Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 30 | Interstitial2 | all | Adamts5 | 23794 | 1346321 | 2.73 | 0.71 | 0.02 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Sfrp2 | 20319 | 108078 | 2.69 | 0.44 | 0 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Fhl2 | 14200 | 1338762 | 2.44 | 0.9 | 0.03 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Serping1 | 12258 | 894696 | 2.29 | 0.76 | 0.02 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Des | 13346 | 94885 | 1.98 | 0.71 | 0.02 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Lhfp | 108927 | 1920048 | 1.97 | 0.79 | 0.03 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Olfml3 | 99543 | 1914877 | 1.85 | 0.42 | 0.01 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Col1a2 | 12843 | 88468 | 1.74 | 0.56 | 0.01 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Gucy1a1 | 60596 | 1926562 | 1.62 | 0.71 | 0.02 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Pdgfrb | 18596 | 97531 | 1.59 | 0.69 | 0.02 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Pdgfra | 18595 | 97530 | 1.48 | 0.56 | 0 | 0 | 0 | |
41 | 30 | Interstitial2 | all | Tcf21 | 21412 | 1202715 | 2.17 | 0.44 | 0.01 | 4.06e-275 | 7.76e-271 | |
41 | 30 | Interstitial2 | all | Itga8 | 241226 | 109442 | 1.71 | 0.58 | 0.02 | 1.17e-263 | 2.24e-259 | |
41 | 30 | Interstitial2 | all | Myl9 | 98932 | 2138915 | 2.11 | 0.93 | 0.05 | 7.51e-248 | 1.44e-243 | |
41 | 30 | Interstitial2 | all | Ptn | 19242 | 97804 | 2.95 | 0.46 | 0.01 | 2.64e-238 | 5.04e-234 | |
41 | 30 | Interstitial2 | all | Ifitm1 | 68713 | 1915963 | 2.13 | 0.39 | 0.01 | 4.57e-216 | 8.75e-212 | |
41 | 30 | Interstitial2 | all | Rarres2 | 71660 | 1918910 | 1.97 | 0.75 | 0.04 | 7.04e-189 | 1.35e-184 | |
41 | 30 | Interstitial2 | all | Agtr1a | 11607 | 87964 | 1.82 | 0.67 | 0.04 | 6.98e-172 | 1.34e-167 | |
41 | 30 | Interstitial2 | all | Mgp | 17313 | 96976 | 3.51 | 0.65 | 0.04 | 2.17e-170 | 4.15e-166 | |
41 | 30 | Interstitial2 | all | Lrp1 | 16971 | 96828 | 1.39 | 0.64 | 0.04 | 4.17e-166 | 7.97e-162 | |
41 | 30 | Interstitial2 | all | Dcn | 13179 | 94872 | 2.68 | 0.29 | 0.01 | 7.96e-137 | 1.52e-132 | |
41 | 30 | Interstitial2 | all | Rcn3 | 52377 | 1277122 | 1.52 | 0.72 | 0.06 | 2.01e-120 | 3.84e-116 | |
41 | 30 | Interstitial2 | all | Aebp1 | 11568 | 1197012 | 1.8 | 0.65 | 0.05 | 5.04e-119 | 9.64e-115 | |
41 | 30 | Interstitial2 | all | Ccn2 | 14219 | 95537 | 3.19 | 0.82 | 0.09 | 3.13e-114 | 5.99e-110 | |
41 | 30 | Interstitial2 | all | Ecm1 | 13601 | 103060 | 2.47 | 0.74 | 0.08 | 3.08e-109 | 5.9e-105 | |
41 | 30 | Interstitial2 | all | Emilin1 | 100952 | 1926189 | 1.52 | 0.67 | 0.06 | 3.71e-106 | 7.09e-102 | |
41 | 30 | Interstitial2 | all | Serpini1 | 20713 | 1194506 | 1.39 | 0.44 | 0.03 | 1.3e-104 | 2.48e-100 | |
41 | 30 | Interstitial2 | all | Rasl11a | 68895 | 1916145 | 1.76 | 0.72 | 0.08 | 2.13e-103 | 4.07e-99 | |
41 | 30 | Interstitial2 | all | Bgn | 12111 | 88158 | 2.25 | 0.93 | 0.15 | 5.25e-93 | 1e-88 | |
41 | 30 | Interstitial2 | all | Cfh | 12628 | 88385 | 2.77 | 0.72 | 0.09 | 5.48e-93 | 1.05e-88 | |
41 | 30 | Interstitial2 | all | Gpc3 | 14734 | 104903 | 1.39 | 0.46 | 0.03 | 3.71e-92 | 7.09e-88 | |
41 | 30 | Interstitial2 | all | Cxcl14 | 57266 | 1888514 | 1.74 | 0.31 | 0.02 | 1.45e-89 | 2.78e-85 | |
41 | 30 | Interstitial2 | all | Serpine2 | 20720 | 101780 | 2.69 | 0.83 | 0.12 | 2.46e-89 | 4.7e-85 | |
41 | 30 | Interstitial2 | all | Rasgrp2 | 19395 | 1333849 | 1.58 | 0.78 | 0.1 | 4.57e-88 | 8.74e-84 | |
41 | 30 | Interstitial2 | all | Mxra8 | 74761 | 1922011 | 1.4 | 0.72 | 0.09 | 1.45e-82 | 2.78e-78 | |
41 | 30 | Interstitial2 | all | Cxcl12 | 20315 | 103556 | 3.09 | 0.46 | 0.04 | 3.17e-82 | 6.06e-78 | |
41 | 30 | Interstitial2 | all | Pdlim2 | 213019 | 2384850 | 1.39 | 0.64 | 0.08 | 1.14e-72 | 2.17e-68 | |
41 | 30 | Interstitial2 | all | Lbh | 77889 | 1925139 | 1.39 | 0.76 | 0.12 | 5.96e-70 | 1.14e-65 | |
41 | 30 | Interstitial2 | all | Dkk2 | 56811 | 1890663 | 1.76 | 0.64 | 0.09 | 4.77e-65 | 9.12e-61 | |
41 | 30 | Interstitial2 | all | Fbln5 | 23876 | 1346091 | 2.5 | 0.46 | 0.05 | 1.84e-61 | 3.53e-57 | |
41 | 30 | Interstitial2 | all | Cald1 | 109624 | 88250 | 1.87 | 0.97 | 0.29 | 4.39e-58 | 8.39e-54 | |
41 | 30 | Interstitial2 | all | Mfge8 | 17304 | 102768 | 2.03 | 0.93 | 0.27 | 6.1e-51 | 1.17e-46 | |
41 | 30 | Interstitial2 | all | Pcolce | 18542 | 105099 | 1.45 | 0.64 | 0.11 | 1.15e-50 | 2.19e-46 | |
41 | 30 | Interstitial2 | all | Sept4 | 18952 | 1270156 | 1.68 | 0.75 | 0.18 | 2.22e-45 | 4.25e-41 | |
41 | 30 | Interstitial2 | all | Nr2f2 | 11819 | 1352452 | 1.46 | 0.81 | 0.23 | 1.37e-42 | 2.62e-38 | |
41 | 30 | Interstitial2 | all | Hsd11b1 | 15483 | 103562 | 2.31 | 0.42 | 0.06 | 9.87e-42 | 1.89e-37 | |
41 | 30 | Interstitial2 | all | Dpep1 | 13479 | 94917 | 1.79 | 0.43 | 0.06 | 6.15e-41 | 1.18e-36 | |
41 | 30 | Interstitial2 | all | Igfbp7 | 29817 | 1352480 | 1.55 | 0.89 | 0.44 | 5.32e-32 | 1.02e-27 | |
41 | 30 | Interstitial2 | all | Igfbp5 | 16011 | 96440 | 1.7 | 0.85 | 0.3 | 3.42e-30 | 6.54e-26 | |
41 | 30 | Interstitial2 | all | Gsn | 227753 | 95851 | 2.35 | 0.83 | 0.39 | 1.23e-24 | 2.35e-20 |