | 1 | 0.49 | 0 | 0 | |
41 | 6 | Nephron9 | all | Mt2 | 17750 | 97172 | 1.57 | 0.62 | 0.07 | 0 | 0 | |
41 | 6 | Nephron9 | all | Gpx6 | 75512 | 1922762 | 1.55 | 0.74 | 0.01 | 0 | 0 | |
41 | 6 | Nephron9 | all | Fxyd2 | 11936 | 1195260 | 1.51 | 1 | 0.63 | 0 | 0 | |
41 | 6 | Nephron9 | all | Ppp1r1b | 19049 | 94860 | 1.5 | 0.75 | 0.03 | 0 | 0 | |
41 | 6 | Nephron9 | all | COX3 | 17710 | 102502 | 1.5 | 1 | 1 | 0 | 0 | |
41 | 6 | Nephron9 | all | COX1 | 17708 | 102504 | 1.49 | 1 | 1 | 0 | 0 | |
41 | 6 | Nephron9 | all | ND3 | 17718 | 102499 | 1.48 | 0.99 | 0.67 | 0 | 0 | |
41 | 6 | Nephron9 | all | ATP6 | 17705 | 99927 | 1.47 | 1 | 1 | 0 | 0 | |
41 | 6 | Nephron9 | all | ND4 | 17719 | 102498 | 1.45 | 1 | 0.96 | 0 | 0 | |
41 | 6 | Nephron9 | all | CYTB | 17711 | 102501 | 1.43 | 1 | 0.99 | 0 | 0 | |
41 | 6 | Nephron9 | all | Klk1 | 16612 | 102850 | 1.43 | 0.85 | 0.27 | 0 | 0 | |
41 | 6 | Nephron9 | all | ND4L | 17720 | 102497 | 1.41 | 0.9 | 0.34 | 0 | 0 | |
41 | 6 | Nephron9 | all | COX2 | 17709 | 102503 | 1.4 | 1 | 0.99 | 0 | 0 | |
41 | 6 | Nephron9 | all | Nudt4 | 71207 | 1918457 | 1.38 | 0.93 | 0.24 | 0 | 0 | |
41 | 6 | Nephron9 | all | Dst | 13518 | 104627 | 1.35 | 0.86 | 0.2 | 0 | 0 | |
41 | 6 | Nephron9 | all | Cox7b | 66142 | 1913392 | 1.35 | 1 | 0.65 | 0 | 0 | |
41 | 6 | Nephron9 | all | Ptger3 | 19218 | 97795 | 1.35 | 0.64 | 0.02 | 0 | 0 | |
41 | 6 | Nephron9 | all | Atp5g1 | 11951 | 107653 | 1.33 | 1 | 0.71 | 0 | 0 | |
41 | 6 | Nephron9 | all | Wfdc2 | 67701 | 1914951 | 1.32 | 0.86 | 0.28 | 0 | 0 | |
41 | 6 | Nephron9 | all | Cox5b | 12859 | 88475 | 1.3 | 1 | 0.82 | 0 | 0 | |
41 | 6 | Nephron9 | all | Tmem72 | 319776 | 2442707 | 1.29 | 0.76 | 0.04 | 0 | 0 | |
41 | 6 | Nephron9 | all | Mrps6 | 121022 | 2153111 | 1.28 | 0.92 | 0.31 | 0 | 0 | |
41 | 6 | Nephron9 | all | ND1 | 17716 | 101787 | 1.28 | 1 | 0.99 | 0 | 0 | |
41 | 6 | Nephron9 | all | ND2 | 17717 | 102500 | 1.26 | 1 | 0.91 | 0 | 0 | |
41 | 6 | Nephron9 | all | Cyfip2 | 76884 | 1924134 | 1.25 | 0.79 | 0.15 | 0 | 0 | |
41 | 6 | Nephron9 | all | Mgst3 | 66447 | 1913697 | 1.25 | 0.94 | 0.42 | 0 | 0 | |
41 | 6 | Nephron9 | all | Kcnj1 | 56379 | 1927248 | 1.23 | 0.83 | 0.09 | 0 | 0 | |
41 | 6 | Nephron9 | all | Ldhb | 16832 | 96763 | 1.23 | 1 | 0.48 | 0 | 0 | |
41 | 6 | Nephron9 | all | Atp5k | 11958 | 106636 | 1.21 | 1 | 0.72 | 0 | 0 | |
41 | 6 | Nephron9 | all | Clcnka | 12733 | 1329026 | 1.21 | 0.66 | 0.03 | 0 | 0 | |
41 | 6 | Nephron9 | all | Lpl | 16956 | 96820 | 1.2 | 0.83 | 0.17 | 0 | 0 | |
41 | 6 | Nephron9 | all | Cox6c | 12864 | 104614 | 1.18 | 1 | 0.88 | 0 | 0 | |
41 | 6 | Nephron9 | all | Mfsd4a | 213006 | 2442786 | 1.18 | 0.72 | 0.07 | 0 | 0 | |
41 | 6 | Nephron9 | all | Idh2 | 269951 | 96414 | 1.18 | 0.95 | 0.45 | 0 | 0 | |
41 | 6 | Nephron9 | all | Cldn19 | 242653 | 3033992 | 1.18 | 0.7 | 0.05 | 0 | 0 |