Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41 | 27 | Nephron7 | all | Lypd2 | 68311 | 1915561 | 2.2 | 0.35 | 0.01 | 0 | 0 | |
| 41 | 27 | Nephron7 | all | Bst1 | 12182 | 105370 | 1.87 | 0.84 | 0.08 | 0 | 0 | |
| 41 | 27 | Nephron7 | all | Fst | 14313 | 95586 | 1.71 | 0.39 | 0 | 0 | 0 | |
| 41 | 27 | Nephron7 | all | Ankrd1 | 107765 | 1097717 | 1.28 | 0.4 | 0.01 | 0 | 0 | |
| 41 | 27 | Nephron7 | all | Agt | 11606 | 87963 | 1.14 | 0.46 | 0.02 | 0 | 0 | |
| 41 | 27 | Nephron7 | all | Cp | 12870 | 88476 | 0.93 | 0.5 | 0.03 | 7.2E-243 | 1.38E-238 | |
| 41 | 27 | Nephron7 | all | Slc4a11 | 269356 | 2138987 | 1.63 | 0.6 | 0.05 | 3.85E-230 | 7.36E-226 | |
| 41 | 27 | Nephron7 | all | Proser2 | 227545 | 2442238 | 0.97 | 0.61 | 0.08 | 5.06E-143 | 9.68E-139 | |
| 41 | 27 | Nephron7 | all | Bdh2 | 69772 | 1917022 | 1.33 | 0.84 | 0.17 | 6.28E-132 | 1.2E-127 | |
| 41 | 27 | Nephron7 | all | Tshz2 | 228911 | 2153084 | 1.06 | 0.8 | 0.19 | 7.31E-101 | 1.4E-96 | |
| 41 | 27 | Nephron7 | all | Elovl7 | 74559 | 1921809 | 1.14 | 0.82 | 0.22 | 1.11E-97 | 2.12E-93 | |
| 41 | 27 | Nephron7 | all | Apela | 100038489 | 3642370 | 1.33 | 0.89 | 0.25 | 1.09E-96 | 2.08E-92 | |
| 41 | 27 | Nephron7 | all | Epcam | 17075 | 106653 | 1.07 | 0.89 | 0.27 | 1.71E-86 | 3.27E-82 | |
| 41 | 27 | Nephron7 | all | Gdf15 | 23886 | 1346047 | 1.03 | 0.32 | 0.04 | 3.06E-86 | 5.85E-82 | |
| 41 | 27 | Nephron7 | all | Kcnk1 | 16525 | 109322 | 1.22 | 0.66 | 0.16 | 5.46E-86 | 1.04E-81 | |
| 41 | 27 | Nephron7 | all | Spp1 | 20750 | 98389 | 2.34 | 0.92 | 0.41 | 3.86E-82 | 7.38E-78 | |
| 41 | 27 | Nephron7 | all | Pax8 | 18510 | 97492 | 0.94 | 0.78 | 0.23 | 5.76E-77 | 1.1E-72 | |
| 41 | 27 | Nephron7 | all | Csrp2 | 13008 | 1202907 | 1.17 | 0.84 | 0.31 | 7.99E-77 | 1.53E-72 | |
| 41 | 27 | Nephron7 | all | Galnt18 | 233733 | 2446239 | 0.87 | 0.62 | 0.15 | 3.11E-76 | 5.96E-72 | |
| 41 | 27 | Nephron7 | all | Ackr3 | 12778 | 109562 | 1.21 | 0.53 | 0.11 | 3.41E-76 | 6.53E-72 | |
| 41 | 27 | Nephron7 | all | Bicc1 | 83675 | 1933388 | 1.04 | 0.75 | 0.23 | 8.21E-75 | 1.57E-70 | |
| 41 | 27 | Nephron7 | all | Zfyve21 | 68520 | 1915770 | 0.96 | 0.67 | 0.19 | 3.05E-74 | 5.84E-70 | |
| 41 | 27 | Nephron7 | all | Pcolce | 18542 | 105099 | 1.06 | 0.53 | 0.11 | 3.44E-74 | 6.58E-70 | |
| 41 | 27 | Nephron7 | all | Lrrcc1 | 71710 | 1918960 | 0.94 | 0.46 | 0.09 | 1.54E-68 | 2.95E-64 | |
| 41 | 27 | Nephron7 | all | Snhg18 | 100616095 | 1914085 | 1.02 | 0.79 | 0.27 | 3.58E-68 | 6.84E-64 | |
| 41 | 27 | Nephron7 | all | Ndufb8 | 67264 | 1914514 | 1.09 | 0.98 | 0.73 | 1.49E-66 | 2.84E-62 | |
| 41 | 27 | Nephron7 | all | Ifit3 | 15959 | 1101055 | 1.57 | 0.71 | 0.22 | 1.29E-65 | 2.47E-61 | |
| 41 | 27 | Nephron7 | all | 1700016C15Rik | 69428 | 1916678 | 1.01 | 0.44 | 0.09 | 1.73E-65 | 3.31E-61 | |
| 41 | 27 | Nephron7 | all | Ifit3b | 667370 | 3698419 | 1.53 | 0.57 | 0.14 | 1.92E-65 | 3.67E-61 | |
| 41 | 27 | Nephron7 | all | Atpif1 | 11983 | 1196457 | 0.95 | 1 | 0.74 | 4.13E-65 | 7.89E-61 | |
| 41 | 27 | Nephron7 | all | Pkhd1 | 241035 | 2155808 | 0.89 | 0.65 | 0.19 | 5.06E-65 | 9.69E-61 | |
| 41 | 27 | Nephron7 | all | Angpt2 | 11601 | 1202890 | 1.63 | 0.51 | 0.12 | 1.86E-63 | 3.56E-59 | |
| 41 | 27 | Nephron7 | all | Mpc2 | 70456 | 1917706 | 0.98 | 0.97 | 0.6 | 3.46E-63 | 6.61E-59 | |
| 41 | 27 | Nephron7 | all | ccdc198 | 67082 | 1914332 | 0.88 | 0.79 | 0.27 | 3.65E-63 | 6.99E-59 | |
| 41 | 27 | Nephron7 | all | Col18a1 | 12822 | 88451 | 0.89 | 0.76 | 0.26 | 7.03E-61 | 1.35E-56 | |
| 41 | 27 | Nephron7 | all | Tceal9 | 22381 | 109567 | 1.03 | 0.92 | 0.49 | 6.38E-57 | 1.22E-52 | |
| 41 | 27 | Nephron7 | all | Nceh1 | 320024 | 2443191 | 0.93 | 0.67 | 0.22 | 7.02E-57 | 1.34E-52 | |
| 41 | 27 | Nephron7 | all | Atp1b1 | 11931 | 88108 | 1.07 | 0.97 | 0.51 | 1.04E-56 | 1.99E-52 | |
| 41 | 27 | Nephron7 | all | Adgrg1 | 14766 | 1340051 | 0.9 | 0.81 | 0.32 | 3.48E-56 | 6.66E-52 | |
| 41 | 27 | Nephron7 | all | Arrdc3 | 105171 | 2145242 | 0.93 | 0.51 | 0.14 | 6.89E-53 | 1.32E-48 | |
| 41 | 27 | Nephron7 | all | Npnt | 114249 | 2148811 | 1.13 | 0.66 | 0.23 | 1.72E-52 | 3.29E-48 | |
| 41 | 27 | Nephron7 | all | Sdc4 | 20971 | 1349164 | 0.93 | 0.87 | 0.42 | 6.57E-52 | 1.26E-47 | |
| 41 | 27 | Nephron7 | all | Cox7a1 | 12865 | 1316714 | 1.42 | 0.52 | 0.15 | 8.0E-52 | 1.53E-47 | |
| 41 | 27 | Nephron7 | all | Aqp1 | 11826 | 103201 | 1.4 | 0.67 | 0.26 | 1.99E-50 | 3.81E-46 | |
| 41 | 27 | Nephron7 | all | Tspan8 | 216350 | 2384918 | 1.29 | 0.63 | 0.23 | 7.09E-44 | 1.36E-39 | |
| 41 | 27 | Nephron7 | all | Thbs1 | 21825 | 98737 | 0.86 | 0.42 | 0.12 | 1.75E-40 | 3.34E-36 | |
| 41 | 27 | Nephron7 | all | Enpp2 | 18606 | 1321390 | 1.01 | 0.45 | 0.14 | 2.04E-40 | 3.9E-36 | |
| 41 | 27 | Nephron7 | all | Car14 | 23831 | 1344341 | 1.31 | 0.31 | 0.08 | 5.17E-31 | 9.89E-27 | |
| 41 | 27 | Nephron7 | all | Hist1h1c | 50708 | 1931526 | 1 | 0.59 | 0.28 | 4.04E-26 | 7.73E-22 | |
| 41 | 27 | Nephron7 | all | Gstm1 | 14862 | 95860 | 1.26 | 0.7 | 0.53 | 5.73E-14 | 1.1E-9 |