Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 21 | Immune5 | all | Lyz2 | 17105 | 96897 | 2.86 | 0.99 | 0.29 | 0 | 0 | |
41 | 21 | Immune5 | all | Plac8 | 231507 | 2445289 | 2.67 | 0.92 | 0.22 | 0 | 0 | |
41 | 21 | Immune5 | all | Lst1 | 16988 | 1096324 | 2.33 | 0.98 | 0.11 | 0 | 0 | |
41 | 21 | Immune5 | all | Tyrobp | 22177 | 1277211 | 2.26 | 1 | 0.22 | 0 | 0 | |
41 | 21 | Immune5 | all | Ms4a6c | 73656 | 2385644 | 2.16 | 0.87 | 0.07 | 0 | 0 | |
41 | 21 | Immune5 | all | Ccl6 | 20305 | 98263 | 2.11 | 0.87 | 0.09 | 0 | 0 | |
41 | 21 | Immune5 | all | Ear2 | 13587 | 108020 | 2.1 | 0.59 | 0 | 0 | 0 | |
41 | 21 | Immune5 | all | Pglyrp1 | 21946 | 1345092 | 2.08 | 0.58 | 0.03 | 0 | 0 | |
41 | 21 | Immune5 | all | Fcer1g | 14127 | 95496 | 2.01 | 1 | 0.24 | 0 | 0 | |
41 | 21 | Immune5 | all | Msrb1 | 27361 | 1351642 | 2.01 | 0.94 | 0.29 | 0 | 0 | |
41 | 21 | Immune5 | all | S100a4 | 20198 | 1330282 | 1.94 | 0.79 | 0.11 | 0 | 0 | |
41 | 21 | Immune5 | all | Coro1a | 12721 | 1345961 | 1.93 | 0.99 | 0.22 | 0 | 0 | |
41 | 21 | Immune5 | all | Alox5ap | 11690 | 107505 | 1.87 | 0.89 | 0.13 | 0 | 0 | |
41 | 21 | Immune5 | all | Lsp1 | 16985 | 96832 | 1.86 | 0.97 | 0.16 | 0 | 0 | |
41 | 21 | Immune5 | all | Ifitm6 | 213002 | 2686976 | 1.86 | 0.8 | 0.01 | 0 | 0 | |
41 | 21 | Immune5 | all | Chil3 | 12655 | 1330860 | 1.78 | 0.29 | 0 | 0 | 0 | |
41 | 21 | Immune5 | all | Cybb | 13058 | 88574 | 1.74 | 0.92 | 0.13 | 0 | 0 | |
41 | 21 | Immune5 | all | Sirpb1c | 100038947 | 3807521 | 1.72 | 0.75 | 0.01 | 0 | 0 | |
41 | 21 | Immune5 | all | Clec4a3 | 73149 | 1920399 | 1.7 | 0.85 | 0.07 | 0 | 0 | |
41 | 21 | Immune5 | all | Spi1 | 20375 | 98282 | 1.69 | 0.94 | 0.13 | 0 | 0 | |
41 | 21 | Immune5 | all | Itgal | 16408 | 96606 | 1.66 | 0.69 | 0.03 | 0 | 0 | |
41 | 21 | Immune5 | all | Hp | 15439 | 96211 | 1.65 | 0.54 | 0 | 0 | 0 | |
41 | 21 | Immune5 | all | Cd300a | 217303 | 2443411 | 1.63 | 0.84 | 0.05 | 0 | 0 | |
41 | 21 | Immune5 | all | Ccl9 | 20308 | 104533 | 1.54 | 0.59 | 0.05 | 0 | 0 | |
41 | 21 | Immune5 | all | Ms4a4c | 64380 | 1927656 | 1.54 | 0.56 | 0.04 | 0 | 0 | |
41 | 21 | Immune5 | all | Samsn1 | 67742 | 1914992 | 1.5 | 0.73 | 0.04 | 0 | 0 | |
41 | 21 | Immune5 | all | Ptprc | 19264 | 97810 | 1.49 | 0.94 | 0.18 | 0 | 0 | |
41 | 21 | Immune5 | all | Itgb2 | 16414 | 96611 | 1.47 | 0.84 | 0.1 | 0 | 0 | |
41 | 21 | Immune5 | all | Clec4a1 | 269799 | 3036291 | 1.47 | 0.79 | 0.06 | 0 | 0 | |
41 | 21 | Immune5 | all | Pou2f2 | 18987 | 101897 | 1.46 | 0.8 | 0.11 | 0 | 0 | |
41 | 21 | Immune5 | all | Tppp3 | 67971 | 1915221 | 1.43 | 0.47 | 0.02 | 0 | 0 | |
41 | 21 | Immune5 | all | Ace | 11421 | 87874 | 1.41 | 0.55 | 0.02 | 0 | 0 | |
41 | 21 | Immune5 | all | Eno3 | 13808 | 95395 | 1.39 | 0.41 | 0.02 | 0 | 0 | |
41 | 21 | Immune5 | all | Nr4a1 | 15370 | 1352454 | 1.36 | 0.61 | 0.03 | 0 | 0 | |
41 | 21 | Immune5 | all | Adgre4 | 52614 | 1196464 | 1.35 | 0.57 | 0 | 0 | 0 | |
41 | 21 | Immune5 | all | Bin2 | 668218 | 3611448 | 1.33 | 0.75 | 0.07 | 0 | 0 | |
41 | 21 | Immune5 | all | Ccr2 | 12772 | 106185 | 1.44 | 0.51 | 0.06 | 9.21e-304 | 1.76e-299 | |
41 | 21 | Immune5 | all | Ptpn6 | 15170 | 96055 | 1.34 | 0.84 | 0.17 | 3.67e-302 | 7.02e-298 | |
41 | 21 | Immune5 | all | Ctss | 13040 | 107341 | 1.39 | 0.97 | 0.23 | 2.84e-284 | 5.43e-280 | |
41 | 21 | Immune5 | all | Samhd1 | 56045 | 1927468 | 1.39 | 0.85 | 0.22 | 1.52e-257 | 2.91e-253 | |
41 | 21 | Immune5 | all | Emp3 | 13732 | 1098729 | 1.47 | 0.88 | 0.25 | 3.62e-248 | 6.93e-244 | |
41 | 21 | Immune5 | all | Lgals3 | 16854 | 96778 | 1.67 | 0.93 | 0.34 | 2.34e-227 | 4.48e-223 | |
41 | 21 | Immune5 | all | Gngt2 | 14710 | 893584 | 1.77 | 0.93 | 0.34 | 1.14e-214 | 2.18e-210 | |
41 | 21 | Immune5 | all | Ly6c2 | 100041546 | 3712069 | 1.53 | 0.4 | 0.05 | 5.35e-204 | 1.02e-199 | |
41 | 21 | Immune5 | all | Cdk2ap2 | 52004 | 1098779 | 1.44 | 0.87 | 0.34 | 8.67e-193 | 1.66e-188 | |
41 | 21 | Immune5 | all | Ifitm3 | 66141 | 1913391 | 1.37 | 1 | 0.59 | 2.84e-191 | 5.43e-187 | |
41 | 21 | Immune5 | all | Sat1 | 20229 | 98233 | 1.58 | 0.97 | 0.58 | 5.43e-185 | 1.04e-180 | |
41 | 21 | Immune5 | all | Tmsb10 | 19240 | 109146 | 1.47 | 0.99 | 0.64 | 4.97e-168 | 9.5e-164 | |
41 | 21 | Immune5 | all | Ifi27l2a | 76933 | 1924183 | 1.51 | 0.7 | 0.22 | 1.71e-144 | 3.27e-140 | |
41 | 21 | Immune5 | all | Crip1 | 12925 | 88501 | 1.38 | 0.91 | 0.58 | 4.19e-114 | 8.02e-110 |