Marker Genes

Dataset: Characterization of germ cell differentiation in the male mouse through single-cell RNA sequencing

  • tissue: Testis
  • ontology: Testis
  • genotype:
  • stage:
  • treatment condition:
  • cell/nucleus:
  • pmid: 29695820
  • subset name: all
  • total genes:
  • clustering:
  • pseudotime:
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
118 6 SC1 all Ssxb1 67985 1915235 -3.86 0.00020351
118 6 SC1 all Ssxb2 387132 2446771 -4.19 8.7e-05
118 6 SC1 all Gm12695 620779 3650206 -4.19 0.00015136
118 6 SC1 all Gm6588 625464 3648937 -4.32 2.98e-05
118 6 SC1 all Gm3453 100041651 3781629 -5.3 2.47e-06
118 6 SC1 all Zfp819 74400 1921650 -3.04 0.00281437
118 6 SC1 all Gm3149 100041119 3781328 -4.54 4.5e-05
118 6 SC1 all Gm5797 545013 3646487 -3.77 0.0001639
118 6 SC1 all Gm8362 666918 3648195 -4.27 3.47e-05
118 6 SC1 all Gm3476 100041702 3781652 -4.57 1.98e-05
118 6 SC1 all Ccdc166 223648 1925902 -2.69 0.00581852
118 6 SC1 all 4930518J21Rik 75123 1922373 -4.23 0.00014973
118 6 SC1 all 4933412L11Rik 74078 1921328 3.51 1.12e-14
118 6 SC1 all 4930433I11Rik 243944 2685327 -3.87 0.00011699
118 6 SC1 all Zc2hc1a 67306 1914556 -1 0.43
118 6 SC1 all Gm3573 100041910 3781750 -5.83 1.23e-06
118 6 SC1 all Spertl 66732 1913982 -3.79 0.00015683
118 6 SC1 all Pou5f2 75507 1922757 -0.33 1
118 6 SC1 all 4921509C19Rik 381393 2685851 -3.91 0.0008432
118 6 SC1 all Hemgn 93966 2136910 -2.98 0.00351587
118 6 SC1 all Ube2t 67196 1914446 2.33 1.12e-06
118 6 SC1 all 4930405D11Rik 73922 1921172 -3.7 0.00060695
118 6 SC1 all RP23- 100M12.7 NULL -3.45 0.0009345
118 6 SC1 all L3mbtl2 214669 2443584 1.33 0.01
118 6 SC1 all Cdyl 12593 1339956 -3.44 0.00035802
118 6 SC1 all Phf2 18676 1338034 0.94 0.11
118 6 SC1 all Bcl2l12 75736 1922986 1.95 6.86e-05
118 6 SC1 all 4930407I10Rik 328573 2685593 -2.69 0.00693581
118 6 SC1 all Lhb 16866 96782 -3.76 0.00027536
118 6 SC1 all Trim80 432613 3588186 -3.32 0.00068896
118 6 SC1 all 4930570D08Rik 78225 1925475 -3.38 0.0004289
118 6 SC1 all Gm3676 100042114 3781852 -4.96 4.92e-06
118 6 SC1 all Sap30 60406 1929129 2.02 4.62e-05
118 6 SC1 all Elfn2 207393 3608416 3.78 4.38e-14
118 6 SC1 all Slc25a14 20523 1330823 -3.52 0.02
118 6 SC1 all Mllt10 17354 1329038 2.47 1.18e-07
118 6 SC1 all H2al3 385317 1922521 -2.67 0.00521745
118 6 SC1 all Prss37 67690 1914940 -2.83 0.00414588
118 6 SC1 all Hmgb1- rs17 NULL -2.93 0.0027381
118 6 SC1 all Mgll 23945 1346042 2.43 4.99e-07
118 6 SC1 all Rora 19883 104661 -1.98 0.05
118 6 SC1 all Tepp 73407 1920657 -3.29 0.00060191
118 6 SC1 all Saxo1 75811 1923061 -2.92 0.00318546
118 6 SC1 all Pcbp1 23983 1345635 2.17 6.49e-06
118 6 SC1 all 4930581F22Rik 78934 1926184 1.24 0.03
118 6 SC1 all 4921507P07Rik 70821 1918071 -2.85 0.00281324
118 6 SC1 all Asns 27053 1350929 -2.77 0.00469976
118 6 SC1 all Tuba8 53857 1858225 -3.54 0.00046184
118 6 SC1 all Fbxo39 628100 3505735 -4 0.00013873
118 6 SC1 all Pole2 18974 1197514 -3.76 0.00024263
118 6 SC1 all 1700034E13Rik 78414 1925664 -3.13 0.00096576
118 6 SC1 all Foxj1 15223 1347474 -3.47 0.00041626
118 6 SC1 all Sox5os3 66760 1914010 -3.07 0.00173468
118 6 SC1 all Gm136 214568 2684982 -3.66 0.00028622
118 6 SC1 all D130017N08Rik 320064 2443273 2.85 1.1e-09
118 6 SC1 all 1700016C15Rik 69428 1916678 -3.31 0.00074429
118 6 SC1 all 1700101O22Rik 73575 1920825 -3.57 0.00036531
118 6 SC1 all Trp53tg5 73603 1920853 -2.88 0.00338382
118 6 SC1 all Pex5l 58869 1916672 -3.46 0.00060659
118 6 SC1 all Scp2 20280 98254 -0.68 0.76
118 6 SC1 all Gm5893 545936 3645761 -2.27 0.02
118 6 SC1 all Banf2 403171 2684961 -3.28 0.00071984
118 6 SC1 all Slfnl1 194219 3045330 -3.16 0.00075509
118 6 SC1 all 1700065J18Rik 73455 1920705 -2.93 0.00407693
118 6 SC1 all Tomm34 67145 1914395 1.8 0.00035995
118 6 SC1 all Asb17 66772 1914022 -3.32 0.00046448
118 6 SC1 all Ccsap 73420 1920670 -3.17 0.00085188
118 6 SC1 all 1700025C18Rik 72211 1919461 -2.4 0.02
118 6 SC1 all Tmem144 70652 1917902 -3.88 0.00026915
118 6 SC1 all Gask1b 68659 1915909 -3.39 0.00147231
118 6 SC1 all Prss51 100504162 1921465 -2.83 0.00556963
118 6 SC1 all Mrps36 66128 1913378 -0.99 0.44
118 6 SC1 all 1700012D16Rik 75489 1922739 -3.01 0.00392488
118 6 SC1 all Abhd16b 241850 3607711 -3.7 0.00033387
118 6 SC1 all Cabs1 70977 1918227 -3.19 0.00078096
118 6 SC1 all 1700008N11Rik 75442 1922692 -3 0.00245392
118 6 SC1 all H1fnt 70069 1917319 -3.14 0.00071984
118 6 SC1 all Iqcf1 74267 1921517 -3.01 0.00117424
118 6 SC1 all Tmco5b 75275 1922525 -3.4 0.00179763
118 6 SC1 all Gm37406 105244029 5610634 -3.66 0.00144666
118 6 SC1 all Cd59a 12509 109177 -3.3 0.00193614
118 6 SC1 all Fbxo9 71538 1918788 2.95 4.73e-11
118 6 SC1 all Gm45025 5753601 -2.8 0.00993904
118 6 SC1 all Tac1 21333 98474 -4.5 6.61e-05
118 6 SC1 all Klk1b7-ps 16604 892027 -3.05 0.00176666
118 6 SC1 all Sppl2c 237958 3045264 -2.55 0.00674865
118 6 SC1 all Anp32b 67628 1914878 3.98 4.38e-14
118 6 SC1 all Gpn1 74254 1921504 -0.34 1
118 6 SC1 all Ccdc185 433386 3618292 -2.88 0.0029229
118 6 SC1 all Gprc5b 64297 1927596 -3.39 0.0006444
118 6 SC1 all Fam71a 619288 3588202 -3.29 0.00102386
118 6 SC1 all Cst13 69294 1916544 -2.64 0.00810512
118 6 SC1 all Piwil1 57749 1928897 3.7 4.38e-14
118 6 SC1 all Ppp1r2-ps7 76705 1923955 -2.88 0.00257622
118 6 SC1 all Gm6760 627470 3643199 -3.03 0.00144704
118 6 SC1 all Ube4bos3 74310 1921560 -3.74 0.00037949
118 6 SC1 all Lypd11 210155 3643098 3.16 9.43e-13
118 6 SC1 all Cst8 13012 107161 -3.09 0.0008979
118 6 SC1 all Vbp1 22327 1333804 -2.77 0.01
118 6 SC1 all Noxred1 71275 1918525 -2.28 0.02