Marker Genes
Dataset: Single-Cell Profiling Reveals Sex, Lineage, and Regional Diversity in the Mouse Kidney
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL6/J
- stage:
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31689386
- subset name: all
- total genes: Not reported
- clustering: Seurat
- pseudotime: None
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE129798
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
41 | 0 | Immune1 | all | C1qb | 12260 | 88224 | 3.88 | 1 | 0.13 | 0 | 0 | |
41 | 0 | Immune1 | all | C1qa | 12259 | 88223 | 3.87 | 1 | 0.12 | 0 | 0 | |
41 | 0 | Immune1 | all | C1qc | 12262 | 88225 | 3.67 | 1 | 0.1 | 0 | 0 | |
41 | 0 | Immune1 | all | Cd74 | 16149 | 96534 | 3.64 | 1 | 0.6 | 0 | 0 | |
41 | 0 | Immune1 | all | H2-Eb1 | 14969 | 95901 | 3.48 | 1 | 0.37 | 0 | 0 | |
41 | 0 | Immune1 | all | H2-Aa | 14960 | 95895 | 3.39 | 1 | 0.4 | 0 | 0 | |
41 | 0 | Immune1 | all | H2-Ab1 | 14961 | 103070 | 3.37 | 1 | 0.6 | 0 | 0 | |
41 | 0 | Immune1 | all | Lyz2 | 17105 | 96897 | 2.95 | 0.98 | 0.22 | 0 | 0 | |
41 | 0 | Immune1 | all | Ctss | 13040 | 107341 | 2.94 | 1 | 0.14 | 0 | 0 | |
41 | 0 | Immune1 | all | Fcer1g | 14127 | 95496 | 2.76 | 1 | 0.16 | 0 | 0 | |
41 | 0 | Immune1 | all | Cd14 | 12475 | 88318 | 2.69 | 0.96 | 0.08 | 0 | 0 | |
41 | 0 | Immune1 | all | Apoe | 11816 | 88057 | 2.59 | 0.92 | 0.66 | 0 | 0 | |
41 | 0 | Immune1 | all | Tyrobp | 22177 | 1277211 | 2.48 | 1 | 0.13 | 0 | 0 | |
41 | 0 | Immune1 | all | Ctsc | 13032 | 109553 | 2.39 | 0.97 | 0.11 | 0 | 0 | |
41 | 0 | Immune1 | all | Mgl2 | 216864 | 2385729 | 2.34 | 0.84 | 0.03 | 0 | 0 | |
41 | 0 | Immune1 | all | Cd72 | 12517 | 88345 | 2.31 | 0.9 | 0.06 | 0 | 0 | |
41 | 0 | Immune1 | all | Csf1r | 12978 | 1339758 | 2.27 | 0.95 | 0.06 | 0 | 0 | |
41 | 0 | Immune1 | all | H2-DMa | 14998 | 95921 | 2.25 | 0.97 | 0.13 | 0 | 0 | |
41 | 0 | Immune1 | all | Wfdc17 | 100034251 | 3649773 | 2.25 | 0.8 | 0.05 | 0 | 0 | |
41 | 0 | Immune1 | all | H2-DMb1 | 14999 | 95922 | 2.23 | 0.96 | 0.18 | 0 | 0 | |
41 | 0 | Immune1 | all | Fcgr3 | 14131 | 95500 | 2.21 | 0.94 | 0.04 | 0 | 0 | |
41 | 0 | Immune1 | all | Trf | 22041 | 98821 | 2.2 | 0.93 | 0.06 | 0 | 0 | |
41 | 0 | Immune1 | all | Cst3 | 13010 | 102519 | 2.19 | 1 | 0.92 | 0 | 0 | |
41 | 0 | Immune1 | all | Laptm5 | 16792 | 108046 | 2.16 | 0.99 | 0.13 | 0 | 0 | |
41 | 0 | Immune1 | all | Lilra5 | 232801 | 3647196 | 2.09 | 0.86 | 0.02 | 0 | 0 | |
41 | 0 | Immune1 | all | Ly86 | 17084 | 1321404 | 2.07 | 0.94 | 0.06 | 0 | 0 | |
41 | 0 | Immune1 | all | Hpgd | 15446 | 108085 | 2.03 | 0.86 | 0.06 | 0 | 0 | |
41 | 0 | Immune1 | all | Adgre1 | 13733 | 106912 | 2 | 0.85 | 0.02 | 0 | 0 | |
41 | 0 | Immune1 | all | Hexb | 15212 | 96074 | 1.98 | 0.96 | 0.3 | 0 | 0 | |
41 | 0 | Immune1 | all | Ms4a7 | 109225 | 1918846 | 1.95 | 0.7 | 0.02 | 0 | 0 | |
41 | 0 | Immune1 | all | Slamf9 | 98365 | 1923692 | 1.91 | 0.82 | 0.03 | 0 | 0 | |
41 | 0 | Immune1 | all | Cd68 | 12514 | 88342 | 1.9 | 0.87 | 0.05 | 0 | 0 | |
41 | 0 | Immune1 | all | Aif1 | 11629 | 1343098 | 1.9 | 0.78 | 0.04 | 0 | 0 | |
41 | 0 | Immune1 | all | Unc93b1 | 54445 | 1859307 | 1.88 | 0.93 | 0.15 | 0 | 0 | |
41 | 0 | Immune1 | all | Rgs10 | 67865 | 1915115 | 1.87 | 0.89 | 0.06 | 0 | 0 | |
41 | 0 | Immune1 | all | C5ar1 | 12273 | 88232 | 1.85 | 0.71 | 0.02 | 0 | 0 | |
41 | 0 | Immune1 | all | P2ry6 | 233571 | 2673874 | 1.85 | 0.85 | 0.03 | 0 | 0 | |
41 | 0 | Immune1 | all | Pld4 | 104759 | 2144765 | 1.81 | 0.87 | 0.05 | 0 | 0 | |
41 | 0 | Immune1 | all | Lcp1 | 18826 | 104808 | 1.81 | 0.91 | 0.12 | 0 | 0 | |
41 | 0 | Immune1 | all | Cybb | 13058 | 88574 | 1.71 | 0.85 | 0.05 | 0 | 0 | |
41 | 0 | Immune1 | all | Cd52 | 23833 | 1346088 | 1.71 | 1 | 0.19 | 0 | 0 | |
41 | 0 | Immune1 | all | Cxcl16 | 66102 | 1932682 | 1.67 | 0.86 | 0.2 | 0 | 0 | |
41 | 0 | Immune1 | all | Fyb | 23880 | 1346327 | 1.65 | 0.84 | 0.12 | 0 | 0 | |
41 | 0 | Immune1 | all | Spi1 | 20375 | 98282 | 1.65 | 0.84 | 0.05 | 0 | 0 | |
41 | 0 | Immune1 | all | Scimp | 327957 | 3610314 | 1.61 | 0.72 | 0.02 | 0 | 0 | |
41 | 0 | Immune1 | all | Csf2ra | 12982 | 1339754 | 1.59 | 0.78 | 0.11 | 0 | 0 | |
41 | 0 | Immune1 | all | Mmp12 | 17381 | 97005 | 1.59 | 0.4 | 0.01 | 0 | 0 | |
41 | 0 | Immune1 | all | Fcgr4 | 246256 | 2179523 | 1.59 | 0.65 | 0.02 | 0 | 0 | |
41 | 0 | Immune1 | all | Pid1 | 98496 | 2138391 | 1.59 | 0.78 | 0.05 | 0 | 0 | |
41 | 0 | Immune1 | all | Lst1 | 16988 | 1096324 | 1.58 | 0.73 | 0.05 | 0 | 0 |