Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 26 | Nephron6 | all | Msmp | 100039672 | 3652339 | 2.42 | 0.36 | 0.02 | 0 | 0 | |
41 | 26 | Nephron6 | all | C3 | 12266 | 88227 | 2.16 | 0.65 | 0.01 | 0 | 0 | |
41 | 26 | Nephron6 | all | Cp | 12870 | 88476 | 2.09 | 0.86 | 0.03 | 0 | 0 | |
41 | 26 | Nephron6 | all | Rasl11a | 68895 | 1916145 | 1.88 | 0.74 | 0.07 | 0 | 0 | |
41 | 26 | Nephron6 | all | Aebp1 | 11568 | 1197012 | 1.79 | 0.74 | 0.05 | 0 | 0 | |
41 | 26 | Nephron6 | all | Akap12 | 83397 | 1932576 | 1.74 | 0.78 | 0.09 | 0 | 0 | |
41 | 26 | Nephron6 | all | Pcp4 | 18546 | 97509 | 1.59 | 0.34 | 0.01 | 0 | 0 | |
41 | 26 | Nephron6 | all | Ncam1 | 17967 | 97281 | 1.56 | 0.7 | 0.02 | 0 | 0 | |
41 | 26 | Nephron6 | all | Cpe | 12876 | 101932 | 1.36 | 0.6 | 0.04 | 0 | 0 | |
41 | 26 | Nephron6 | all | Stc2 | 20856 | 1316731 | 1.34 | 0.65 | 0.01 | 0 | 0 | |
41 | 26 | Nephron6 | all | Fxyd1 | 56188 | 1889273 | 1.32 | 0.49 | 0.03 | 0 | 0 | |
41 | 26 | Nephron6 | all | Fhl2 | 14200 | 1338762 | 1.31 | 0.58 | 0.03 | 0 | 0 | |
41 | 26 | Nephron6 | all | Ankrd1 | 107765 | 1097717 | 1.18 | 0.42 | 0.01 | 0 | 0 | |
41 | 26 | Nephron6 | all | Lbp | 16803 | 1098776 | 1.16 | 0.55 | 0.03 | 0 | 0 | |
41 | 26 | Nephron6 | all | Mmp23 | 26561 | 1347361 | 1.15 | 0.53 | 0 | 0 | 0 | |
41 | 26 | Nephron6 | all | Gpc3 | 14734 | 104903 | 1.09 | 0.56 | 0.03 | 0 | 0 | |
41 | 26 | Nephron6 | all | Angptl2 | 26360 | 1347002 | 1.09 | 0.38 | 0.01 | 0 | 0 | |
41 | 26 | Nephron6 | all | Mme | 17380 | 97004 | 1.03 | 0.64 | 0.06 | 0 | 0 | |
41 | 26 | Nephron6 | all | Wt1 | 22431 | 98968 | 1.02 | 0.45 | 0 | 0 | 0 | |
41 | 26 | Nephron6 | all | Dcdc2a | 195208 | 2652818 | 1.02 | 0.53 | 0.04 | 0 | 0 | |
41 | 26 | Nephron6 | all | Osr2 | 107587 | 1930813 | 1 | 0.55 | 0.05 | 1.06e-295 | 2.03e-291 | |
41 | 26 | Nephron6 | all | Clu | 12759 | 88423 | 1.53 | 0.81 | 0.11 | 2.66e-291 | 5.09e-287 | |
41 | 26 | Nephron6 | all | Palld | 72333 | 1919583 | 1.05 | 0.56 | 0.05 | 3.05e-289 | 5.82e-285 | |
41 | 26 | Nephron6 | all | Ccn1 | 16007 | 88613 | 1.6 | 0.63 | 0.08 | 4.21e-230 | 8.05e-226 | |
41 | 26 | Nephron6 | all | Rbp1 | 19659 | 97876 | 1.05 | 0.57 | 0.06 | 6.61e-228 | 1.26e-223 | |
41 | 26 | Nephron6 | all | Ltbp3 | 16998 | 1101355 | 1.04 | 0.52 | 0.06 | 2.19e-219 | 4.19e-215 | |
41 | 26 | Nephron6 | all | Col18a1 | 12822 | 88451 | 1.78 | 0.93 | 0.25 | 2.67e-205 | 5.1e-201 | |
41 | 26 | Nephron6 | all | Efemp1 | 216616 | 1339998 | 1.44 | 0.76 | 0.16 | 6.68e-179 | 1.28e-174 | |
41 | 26 | Nephron6 | all | Rasl11b | 68939 | 1916189 | 1.57 | 0.74 | 0.15 | 1.88e-175 | 3.6e-171 | |
41 | 26 | Nephron6 | all | Timp2 | 21858 | 98753 | 1.06 | 0.7 | 0.13 | 1.13e-166 | 2.16e-162 | |
41 | 26 | Nephron6 | all | Dag1 | 13138 | 101864 | 1.33 | 0.87 | 0.25 | 9.11e-161 | 1.74e-156 | |
41 | 26 | Nephron6 | all | Ackr3 | 12778 | 109562 | 1.06 | 0.6 | 0.11 | 1.16e-148 | 2.23e-144 | |
41 | 26 | Nephron6 | all | Bdh2 | 69772 | 1917022 | 1 | 0.77 | 0.17 | 1.09e-143 | 2.09e-139 | |
41 | 26 | Nephron6 | all | Nr2f2 | 11819 | 1352452 | 1.29 | 0.81 | 0.23 | 2.93e-138 | 5.6e-134 | |
41 | 26 | Nephron6 | all | Ptgds | 19215 | 99261 | 1.19 | 0.3 | 0.03 | 5.15e-138 | 9.85e-134 | |
41 | 26 | Nephron6 | all | Spp1 | 20750 | 98389 | 1.68 | 0.92 | 0.41 | 2.16e-129 | 4.13e-125 | |
41 | 26 | Nephron6 | all | Tagln | 21345 | 106012 | 1.05 | 0.32 | 0.03 | 1.06e-128 | 2.03e-124 | |
41 | 26 | Nephron6 | all | Igfbp7 | 29817 | 1352480 | 1.46 | 0.96 | 0.44 | 1.04e-127 | 1.98e-123 | |
41 | 26 | Nephron6 | all | ccdc198 | 67082 | 1914332 | 1.25 | 0.8 | 0.27 | 9.55e-113 | 1.83e-108 | |
41 | 26 | Nephron6 | all | Ctsl | 13039 | 88564 | 1.32 | 0.97 | 0.55 | 3.83e-110 | 7.33e-106 | |
41 | 26 | Nephron6 | all | Slc6a6 | 21366 | 98488 | 1.44 | 0.93 | 0.46 | 1.54e-108 | 2.94e-104 | |
41 | 26 | Nephron6 | all | Col4a1 | 12826 | 88454 | 1.29 | 0.81 | 0.29 | 6.41e-103 | 1.23e-98 | |
41 | 26 | Nephron6 | all | Cpq | 54381 | 1889205 | 1.01 | 0.67 | 0.2 | 8.81e-100 | 1.68e-95 | |
41 | 26 | Nephron6 | all | Gstm1 | 14862 | 95860 | 1.56 | 0.9 | 0.53 | 4.9e-97 | 9.36e-93 | |
41 | 26 | Nephron6 | all | Tmsb10 | 19240 | 109146 | 1.01 | 0.99 | 0.64 | 1.25e-94 | 2.4e-90 | |
41 | 26 | Nephron6 | all | Tsc22d1 | 21807 | 109127 | 1.34 | 0.95 | 0.53 | 9.46e-90 | 1.81e-85 | |
41 | 26 | Nephron6 | all | Gstm5 | 14866 | 1309466 | 1.09 | 0.63 | 0.2 | 5.44e-86 | 1.04e-81 | |
41 | 26 | Nephron6 | all | Enpep | 13809 | 106645 | 1.04 | 0.62 | 0.17 | 3.84e-76 | 7.34e-72 | |
41 | 26 | Nephron6 | all | Gstm2 | 14863 | 95861 | 1.17 | 0.74 | 0.28 | 6.1e-72 | 1.17e-67 | |
41 | 26 | Nephron6 | all | Spink1 | 20730 | 106202 | 0.99 | 0.49 | 0.22 | 5.06e-24 | 9.68e-20 |