Marker Genes

Dataset: Single-cell transcriptome analysis reveals differential nutrient absorption functions in human intestine

  • tissue: Intestine
  • ontology: Intestine
  • genotype:
  • stage:
  • treatment condition:
  • cell/nucleus:
  • pmid: 31753849
  • subset name: Colon
  • total genes:
  • clustering:
  • pseudotime:
  • link:

Rows:89
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
117 4 enteroendocrine Colon PAM 5066 8596 1.18 0.66 0.03 0
117 4 enteroendocrine Colon MS4A8 83661 13380 1 0.77 0.22 0
117 4 enteroendocrine Colon SCGN 10590 16941 1.26 0.61 0.001 0
117 4 enteroendocrine Colon MDK 4192 6972 1.58 0.94 0.47 0
117 4 enteroendocrine Colon RPS9 6203 10442 0.32 1 0.99 0
117 4 enteroendocrine Colon TUBA1A 7846 20766 1.47 0.61 0.03 0
117 4 enteroendocrine Colon PCSK1N 27344 17301 3.03 0.61 0.04 0
117 4 enteroendocrine Colon MARCKSL1 65108 7142 0.67 1 0.88 0
117 4 enteroendocrine Colon GPX4 2879 4556 0.6 1 0.88 0
117 4 enteroendocrine Colon PTMS 5763 9629 0.67 1 0.58 0
117 4 enteroendocrine Colon KCTD12 115207 14678 0.83 0.61 0.04 0
117 4 enteroendocrine Colon INSM1 3642 6090 1.33 0.55 0.002 0
117 4 enteroendocrine Colon KIF9 64147 16666 0.29 0.94 0.37 0
117 4 enteroendocrine Colon CPE 1363 2303 1.06 0.55 0.01 0
117 4 enteroendocrine Colon NBDY 550643 50713 0.35 0.94 0.48 0
117 4 enteroendocrine Colon SAT2 112483 23160 0.33 1 0.51 0
117 4 enteroendocrine Colon CHGA 1113 1929 3.78 0.55 0.03 0
117 4 enteroendocrine Colon UCP2 7351 12518 0.65 0.72 0.2 0
117 4 enteroendocrine Colon C12orf75 387882 35164 0.85 1 0.53 0
117 4 enteroendocrine Colon BTG2 7832 1131 1.34 1 0.65 0
117 4 enteroendocrine Colon EIF3F 8665 3275 0.4 1 0.84 0
117 4 enteroendocrine Colon RPL41 6171 10354 0.25 1 1 0
117 4 enteroendocrine Colon BEX2 84707 30933 0.49 0.66 0.17 0
117 4 enteroendocrine Colon RPL3 6122 10332 0.38 1 0.99 0
117 4 enteroendocrine Colon BEX3 27018 13388 0.6 0.88 0.61 0
117 4 enteroendocrine Colon ODC1 4953 8109 0.46 0.94 0.62 0
117 4 enteroendocrine Colon SLC25A6 293 10992 0.34 1 0.98 0
117 4 enteroendocrine Colon FEV 54738 18562 1.43 0.5 0.004 0
117 4 enteroendocrine Colon CRYBA2 1412 2395 0.89 0.5 0.006 0
117 4 enteroendocrine Colon CACNA1A 773 1388 0.77 0.5 0.006 0
117 4 enteroendocrine Colon RIIAD1 284485 26686 0.46 0.5 0.005 0
117 4 enteroendocrine Colon OAZ2 4947 8096 0.35 0.77 0.28 0
117 4 enteroendocrine Colon ELF2 1998 3317 0.36 0.72 0.22 0
117 4 enteroendocrine Colon TPPP3 51673 24162 0.91 0.55 0.06 0
117 4 enteroendocrine Colon NR4A2 4929 7981 0.49 0.77 0.31 0
117 4 enteroendocrine Colon PLA2G12A 81579 18554 0.42 0.83 0.5 0
117 4 enteroendocrine Colon RPS13 6207 10386 0.32 1 0.99 0
117 4 enteroendocrine Colon SNRPN 6638 11164 0.39 0.72 0.23 0
117 4 enteroendocrine Colon GUCY2C 2984 4688 0.58 0.83 0.34 0
117 4 enteroendocrine Colon HOXB9 3219 5120 0.55 0.88 0.46 0
117 4 enteroendocrine Colon RNASEH2C 84153 24116 0.38 0.88 0.44 0
117 4 enteroendocrine Colon CD74 972 1697 0.35 1 0.65 0
117 4 enteroendocrine Colon HINT3 135114 18468 0.27 0.72 0.21 0
117 4 enteroendocrine Colon STMP1 647087 41909 0.3 1 0.66 0
117 4 enteroendocrine Colon SEC11C 90701 23400 0.93 0.94 0.6 0
117 4 enteroendocrine Colon RPS2 6187 10404 0.4 1 0.99 0
117 4 enteroendocrine Colon SNHG9 735301 33102 0.74 0.83 0.4 0
117 4 enteroendocrine Colon RAB26 25837 14259 0.45 0.5 0.04 0
117 4 enteroendocrine Colon RPL7 6129 10363 0.35 1 0.99 0
117 4 enteroendocrine Colon NOVA1 4857 7886 0.32 0.5 0.04 0
117 4 enteroendocrine Colon H1FX 8971 4722 0.41 0.83 0.36 0
117 4 enteroendocrine Colon C7orf50 84310 22421 0.3 0.88 0.51 0
117 4 enteroendocrine Colon MIF 4282 7097 0.4 0.94 0.87 0
117 4 enteroendocrine Colon RPL6 6128 10362 0.32 1 0.97 0
117 4 enteroendocrine Colon KMT2A 4297 7132 0.26 0.72 0.23 0
117 4 enteroendocrine Colon MIR7-3HG 284424 30049 0.54 0.44 0.001 0
117 4 enteroendocrine Colon SS18L2 51188 15593 0.39 0.88 0.43 0
117 4 enteroendocrine Colon TRIQK 286144 27828 0.32 0.72 0.26 0
117 4 enteroendocrine Colon RPL15 6138 10306 0.32 1 0.99 0
117 4 enteroendocrine Colon ZSCAN16-AS1 100129195 48982 0.51 0.61 0.17 0
117 4 enteroendocrine Colon NAP1L1 4673 7637 0.34 1 0.62 0
117 4 enteroendocrine Colon PRDX5 25824 9355 0.42 1 0.97 0
117 4 enteroendocrine Colon BIN1 274 1052 0.26 0.83 0.35 0
117 4 enteroendocrine Colon SCG5 6447 10816 1.37 0.44 0.01 0
117 4 enteroendocrine Colon STMN1 3925 6510 0.69 0.77 0.37 0
117 4 enteroendocrine Colon BNIP3 664 1084 0.29 0.5 0.06 0
117 4 enteroendocrine Colon PEMT 10400 8830 0.31 0.66 0.22 0
117 4 enteroendocrine Colon NHP2 55651 14377 0.3 0.94 0.74 0
117 4 enteroendocrine Colon PYY 5697 9748 4.81 0.5 0.07 0
117 4 enteroendocrine Colon GABARAP 11337 4067 0.55 1 0.85 0
117 4 enteroendocrine Colon EGR1 1958 3238 0.98 0.94 0.76 0
117 4 enteroendocrine Colon EID1 23741 1191 0.47 0.88 0.61 0
117 4 enteroendocrine Colon LLNLR-245B6.1 NULL 0.33 0.77 0.31 0
117 4 enteroendocrine Colon MYL6B 140465 29823 0.49 0.66 0.23 0
117 4 enteroendocrine Colon MSL1 339287 27905 0.26 0.72 0.26 0
117 4 enteroendocrine Colon HMGN3 9324 12312 0.65 0.94 0.7 0
117 4 enteroendocrine Colon SMIM6 100130933 40032 0.44 0.5 0.09 0
117 4 enteroendocrine Colon FUS 2521 4010 0.42 1 0.73 0
117 4 enteroendocrine Colon CALM1 801 1442 0.35 1 0.95 0
117 4 enteroendocrine Colon BNIP3L 665 1085 0.32 0.66 0.27 0
117 4 enteroendocrine Colon PDAP1 11333 14634 0.3 0.88 0.62 0
117 4 enteroendocrine Colon CCNB1IP1 57820 19437 0.27 0.77 0.34 0
117 4 enteroendocrine Colon MZT2B 80097 25886 0.3 1 0.9 0
117 4 enteroendocrine Colon GNG4 2786 4407 0.45 0.44 0.03 0
117 4 enteroendocrine Colon PCF11 51585 30097 0.39 0.77 0.36 0
117 4 enteroendocrine Colon SNRNP25 79622 14161 0.26 0.83 0.45 0
117 4 enteroendocrine Colon CERS6 253782 23826 0.26 0.88 0.49 0
117 4 enteroendocrine Colon DDA1 79016 28360 0.34 0.77 0.34 0
117 4 enteroendocrine Colon ARFGEF3 57221 21213 0.29 0.66 0.22 0