Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 19 | Immune4 | all | Cd209a | 170786 | 2157942 | 2.5 | 0.62 | 0.01 | 0 | 0 | |
41 | 19 | Immune4 | all | Lsp1 | 16985 | 96832 | 2.04 | 0.91 | 0.16 | 0 | 0 | |
41 | 19 | Immune4 | all | Clec10a | 17312 | 96975 | 1.65 | 0.55 | 0.01 | 0 | 0 | |
41 | 19 | Immune4 | all | Ccr2 | 12772 | 106185 | 1.64 | 0.81 | 0.05 | 0 | 0 | |
41 | 19 | Immune4 | all | Cd52 | 23833 | 1346088 | 1.53 | 0.99 | 0.27 | 0 | 0 | |
41 | 19 | Immune4 | all | Alox5ap | 11690 | 107505 | 1.52 | 0.84 | 0.12 | 0 | 0 | |
41 | 19 | Immune4 | all | H2-DMa | 14998 | 95921 | 1.43 | 0.85 | 0.21 | 0 | 0 | |
41 | 19 | Immune4 | all | Ccl9 | 20308 | 104533 | 1.38 | 0.45 | 0.05 | 0 | 0 | |
41 | 19 | Immune4 | all | H2-Oa | 15001 | 95924 | 1.36 | 0.71 | 0.04 | 0 | 0 | |
41 | 19 | Immune4 | all | Itgb7 | 16421 | 96616 | 1.35 | 0.82 | 0.06 | 0 | 0 | |
41 | 19 | Immune4 | all | Rnase6 | 78416 | 1925666 | 1.35 | 0.75 | 0.07 | 0 | 0 | |
41 | 19 | Immune4 | all | S100a4 | 20198 | 1330282 | 1.34 | 0.66 | 0.11 | 0 | 0 | |
41 | 19 | Immune4 | all | Coro1a | 12721 | 1345961 | 1.33 | 0.98 | 0.22 | 0 | 0 | |
41 | 19 | Immune4 | all | Plbd1 | 66857 | 1914107 | 1.33 | 0.73 | 0.11 | 0 | 0 | |
41 | 19 | Immune4 | all | Ms4a6c | 73656 | 2385644 | 1.3 | 0.65 | 0.07 | 0 | 0 | |
41 | 19 | Immune4 | all | Selplg | 20345 | 106689 | 1.3 | 0.91 | 0.13 | 0 | 0 | |
41 | 19 | Immune4 | all | Pid1 | 98496 | 2138391 | 1.26 | 0.72 | 0.12 | 0 | 0 | |
41 | 19 | Immune4 | all | Klrd1 | 16643 | 1196275 | 1.26 | 0.59 | 0.02 | 0 | 0 | |
41 | 19 | Immune4 | all | Clec4b1 | 69810 | 1917060 | 1.16 | 0.55 | 0.07 | 0 | 0 | |
41 | 19 | Immune4 | all | H2-DMb2 | 15000 | 95923 | 1.13 | 0.55 | 0.04 | 0 | 0 | |
41 | 19 | Immune4 | all | Laptm5 | 16792 | 108046 | 1.13 | 0.96 | 0.21 | 0 | 0 | |
41 | 19 | Immune4 | all | Ltb4r1 | 16995 | 1309472 | 1.06 | 0.55 | 0.01 | 0 | 0 | |
41 | 19 | Immune4 | all | Slamf7 | 75345 | 1922595 | 1.05 | 0.66 | 0.06 | 0 | 0 | |
41 | 19 | Immune4 | all | Pld4 | 104759 | 2144765 | 1.02 | 0.76 | 0.13 | 0 | 0 | |
41 | 19 | Immune4 | all | Clec12a | 232413 | 3040968 | 1.01 | 0.65 | 0.06 | 0 | 0 | |
41 | 19 | Immune4 | all | Rac2 | 19354 | 97846 | 1 | 0.91 | 0.17 | 0 | 0 | |
41 | 19 | Immune4 | all | Rps11 | 27207 | 1351329 | 1.22 | 1 | 0.97 | 7e-302 | 1.34e-297 | |
41 | 19 | Immune4 | all | Gm2a | 14667 | 95762 | 1.37 | 0.87 | 0.3 | 5.32e-290 | 1.02e-285 | |
41 | 19 | Immune4 | all | Tyrobp | 22177 | 1277211 | 1.32 | 0.87 | 0.22 | 1.11e-287 | 2.11e-283 | |
41 | 19 | Immune4 | all | Wfdc17 | 100034251 | 3649773 | 1.2 | 0.64 | 0.12 | 5.37e-279 | 1.03e-274 | |
41 | 19 | Immune4 | all | Rps9 | 76846 | 1924096 | 1.05 | 1 | 0.97 | 3.61e-278 | 6.91e-274 | |
41 | 19 | Immune4 | all | Ifi30 | 65972 | 2137648 | 1.26 | 0.72 | 0.19 | 4.1e-266 | 7.84e-262 | |
41 | 19 | Immune4 | all | Vim | 22352 | 98932 | 1.16 | 0.83 | 0.22 | 1.92e-264 | 3.66e-260 | |
41 | 19 | Immune4 | all | Ccl6 | 20305 | 98263 | 1.39 | 0.54 | 0.1 | 7.23e-245 | 1.38e-240 | |
41 | 19 | Immune4 | all | H2-DMb1 | 14999 | 95922 | 1.26 | 0.82 | 0.26 | 8.64e-241 | 1.65e-236 | |
41 | 19 | Immune4 | all | Tmsb4x | 19241 | 99510 | 1.2 | 1 | 0.93 | 3.18e-240 | 6.09e-236 | |
41 | 19 | Immune4 | all | Tmsb10 | 19240 | 109146 | 1.3 | 1 | 0.64 | 4.07e-236 | 7.79e-232 | |
41 | 19 | Immune4 | all | Syngr2 | 20973 | 1328324 | 1.11 | 0.8 | 0.28 | 9.15e-221 | 1.75e-216 | |
41 | 19 | Immune4 | all | Naaa | 67111 | 1914361 | 1.09 | 0.47 | 0.09 | 6.83e-215 | 1.31e-210 | |
41 | 19 | Immune4 | all | Crip1 | 12925 | 88501 | 1.28 | 0.97 | 0.58 | 4.31e-205 | 8.25e-201 | |
41 | 19 | Immune4 | all | Fxyd5 | 18301 | 1201785 | 1.11 | 0.95 | 0.4 | 9.61e-202 | 1.84e-197 | |
41 | 19 | Immune4 | all | Actb | 11461 | 87904 | 1.02 | 1 | 0.94 | 1.18e-188 | 2.25e-184 | |
41 | 19 | Immune4 | all | H2-Eb1 | 14969 | 95901 | 1.48 | 0.89 | 0.43 | 3.22e-183 | 6.16e-179 | |
41 | 19 | Immune4 | all | H2-Aa | 14960 | 95895 | 1.54 | 0.88 | 0.46 | 1.97e-176 | 3.77e-172 | |
41 | 19 | Immune4 | all | Cd74 | 16149 | 96534 | 1.4 | 0.93 | 0.64 | 4.49e-155 | 8.58e-151 | |
41 | 19 | Immune4 | all | H2-Ab1 | 14961 | 103070 | 1.51 | 0.91 | 0.64 | 2.79e-152 | 5.34e-148 | |
41 | 19 | Immune4 | all | Mgl2 | 216864 | 2385729 | 1.3 | 0.46 | 0.12 | 9.71e-136 | 1.86e-131 | |
41 | 19 | Immune4 | all | Lgals1 | 16852 | 96777 | 0.98 | 0.7 | 0.28 | 1.15e-116 | 2.2e-112 | |
41 | 19 | Immune4 | all | Cst3 | 13010 | 102519 | 1.24 | 0.96 | 0.93 | 2.28e-116 | 4.37e-112 | |
41 | 19 | Immune4 | all | Irf8 | 15900 | 96395 | 1.19 | 0.29 | 0.17 | 4.81e-18 | 9.2e-14 |