Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 11 | Vascular2 | all | Fbln5 | 23876 | 1346091 | 1.69 | 0.52 | 0.04 | 0 | 0 | |
41 | 11 | Vascular2 | all | Tm4sf1 | 17112 | 104678 | 1.66 | 1 | 0.42 | 0 | 0 | |
41 | 11 | Vascular2 | all | Thbd | 21824 | 98736 | 1.64 | 0.83 | 0.16 | 0 | 0 | |
41 | 11 | Vascular2 | all | Pi16 | 74116 | 1921366 | 1.61 | 0.58 | 0.04 | 0 | 0 | |
41 | 11 | Vascular2 | all | Crip1 | 12925 | 88501 | 1.52 | 0.98 | 0.57 | 0 | 0 | |
41 | 11 | Vascular2 | all | Slc6a6 | 21366 | 98488 | 1.34 | 0.87 | 0.46 | 0 | 0 | |
41 | 11 | Vascular2 | all | Podxl | 27205 | 1351317 | 1.32 | 0.79 | 0.19 | 0 | 0 | |
41 | 11 | Vascular2 | all | Fbln2 | 14115 | 95488 | 1.26 | 0.42 | 0.01 | 0 | 0 | |
41 | 11 | Vascular2 | all | Crip2 | 68337 | 1915587 | 1.23 | 0.99 | 0.57 | 0 | 0 | |
41 | 11 | Vascular2 | all | Slc9a3r2 | 65962 | 1890662 | 1.23 | 0.93 | 0.31 | 0 | 0 | |
41 | 11 | Vascular2 | all | Id1 | 15901 | 96396 | 1.23 | 0.86 | 0.3 | 0 | 0 | |
41 | 11 | Vascular2 | all | Ltbp4 | 108075 | 1321395 | 1.2 | 0.51 | 0.09 | 0 | 0 | |
41 | 11 | Vascular2 | all | Timp3 | 21859 | 98754 | 1.17 | 0.98 | 0.68 | 0 | 0 | |
41 | 11 | Vascular2 | all | Eln | 13717 | 95317 | 1.16 | 0.34 | 0.03 | 0 | 0 | |
41 | 11 | Vascular2 | all | Klf4 | 16600 | 1342287 | 1.16 | 0.49 | 0.07 | 0 | 0 | |
41 | 11 | Vascular2 | all | Gja4 | 14612 | 95715 | 1.15 | 0.47 | 0.07 | 0 | 0 | |
41 | 11 | Vascular2 | all | Ebf1 | 13591 | 95275 | 1.14 | 0.8 | 0.23 | 0 | 0 | |
41 | 11 | Vascular2 | all | Epas1 | 13819 | 109169 | 1.14 | 0.77 | 0.25 | 0 | 0 | |
41 | 11 | Vascular2 | all | Cd200 | 17470 | 1196990 | 1.12 | 0.89 | 0.35 | 0 | 0 | |
41 | 11 | Vascular2 | all | Sema3g | 218877 | 3041242 | 1.08 | 0.46 | 0.06 | 0 | 0 | |
41 | 11 | Vascular2 | all | Icam2 | 15896 | 96394 | 1.06 | 0.84 | 0.29 | 0 | 0 | |
41 | 11 | Vascular2 | all | Meis2 | 17536 | 108564 | 1.06 | 0.91 | 0.33 | 0 | 0 | |
41 | 11 | Vascular2 | all | Ptprr | 19279 | 109559 | 1.04 | 0.45 | 0.05 | 0 | 0 | |
41 | 11 | Vascular2 | all | Ssu2 | 243612 | 2443733 | 0.94 | 0.32 | 0 | 0 | 0 | |
41 | 11 | Vascular2 | all | S100a16 | 67860 | 1915110 | 1.05 | 0.93 | 0.51 | 4.81e-303 | 9.19e-299 | |
41 | 11 | Vascular2 | all | Ramp2 | 54409 | 1859650 | 1.05 | 0.76 | 0.25 | 3.51e-296 | 6.72e-292 | |
41 | 11 | Vascular2 | all | Heg1 | 77446 | 1924696 | 1.06 | 0.56 | 0.14 | 6.11e-292 | 1.17e-287 | |
41 | 11 | Vascular2 | all | Clic5 | 224796 | 1917912 | 0.97 | 0.53 | 0.13 | 3.05e-287 | 5.83e-283 | |
41 | 11 | Vascular2 | all | Ecscr | 68545 | 1915795 | 0.97 | 0.72 | 0.22 | 7.83e-287 | 1.5e-282 | |
41 | 11 | Vascular2 | all | Klf2 | 16598 | 1342772 | 0.9 | 0.44 | 0.09 | 8.79e-284 | 1.68e-279 | |
41 | 11 | Vascular2 | all | S100a6 | 20200 | 1339467 | 0.93 | 0.92 | 0.43 | 6.27e-283 | 1.2e-278 | |
41 | 11 | Vascular2 | all | Plscr2 | 18828 | 1270860 | 1.19 | 0.9 | 0.53 | 1.74e-280 | 3.33e-276 | |
41 | 11 | Vascular2 | all | Plscr1 | 22038 | 893575 | 1.17 | 0.71 | 0.27 | 2.96e-280 | 5.65e-276 | |
41 | 11 | Vascular2 | all | Vim | 22352 | 98932 | 1.59 | 0.65 | 0.21 | 4.15e-277 | 7.94e-273 | |
41 | 11 | Vascular2 | all | Ly6a | 110454 | 107527 | 0.98 | 0.99 | 0.63 | 9.31e-263 | 1.78e-258 | |
41 | 11 | Vascular2 | all | Edn1 | 13614 | 95283 | 1.05 | 0.29 | 0.04 | 8.84e-262 | 1.69e-257 | |
41 | 11 | Vascular2 | all | Ifitm3 | 66141 | 1913391 | 0.93 | 0.99 | 0.58 | 1.1e-260 | 2.1e-256 | |
41 | 11 | Vascular2 | all | Lims2 | 225341 | 2385067 | 0.99 | 0.73 | 0.26 | 4.32e-260 | 8.27e-256 | |
41 | 11 | Vascular2 | all | Acvrl1 | 11482 | 1338946 | 0.99 | 0.65 | 0.21 | 2.97e-257 | 5.69e-253 | |
41 | 11 | Vascular2 | all | S100a13 | 20196 | 109581 | 0.94 | 0.9 | 0.53 | 5.56e-255 | 1.06e-250 | |
41 | 11 | Vascular2 | all | Cd93 | 17064 | 106664 | 0.91 | 0.59 | 0.19 | 9.09e-230 | 1.74e-225 | |
41 | 11 | Vascular2 | all | Kitl | 17311 | 96974 | 0.93 | 0.52 | 0.15 | 1.2e-226 | 2.29e-222 | |
41 | 11 | Vascular2 | all | Tcim | 69068 | 1916318 | 1.11 | 0.67 | 0.25 | 2.54e-224 | 4.87e-220 | |
41 | 11 | Vascular2 | all | S100a4 | 20198 | 1330282 | 0.97 | 0.44 | 0.11 | 4.37e-222 | 8.36e-218 | |
41 | 11 | Vascular2 | all | Adam15 | 11490 | 1333882 | 0.98 | 0.66 | 0.27 | 5.77e-210 | 1.1e-205 | |
41 | 11 | Vascular2 | all | Clic4 | 29876 | 1352754 | 0.91 | 0.67 | 0.31 | 1.47e-173 | 2.81e-169 | |
41 | 11 | Vascular2 | all | Glul | 14645 | 95739 | 1.43 | 0.65 | 0.34 | 1.95e-169 | 3.73e-165 | |
41 | 11 | Vascular2 | all | Rtl8a | 66158 | 1913408 | 0.94 | 0.58 | 0.24 | 5.68e-169 | 1.09e-164 | |
41 | 11 | Vascular2 | all | Tsc22d1 | 21807 | 109127 | 0.9 | 0.82 | 0.53 | 1.75e-168 | 3.34e-164 | |
41 | 11 | Vascular2 | all | Tspan8 | 216350 | 2384918 | 1.85 | 0.43 | 0.23 | 6.26e-79 | 1.2e-74 |