Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 12 | Nephron2 | all | Klk1 | 16612 | 102850 | 3.58 | 0.95 | 0.28 | 0 | 0 | |
41 | 12 | Nephron2 | all | S100g | 12309 | 104528 | 3.5 | 0.76 | 0.23 | 0 | 0 | |
41 | 12 | Nephron2 | all | Slc12a3 | 20497 | 108114 | 3.48 | 0.87 | 0.03 | 0 | 0 | |
41 | 12 | Nephron2 | all | Calb1 | 12307 | 88248 | 3.06 | 0.75 | 0.05 | 0 | 0 | |
41 | 12 | Nephron2 | all | Tmem52b | 330428 | 2442838 | 2.59 | 0.99 | 0.06 | 0 | 0 | |
41 | 12 | Nephron2 | all | Pgam2 | 56012 | 1933118 | 2.5 | 0.97 | 0.05 | 0 | 0 | |
41 | 12 | Nephron2 | all | Clu | 12759 | 88423 | 2.49 | 0.9 | 0.1 | 0 | 0 | |
41 | 12 | Nephron2 | all | Wnk1 | 232341 | 2442092 | 2.42 | 0.99 | 0.39 | 0 | 0 | |
41 | 12 | Nephron2 | all | Defb1 | 13214 | 1096878 | 2.38 | 0.99 | 0.23 | 0 | 0 | |
41 | 12 | Nephron2 | all | Pvalb | 19293 | 97821 | 2.28 | 0.55 | 0.01 | 0 | 0 | |
41 | 12 | Nephron2 | all | Mt1 | 17748 | 97171 | 2.09 | 0.98 | 0.3 | 0 | 0 | |
41 | 12 | Nephron2 | all | Ppp1r1a | 58200 | 1889595 | 2.03 | 0.92 | 0.1 | 0 | 0 | |
41 | 12 | Nephron2 | all | Atp1a1 | 11928 | 88105 | 1.92 | 1 | 0.59 | 0 | 0 | |
41 | 12 | Nephron2 | all | Kl | 16591 | 1101771 | 1.87 | 0.82 | 0.15 | 0 | 0 | |
41 | 12 | Nephron2 | all | Kng2 | 385643 | 3027157 | 1.86 | 0.99 | 0.12 | 0 | 0 | |
41 | 12 | Nephron2 | all | Fxyd2 | 11936 | 1195260 | 1.72 | 1 | 0.63 | 0 | 0 | |
41 | 12 | Nephron2 | all | Tmem213 | 77522 | 1924772 | 1.68 | 0.99 | 0.2 | 0 | 0 | |
41 | 12 | Nephron2 | all | Mt2 | 17750 | 97172 | 1.67 | 0.77 | 0.08 | 0 | 0 | |
41 | 12 | Nephron2 | all | Ldhb | 16832 | 96763 | 1.52 | 1 | 0.5 | 0 | 0 | |
41 | 12 | Nephron2 | all | Fabp3 | 14077 | 95476 | 1.52 | 0.82 | 0.13 | 0 | 0 | |
41 | 12 | Nephron2 | all | Oxct1 | 67041 | 1914291 | 1.48 | 0.95 | 0.4 | 0 | 0 | |
41 | 12 | Nephron2 | all | Sfrp1 | 20377 | 892014 | 1.45 | 0.63 | 0.02 | 0 | 0 | |
41 | 12 | Nephron2 | all | Sgms2 | 74442 | 1921692 | 1.44 | 0.77 | 0.08 | 0 | 0 | |
41 | 12 | Nephron2 | all | Ier3 | 15937 | 104814 | 1.41 | 0.72 | 0.12 | 0 | 0 | |
41 | 12 | Nephron2 | all | Wnk4 | 69847 | 1917097 | 1.41 | 0.85 | 0.12 | 0 | 0 | |
41 | 12 | Nephron2 | all | Wfdc15b | 192201 | 2445041 | 1.4 | 0.81 | 0.28 | 0 | 0 | |
41 | 12 | Nephron2 | all | Gabarapl1 | 57436 | 1914980 | 1.38 | 0.97 | 0.55 | 0 | 0 | |
41 | 12 | Nephron2 | all | Emx1 | 13796 | 95387 | 1.37 | 0.73 | 0.02 | 0 | 0 | |
41 | 12 | Nephron2 | all | Kcnj1 | 56379 | 1927248 | 1.35 | 0.91 | 0.11 | 0 | 0 | |
41 | 12 | Nephron2 | all | Egf | 13645 | 95290 | 1.34 | 0.79 | 0.14 | 0 | 0 | |
41 | 12 | Nephron2 | all | Atp5g1 | 11951 | 107653 | 1.32 | 1 | 0.72 | 0 | 0 | |
41 | 12 | Nephron2 | all | Cox7b | 66142 | 1913392 | 1.31 | 0.99 | 0.66 | 0 | 0 | |
41 | 12 | Nephron2 | all | Clcnkb | 56365 | 1930643 | 1.31 | 0.85 | 0.09 | 0 | 0 | |
41 | 12 | Nephron2 | all | S100a1 | 20193 | 1338917 | 1.29 | 0.99 | 0.6 | 0 | 0 | |
41 | 12 | Nephron2 | all | Hoxb5os | 75395 | 1922645 | 1.27 | 0.78 | 0.11 | 0 | 0 | |
41 | 12 | Nephron2 | all | Uqcrq | 22272 | 107807 | 1.27 | 0.99 | 0.73 | 0 | 0 | |
41 | 12 | Nephron2 | all | Cwh43 | 231293 | 2444131 | 1.25 | 0.64 | 0.02 | 0 | 0 | |
41 | 12 | Nephron2 | all | Hoxd8 | 15437 | 96209 | 1.23 | 0.83 | 0.16 | 0 | 0 | |
41 | 12 | Nephron2 | all | Cox6c | 12864 | 104614 | 1.23 | 1 | 0.89 | 0 | 0 | |
41 | 12 | Nephron2 | all | Abca13 | 268379 | 2388707 | 1.23 | 0.66 | 0.03 | 0 | 0 | |
41 | 12 | Nephron2 | all | Atp5k | 11958 | 106636 | 1.19 | 0.99 | 0.73 | 0 | 0 | |
41 | 12 | Nephron2 | all | Lhx1 | 16869 | 99783 | 1.18 | 0.61 | 0.05 | 0 | 0 | |
41 | 12 | Nephron2 | all | Nudt4 | 71207 | 1918457 | 1.18 | 0.89 | 0.25 | 0 | 0 | |
41 | 12 | Nephron2 | all | Atp1b1 | 11931 | 88108 | 1.18 | 1 | 0.5 | 0 | 0 | |
41 | 12 | Nephron2 | all | Cox5b | 12859 | 88475 | 1.17 | 1 | 0.82 | 0 | 0 | |
41 | 12 | Nephron2 | all | Ndufa1 | 54405 | 1929511 | 1.17 | 0.98 | 0.69 | 0 | 0 | |
41 | 12 | Nephron2 | all | Atp5e | 67126 | 1855697 | 1.17 | 0.99 | 0.84 | 0 | 0 | |
41 | 12 | Nephron2 | all | Slc25a5 | 11740 | 1353496 | 1.15 | 1 | 0.8 | 0 | 0 | |
41 | 12 | Nephron2 | all | Atp5mpl | 70257 | 1917507 | 1.13 | 0.99 | 0.72 | 0 | 0 | |
41 | 12 | Nephron2 | all | COX1 | 17708 | 102504 | 1.2 | 1 | 1 | 2.47e-194 | 4.72e-190 |