Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 16 | Immune3 | all | Cd79a | 12518 | 101774 | 3.59 | 1 | 0.02 | 0 | 0 | |
41 | 16 | Immune3 | all | Ly6d | 17068 | 96881 | 3.25 | 0.97 | 0.02 | 0 | 0 | |
41 | 16 | Immune3 | all | Cd79b | 15985 | 96431 | 3.23 | 1 | 0.08 | 0 | 0 | |
41 | 16 | Immune3 | all | Ms4a1 | 12482 | 88321 | 2.81 | 0.97 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | H2-DMb2 | 15000 | 95923 | 2.44 | 0.94 | 0.03 | 0 | 0 | |
41 | 16 | Immune3 | all | Fcmr | 69169 | 1916419 | 2.38 | 0.87 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | Ltb | 16994 | 104796 | 2.2 | 0.91 | 0.07 | 0 | 0 | |
41 | 16 | Immune3 | all | Cd37 | 12493 | 88330 | 2.19 | 0.93 | 0.08 | 0 | 0 | |
41 | 16 | Immune3 | all | Gm31243 | 102633410 | 5590402 | 2.02 | 0.78 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | Ptprcap | 19265 | 97811 | 2.01 | 0.93 | 0.06 | 0 | 0 | |
41 | 16 | Immune3 | all | Siglecg | 243958 | 2443630 | 1.96 | 0.81 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | Ebf1 | 13591 | 95275 | 1.89 | 0.97 | 0.23 | 0 | 0 | |
41 | 16 | Immune3 | all | Bank1 | 242248 | 2442120 | 1.83 | 0.78 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | H2-Ob | 15002 | 95925 | 1.83 | 0.77 | 0.04 | 0 | 0 | |
41 | 16 | Immune3 | all | Coro1a | 12721 | 1345961 | 1.76 | 0.99 | 0.21 | 0 | 0 | |
41 | 16 | Immune3 | all | Mzb1 | 69816 | 1917066 | 1.73 | 0.68 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | Vpreb3 | 22364 | 98938 | 1.71 | 0.54 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | Fcrla | 98752 | 2138647 | 1.68 | 0.7 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | Cd55 | 13136 | 104850 | 1.66 | 0.69 | 0.04 | 0 | 0 | |
41 | 16 | Immune3 | all | Serpinb1a | 66222 | 1913472 | 1.6 | 0.66 | 0.04 | 0 | 0 | |
41 | 16 | Immune3 | all | Cd52 | 23833 | 1346088 | 1.55 | 1 | 0.26 | 0 | 0 | |
41 | 16 | Immune3 | all | Hvcn1 | 74096 | 1921346 | 1.54 | 0.62 | 0.04 | 0 | 0 | |
41 | 16 | Immune3 | all | Fcer2a | 14128 | 95497 | 1.53 | 0.57 | 0 | 0 | 0 | |
41 | 16 | Immune3 | all | Rac2 | 19354 | 97846 | 1.52 | 0.92 | 0.17 | 0 | 0 | |
41 | 16 | Immune3 | all | Tnfrsf13c | 72049 | 1919299 | 1.45 | 0.56 | 0 | 0 | 0 | |
41 | 16 | Immune3 | all | Shisa5 | 66940 | 1915044 | 1.44 | 0.97 | 0.59 | 0 | 0 | |
41 | 16 | Immune3 | all | Sell | 20343 | 98279 | 1.43 | 0.57 | 0.02 | 0 | 0 | |
41 | 16 | Immune3 | all | H2-Oa | 15001 | 95924 | 1.42 | 0.63 | 0.03 | 0 | 0 | |
41 | 16 | Immune3 | all | Cd19 | 12478 | 88319 | 1.42 | 0.59 | 0 | 0 | 0 | |
41 | 16 | Immune3 | all | Rhoh | 74734 | 1921984 | 1.42 | 0.68 | 0.06 | 0 | 0 | |
41 | 16 | Immune3 | all | Limd2 | 67803 | 1915053 | 1.41 | 0.73 | 0.11 | 0 | 0 | |
41 | 16 | Immune3 | all | Foxp1 | 108655 | 1914004 | 1.41 | 0.81 | 0.23 | 0 | 0 | |
41 | 16 | Immune3 | all | Gm30211 | 102632036 | 5589370 | 1.41 | 0.43 | 0 | 0 | 0 | |
41 | 16 | Immune3 | all | Cd2 | 12481 | 88320 | 1.4 | 0.6 | 0.04 | 0 | 0 | |
41 | 16 | Immune3 | all | Apobec3 | 80287 | 1933111 | 1.39 | 0.87 | 0.31 | 0 | 0 | |
41 | 16 | Immune3 | all | Arhgdib | 11857 | 101940 | 1.38 | 0.96 | 0.35 | 0 | 0 | |
41 | 16 | Immune3 | all | Ralgps2 | 78255 | 1925505 | 1.37 | 0.61 | 0.06 | 0 | 0 | |
41 | 16 | Immune3 | all | Cd53 | 12508 | 88341 | 1.37 | 0.85 | 0.18 | 0 | 0 | |
41 | 16 | Immune3 | all | Serp1 | 28146 | 92638 | 1.36 | 0.89 | 0.39 | 0 | 0 | |
41 | 16 | Immune3 | all | Rps27 | 57294 | 1888676 | 1.33 | 1 | 0.99 | 0 | 0 | |
41 | 16 | Immune3 | all | Ptpn6 | 15170 | 96055 | 1.33 | 0.7 | 0.17 | 0 | 0 | |
41 | 16 | Immune3 | all | Arhgap45 | 70719 | 1917969 | 1.32 | 0.79 | 0.16 | 0 | 0 | |
41 | 16 | Immune3 | all | Lsp1 | 16985 | 96832 | 1.32 | 0.85 | 0.16 | 0 | 0 | |
41 | 16 | Immune3 | all | Gm8369 | 666926 | 3645380 | 1.32 | 0.55 | 0.02 | 0 | 0 | |
41 | 16 | Immune3 | all | Tmsb10 | 19240 | 109146 | 1.31 | 1 | 0.63 | 0 | 0 | |
41 | 16 | Immune3 | all | Ms4a4c | 64380 | 1927656 | 1.31 | 0.53 | 0.03 | 0 | 0 | |
41 | 16 | Immune3 | all | Cnp | 12799 | 88437 | 1.24 | 0.65 | 0.12 | 0 | 0 | |
41 | 16 | Immune3 | all | Spib | 272382 | 892986 | 1.24 | 0.44 | 0 | 0 | 0 | |
41 | 16 | Immune3 | all | Bcl11a | 14025 | 106190 | 1.24 | 0.49 | 0.01 | 0 | 0 | |
41 | 16 | Immune3 | all | Ccr7 | 12775 | 103011 | 1.22 | 0.49 | 0.01 | 0 | 0 |