Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41 | 28 | Immune7 | all | Alas2 | 11656 | 87990 | 1.92 | 0.31 | 0 | 0 | 0 | |
| 41 | 28 | Immune7 | all | Snca | 20617 | 1277151 | 1.09 | 0.28 | 0.02 | 4.75E-113 | 9.08E-109 | |
| 41 | 28 | Immune7 | all | Adgre1 | 13733 | 106912 | 0.83 | 0.59 | 0.11 | 1.78E-56 | 3.41E-52 | |
| 41 | 28 | Immune7 | all | Lilra5 | 232801 | 3647196 | 0.69 | 0.57 | 0.11 | 1.04E-51 | 2.0E-47 | |
| 41 | 28 | Immune7 | all | Pf4 | 56744 | 1888711 | 0.61 | 0.36 | 0.05 | 2.54E-50 | 4.86E-46 | |
| 41 | 28 | Immune7 | all | Hbb-bt | 101488143 | 5474850 | 4.87 | 0.4 | 0.07 | 9.44E-50 | 1.81E-45 | |
| 41 | 28 | Immune7 | all | Fcgr3 | 14131 | 95500 | 0.74 | 0.62 | 0.14 | 3.3E-48 | 6.32E-44 | |
| 41 | 28 | Immune7 | all | C3ar1 | 12267 | 1097680 | 0.59 | 0.46 | 0.08 | 4.4E-47 | 8.42E-43 | |
| 41 | 28 | Immune7 | all | C5ar1 | 12273 | 88232 | 0.59 | 0.49 | 0.09 | 9.94E-47 | 1.9E-42 | |
| 41 | 28 | Immune7 | all | Rgs10 | 67865 | 1915115 | 0.75 | 0.61 | 0.15 | 1.15E-43 | 2.2E-39 | |
| 41 | 28 | Immune7 | all | Mgl2 | 216864 | 2385729 | 0.73 | 0.55 | 0.12 | 8.72E-43 | 1.67E-38 | |
| 41 | 28 | Immune7 | all | Cd14 | 12475 | 88318 | 0.83 | 0.65 | 0.17 | 1.0E-42 | 1.92E-38 | |
| 41 | 28 | Immune7 | all | C1qa | 12259 | 88223 | 1.16 | 0.73 | 0.22 | 1.02E-42 | 1.96E-38 | |
| 41 | 28 | Immune7 | all | P2ry6 | 233571 | 2673874 | 0.66 | 0.55 | 0.12 | 2.02E-42 | 3.87E-38 | |
| 41 | 28 | Immune7 | all | C1qc | 12262 | 88225 | 1.09 | 0.69 | 0.2 | 3.53E-41 | 6.75E-37 | |
| 41 | 28 | Immune7 | all | Hba-a2 | 110257 | 96016 | 5.21 | 0.52 | 0.13 | 5.79E-41 | 1.11E-36 | |
| 41 | 28 | Immune7 | all | Ms4a7 | 109225 | 1918846 | 0.71 | 0.46 | 0.09 | 1.38E-40 | 2.65E-36 | |
| 41 | 28 | Immune7 | all | Cybb | 13058 | 88574 | 0.6 | 0.58 | 0.14 | 3.98E-40 | 7.61E-36 | |
| 41 | 28 | Immune7 | all | Csf1r | 12978 | 1339758 | 0.69 | 0.61 | 0.16 | 1.71E-39 | 3.27E-35 | |
| 41 | 28 | Immune7 | all | Trf | 22041 | 98821 | 0.78 | 0.6 | 0.16 | 3.66E-39 | 7.0E-35 | |
| 41 | 28 | Immune7 | all | Cd68 | 12514 | 88342 | 0.6 | 0.56 | 0.14 | 1.4E-37 | 2.68E-33 | |
| 41 | 28 | Immune7 | all | Cx3cr1 | 13051 | 1333815 | 0.68 | 0.45 | 0.1 | 2.52E-37 | 4.83E-33 | |
| 41 | 28 | Immune7 | all | Bcl2a1b | 12045 | 1278326 | 0.59 | 0.46 | 0.1 | 3.48E-37 | 6.65E-33 | |
| 41 | 28 | Immune7 | all | Cd72 | 12517 | 88345 | 0.74 | 0.57 | 0.15 | 1.49E-36 | 2.84E-32 | |
| 41 | 28 | Immune7 | all | Ube2l6 | 56791 | 1914500 | 0.81 | 0.53 | 0.14 | 5.41E-36 | 1.03E-31 | |
| 41 | 28 | Immune7 | all | C1qb | 12260 | 88224 | 1.13 | 0.69 | 0.23 | 5.66E-35 | 1.08E-30 | |
| 41 | 28 | Immune7 | all | Ctsc | 13032 | 109553 | 0.75 | 0.66 | 0.21 | 1.61E-34 | 3.08E-30 | |
| 41 | 28 | Immune7 | all | Aif1 | 11629 | 1343098 | 0.66 | 0.48 | 0.12 | 3.11E-33 | 5.95E-29 | |
| 41 | 28 | Immune7 | all | Hpgd | 15446 | 108085 | 0.68 | 0.55 | 0.15 | 4.56E-33 | 8.72E-29 | |
| 41 | 28 | Immune7 | all | Ctss | 13040 | 107341 | 0.85 | 0.7 | 0.23 | 5.05E-33 | 9.67E-29 | |
| 41 | 28 | Immune7 | all | Ly86 | 17084 | 1321404 | 0.56 | 0.59 | 0.16 | 5.74E-33 | 1.1E-28 | |
| 41 | 28 | Immune7 | all | Tyrobp | 22177 | 1277211 | 0.75 | 0.7 | 0.23 | 2.78E-32 | 5.31E-28 | |
| 41 | 28 | Immune7 | all | H2-DMa | 14998 | 95921 | 0.65 | 0.68 | 0.22 | 2.52E-30 | 4.83E-26 | |
| 41 | 28 | Immune7 | all | Unc93b1 | 54445 | 1859307 | 0.59 | 0.7 | 0.24 | 2.56E-30 | 4.9E-26 | |
| 41 | 28 | Immune7 | all | Hba-a1 | 15122 | 96015 | 5.23 | 0.5 | 0.16 | 4.0E-30 | 7.66E-26 | |
| 41 | 28 | Immune7 | all | Laptm5 | 16792 | 108046 | 0.63 | 0.69 | 0.23 | 4.3E-29 | 8.23E-25 | |
| 41 | 28 | Immune7 | all | Lyz2 | 17105 | 96897 | 1.02 | 0.71 | 0.3 | 1.39E-28 | 2.66E-24 | |
| 41 | 28 | Immune7 | all | Fcer1g | 14127 | 95496 | 0.89 | 0.69 | 0.25 | 1.76E-28 | 3.37E-24 | |
| 41 | 28 | Immune7 | all | Wfdc17 | 100034251 | 3649773 | 0.59 | 0.47 | 0.13 | 1.62E-26 | 3.1E-22 | |
| 41 | 28 | Immune7 | all | H2-DMb1 | 14999 | 95922 | 0.65 | 0.69 | 0.27 | 6.47E-26 | 1.24E-21 | |
| 41 | 28 | Immune7 | all | H2-Eb1 | 14969 | 95901 | 0.94 | 0.84 | 0.44 | 3.58E-24 | 6.85E-20 | |
| 41 | 28 | Immune7 | all | Fcgr2b | 14130 | 95499 | 0.58 | 0.48 | 0.15 | 8.63E-24 | 1.65E-19 | |
| 41 | 28 | Immune7 | all | Apoe | 11816 | 88057 | 0.9 | 0.99 | 0.69 | 1.84E-23 | 3.52E-19 | |
| 41 | 28 | Immune7 | all | H2-Aa | 14960 | 95895 | 0.96 | 0.85 | 0.46 | 1.98E-22 | 3.79E-18 | |
| 41 | 28 | Immune7 | all | Hbb-bs | 100503605 | 5474852 | 5.28 | 0.69 | 0.35 | 5.3E-21 | 1.01E-16 | |
| 41 | 28 | Immune7 | all | Cd74 | 16149 | 96534 | 0.98 | 0.94 | 0.64 | 5.48E-20 | 1.05E-15 | |
| 41 | 28 | Immune7 | all | H2-Ab1 | 14961 | 103070 | 0.93 | 0.93 | 0.64 | 6.48E-18 | 1.24E-13 | |
| 41 | 28 | Immune7 | all | Bpgm | 12183 | 1098242 | 0.96 | 0.34 | 0.14 | 5.53E-13 | 1.06E-8 | |
| 41 | 28 | Immune7 | all | Ctsb | 13030 | 88561 | 0.58 | 0.84 | 0.64 | 4.79E-12 | 9.17E-8 | |
| 41 | 28 | Immune7 | all | Cst3 | 13010 | 102519 | 0.71 | 1 | 0.93 | 1.2E-11 | 2.3E-7 |