Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 14 | Immune2 | all | Ccl5 | 20304 | 98262 | 3.44 | 0.71 | 0.04 | 0 | 0 | |
41 | 14 | Immune2 | all | Nkg7 | 72310 | 1931250 | 2.79 | 0.91 | 0.02 | 0 | 0 | |
41 | 14 | Immune2 | all | Ms4a4b | 60361 | 1913083 | 2.76 | 0.96 | 0.03 | 0 | 0 | |
41 | 14 | Immune2 | all | Cd3g | 12502 | 88333 | 2.74 | 0.97 | 0.02 | 0 | 0 | |
41 | 14 | Immune2 | all | Cxcr6 | 80901 | 1934582 | 2.63 | 0.87 | 0.01 | 0 | 0 | |
41 | 14 | Immune2 | all | Cd3d | 12500 | 88331 | 2.45 | 0.96 | 0.02 | 0 | 0 | |
41 | 14 | Immune2 | all | Rac2 | 19354 | 97846 | 2.29 | 0.99 | 0.16 | 0 | 0 | |
41 | 14 | Immune2 | all | Thy1 | 21838 | 98747 | 2.28 | 0.9 | 0.02 | 0 | 0 | |
41 | 14 | Immune2 | all | AW112010 | 107350 | 2147706 | 2.26 | 0.98 | 0.24 | 0 | 0 | |
41 | 14 | Immune2 | all | Ly6c2 | 100041546 | 3712069 | 2.22 | 0.52 | 0.04 | 0 | 0 | |
41 | 14 | Immune2 | all | Hcst | 23900 | 1344360 | 2.21 | 0.89 | 0.06 | 0 | 0 | |
41 | 14 | Immune2 | all | Ltb | 16994 | 104796 | 2.16 | 0.89 | 0.06 | 0 | 0 | |
41 | 14 | Immune2 | all | Lck | 16818 | 96756 | 2.13 | 0.9 | 0.03 | 0 | 0 | |
41 | 14 | Immune2 | all | Ptprcap | 19265 | 97811 | 2.12 | 0.94 | 0.05 | 0 | 0 | |
41 | 14 | Immune2 | all | Gimap3 | 83408 | 1932723 | 2.1 | 0.9 | 0.04 | 0 | 0 | |
41 | 14 | Immune2 | all | Cd52 | 23833 | 1346088 | 2.09 | 1 | 0.26 | 0 | 0 | |
41 | 14 | Immune2 | all | Tmsb10 | 19240 | 109146 | 2.06 | 1 | 0.63 | 0 | 0 | |
41 | 14 | Immune2 | all | Cxcr3 | 12766 | 1277207 | 2.04 | 0.82 | 0.02 | 0 | 0 | |
41 | 14 | Immune2 | all | Lat | 16797 | 1342293 | 1.97 | 0.85 | 0.02 | 0 | 0 | |
41 | 14 | Immune2 | all | Sept1 | 54204 | 1858916 | 1.9 | 0.92 | 0.13 | 0 | 0 | |
41 | 14 | Immune2 | all | Id2 | 15902 | 96397 | 1.88 | 0.96 | 0.46 | 0 | 0 | |
41 | 14 | Immune2 | all | Cd3e | 12501 | 88332 | 1.87 | 0.8 | 0.01 | 0 | 0 | |
41 | 14 | Immune2 | all | Ctsw | 13041 | 1338045 | 1.84 | 0.76 | 0.01 | 0 | 0 | |
41 | 14 | Immune2 | all | Coro1a | 12721 | 1345961 | 1.83 | 0.98 | 0.21 | 0 | 0 | |
41 | 14 | Immune2 | all | Gimap7 | 231932 | 1349657 | 1.82 | 0.74 | 0.02 | 0 | 0 | |
41 | 14 | Immune2 | all | Ms4a6b | 69774 | 1917024 | 1.76 | 0.85 | 0.09 | 0 | 0 | |
41 | 14 | Immune2 | all | H2-Q7 | 15018 | 95936 | 1.73 | 0.94 | 0.21 | 0 | 0 | |
41 | 14 | Immune2 | all | Cd2 | 12481 | 88320 | 1.72 | 0.78 | 0.03 | 0 | 0 | |
41 | 14 | Immune2 | all | Xcl1 | 16963 | 104593 | 1.7 | 0.53 | 0.01 | 0 | 0 | |
41 | 14 | Immune2 | all | Lgals1 | 16852 | 96777 | 1.6 | 0.83 | 0.28 | 0 | 0 | |
41 | 14 | Immune2 | all | Skap1 | 78473 | 1925723 | 1.59 | 0.72 | 0.02 | 0 | 0 | |
41 | 14 | Immune2 | all | Ptpn18 | 19253 | 108410 | 1.56 | 0.92 | 0.29 | 0 | 0 | |
41 | 14 | Immune2 | all | Selplg | 20345 | 106689 | 1.56 | 0.84 | 0.13 | 0 | 0 | |
41 | 14 | Immune2 | all | S100a4 | 20198 | 1330282 | 1.52 | 0.6 | 0.11 | 0 | 0 | |
41 | 14 | Immune2 | all | Ptprc | 19264 | 97810 | 1.51 | 0.9 | 0.17 | 0 | 0 | |
41 | 14 | Immune2 | all | Arhgdib | 11857 | 101940 | 1.48 | 0.96 | 0.35 | 0 | 0 | |
41 | 14 | Immune2 | all | Fgl2 | 14190 | 103266 | 1.47 | 0.56 | 0.08 | 0 | 0 | |
41 | 14 | Immune2 | all | Ccnd2 | 12444 | 88314 | 1.47 | 0.88 | 0.28 | 0 | 0 | |
41 | 14 | Immune2 | all | Gimap4 | 107526 | 1349656 | 1.46 | 0.95 | 0.31 | 0 | 0 | |
41 | 14 | Immune2 | all | Epsti1 | 108670 | 1915168 | 1.43 | 0.66 | 0.08 | 0 | 0 | |
41 | 14 | Immune2 | all | Itgb7 | 16421 | 96616 | 1.42 | 0.69 | 0.06 | 0 | 0 | |
41 | 14 | Immune2 | all | Cd28 | 12487 | 88327 | 1.41 | 0.58 | 0.01 | 0 | 0 | |
41 | 14 | Immune2 | all | Klrk1 | 27007 | 1196250 | 1.38 | 0.36 | 0.01 | 0 | 0 | |
41 | 14 | Immune2 | all | Itgb2 | 16414 | 96611 | 1.35 | 0.71 | 0.1 | 0 | 0 | |
41 | 14 | Immune2 | all | Cotl1 | 72042 | 1919292 | 1.34 | 0.82 | 0.26 | 0 | 0 | |
41 | 14 | Immune2 | all | B4galnt1 | 14421 | 1342057 | 1.33 | 0.67 | 0.1 | 0 | 0 | |
41 | 14 | Immune2 | all | Lsp1 | 16985 | 96832 | 1.32 | 0.83 | 0.16 | 0 | 0 | |
41 | 14 | Immune2 | all | Pfn1 | 18643 | 97549 | 1.31 | 1 | 0.91 | 0 | 0 | |
41 | 14 | Immune2 | all | Arhgap45 | 70719 | 1917969 | 1.3 | 0.8 | 0.15 | 0 | 0 | |
41 | 14 | Immune2 | all | Shisa5 | 66940 | 1915044 | 1.29 | 0.97 | 0.59 | 0 | 0 |