Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 23 | Ureteric epithelium3 | all | Krt15 | 16665 | 96689 | 2.33 | 0.29 | 0 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Krt19 | 16669 | 96693 | 2.27 | 0.88 | 0.02 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Fxyd3 | 17178 | 107497 | 2.06 | 0.55 | 0.01 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Gsdmc2 | 331063 | 2146102 | 1.68 | 0.51 | 0.01 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Krt18 | 16668 | 96692 | 1.63 | 0.95 | 0.2 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Calml3 | 70405 | 1917655 | 1.63 | 0.56 | 0.02 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Perp | 64058 | 1929938 | 1.51 | 0.87 | 0.11 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Gsto1 | 14873 | 1342273 | 1.49 | 0.8 | 0.13 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Slc12a2 | 20496 | 101924 | 1.42 | 0.8 | 0.09 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Psca | 72373 | 1919623 | 1.41 | 0.34 | 0.01 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Gsdmc3 | 270328 | 3580656 | 1.34 | 0.44 | 0 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Lamb3 | 16780 | 99915 | 1.33 | 0.79 | 0.05 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Phlda3 | 27280 | 1351485 | 1.22 | 0.68 | 0.05 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Msln | 56047 | 1888992 | 1.17 | 0.56 | 0 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Sdc1 | 20969 | 1349162 | 1.17 | 0.56 | 0.03 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Cpe | 12876 | 101932 | 1.16 | 0.62 | 0.04 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Gata3 | 14462 | 95663 | 1.15 | 0.89 | 0.14 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Krt5 | 110308 | 96702 | 1.14 | 0.31 | 0 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Serinc2 | 230779 | 1919132 | 1.14 | 0.75 | 0.09 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Upk1b | 22268 | 98912 | 1.06 | 0.41 | 0 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Cbr2 | 12409 | 107200 | 1.03 | 0.41 | 0.01 | 0 | 0 | |
41 | 23 | Ureteric epithelium3 | all | Tmprss2 | 50528 | 1354381 | 1.24 | 0.89 | 0.17 | 9.37e-307 | 1.79e-302 | |
41 | 23 | Ureteric epithelium3 | all | Tacstd2 | 56753 | 1861606 | 1.61 | 0.96 | 0.21 | 5.81e-305 | 1.11e-300 | |
41 | 23 | Ureteric epithelium3 | all | Krt8 | 16691 | 96705 | 1.41 | 0.92 | 0.22 | 3.1e-288 | 5.94e-284 | |
41 | 23 | Ureteric epithelium3 | all | Efemp1 | 216616 | 1339998 | 1.3 | 0.81 | 0.16 | 4e-270 | 7.66e-266 | |
41 | 23 | Ureteric epithelium3 | all | Spp1 | 20750 | 98389 | 3.76 | 0.99 | 0.41 | 2.55e-262 | 4.87e-258 | |
41 | 23 | Ureteric epithelium3 | all | S100a6 | 20200 | 1339467 | 2.06 | 1 | 0.43 | 5.82e-240 | 1.11e-235 | |
41 | 23 | Ureteric epithelium3 | all | Hspa4l | 18415 | 107422 | 1 | 0.66 | 0.11 | 2.01e-233 | 3.85e-229 | |
41 | 23 | Ureteric epithelium3 | all | Plet1 | 76509 | 1923759 | 1.19 | 0.92 | 0.21 | 1.4e-225 | 2.68e-221 | |
41 | 23 | Ureteric epithelium3 | all | Cdh1 | 12550 | 88354 | 1.19 | 0.85 | 0.2 | 6.33e-218 | 1.21e-213 | |
41 | 23 | Ureteric epithelium3 | all | Gstm2 | 14863 | 95861 | 1.22 | 0.97 | 0.28 | 2.13e-207 | 4.07e-203 | |
41 | 23 | Ureteric epithelium3 | all | Gstm1 | 14862 | 95860 | 1.97 | 0.99 | 0.52 | 4.71e-206 | 9.01e-202 | |
41 | 23 | Ureteric epithelium3 | all | Tgm2 | 21817 | 98731 | 1.17 | 0.81 | 0.19 | 1.28e-205 | 2.45e-201 | |
41 | 23 | Ureteric epithelium3 | all | Krt7 | 110310 | 96704 | 1.23 | 0.91 | 0.25 | 2.31e-203 | 4.42e-199 | |
41 | 23 | Ureteric epithelium3 | all | F3 | 14066 | 88381 | 1.22 | 0.55 | 0.1 | 4.4e-196 | 8.42e-192 | |
41 | 23 | Ureteric epithelium3 | all | Wfdc2 | 67701 | 1914951 | 1.15 | 0.98 | 0.3 | 4.04e-194 | 7.72e-190 | |
41 | 23 | Ureteric epithelium3 | all | Tspan6 | 56496 | 1926264 | 1.23 | 0.54 | 0.09 | 1.09e-192 | 2.09e-188 | |
41 | 23 | Ureteric epithelium3 | all | Hspa1b | 15511 | 99517 | 1.08 | 0.59 | 0.11 | 2.42e-189 | 4.62e-185 | |
41 | 23 | Ureteric epithelium3 | all | Me1 | 17436 | 97043 | 1.05 | 0.51 | 0.08 | 3.11e-187 | 5.94e-183 | |
41 | 23 | Ureteric epithelium3 | all | Hsph1 | 15505 | 105053 | 1.4 | 0.77 | 0.24 | 5.58e-158 | 1.07e-153 | |
41 | 23 | Ureteric epithelium3 | all | Spint2 | 20733 | 1338031 | 1.15 | 0.98 | 0.39 | 2.18e-155 | 4.17e-151 | |
41 | 23 | Ureteric epithelium3 | all | Nupr1 | 56312 | 1891834 | 2.05 | 0.79 | 0.24 | 5.57e-155 | 1.06e-150 | |
41 | 23 | Ureteric epithelium3 | all | Tspan13 | 66109 | 1913359 | 1.02 | 0.87 | 0.3 | 2.14e-149 | 4.08e-145 | |
41 | 23 | Ureteric epithelium3 | all | Bcam | 57278 | 1929940 | 1.08 | 0.97 | 0.47 | 4.62e-146 | 8.83e-142 | |
41 | 23 | Ureteric epithelium3 | all | Cryab | 12955 | 88516 | 1.39 | 0.94 | 0.45 | 2.41e-139 | 4.6e-135 | |
41 | 23 | Ureteric epithelium3 | all | Cd9 | 12527 | 88348 | 1.25 | 0.99 | 0.66 | 6.1e-139 | 1.17e-134 | |
41 | 23 | Ureteric epithelium3 | all | Mrps6 | 121022 | 2153111 | 1.04 | 0.87 | 0.33 | 3.65e-135 | 6.97e-131 | |
41 | 23 | Ureteric epithelium3 | all | Akr1b3 | 11677 | 1353494 | 1.54 | 0.91 | 0.44 | 1.53e-128 | 2.94e-124 | |
41 | 23 | Ureteric epithelium3 | all | Hnrnpr | 74326 | 1891692 | 1.14 | 0.92 | 0.51 | 5.74e-113 | 1.1e-108 | |
41 | 23 | Ureteric epithelium3 | all | Atp2a2 | 11938 | 88110 | 1.15 | 0.67 | 0.26 | 1.25e-83 | 2.39e-79 |