Marker Genes
Dataset: Novel Human Kidney Cell Subsets Identified by Mux-Seq
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Adult
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 9000000002
- subset name: all
- total genes: 33694
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.biorxiv.org/content/10.1101/2020.03.02.973925v1.full
Rows:103
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
110 | 4 | PT 2 | Proximal tubule | all | CLU | 1191 | 2095 | 1.41 | 0.75 | 0.49 | 0 | 0 |
110 | 4 | PT 2 | Proximal tubule | all | CRYAB | 1410 | 2389 | 1.3 | 0.8 | 0.39 | 0 | 0 |
110 | 4 | PT 2 | Proximal tubule | all | RBP4 | 5950 | 9922 | 1.16 | 0.25 | 0.03 | 0 | 0 |
110 | 4 | PT 2 | Proximal tubule | all | UGT2B7 | 7364 | 12554 | 1.05 | 0.49 | 0.16 | 0 | 0 |
110 | 4 | PT 2 | Proximal tubule | all | ADIRF | 10974 | 24043 | 1.05 | 0.75 | 0.44 | 0 | 0 |
110 | 4 | PT 2 | Proximal tubule | all | SERPINA1 | 5265 | 8941 | 1.03 | 0.33 | 0.11 | 5.68e-237 | 1.91e-232 |
110 | 4 | PT 2 | Proximal tubule | all | PIGR | 5284 | 8968 | 1.03 | 0.54 | 0.25 | 4.09e-280 | 1.38e-275 |
110 | 4 | PT 2 | Proximal tubule | all | VCAM1 | 7412 | 12663 | 0.99 | 0.39 | 0.11 | 0 | 0 |
110 | 4 | PT 2 | Proximal tubule | all | LINC01320 | 104355288 | 50526 | 0.94 | 0.43 | 0.19 | 2.79e-228 | 9.4e-224 |
110 | 4 | PT 2 | Proximal tubule | all | C19orf33 | 64073 | 16668 | 0.9 | 0.33 | 0.09 | 0 | 0 |
110 | 4 | PT 2 | Proximal tubule | all | ACSM2A | 123876 | 32017 | 0.88 | 0.39 | 0.1 | 0 | 0 |
110 | 4 | PT 2 | Proximal tubule | all | ANXA1 | 301 | 533 | 0.86 | 0.42 | 0.2 | 2.02e-184 | 6.82e-180 |
110 | 4 | PT 2 | Proximal tubule | all | TNFSF10 | 8743 | 11925 | 0.86 | 0.38 | 0.17 | 3.08e-185 | 1.04e-180 |
110 | 4 | PT 2 | Proximal tubule | all | CREB5 | 9586 | 16844 | 0.85 | 0.36 | 0.13 | 1.1e-236 | 3.7e-232 |
110 | 4 | PT 2 | Proximal tubule | all | FHL1 | 2273 | 3702 | 0.84 | 0.25 | 0.08 | 1.31e-194 | 4.42e-190 |
110 | 4 | PT 2 | Proximal tubule | all | SOX9 | 6662 | 11204 | 0.84 | 0.38 | 0.15 | 1.52e-203 | 5.12e-199 |
110 | 4 | PT 2 | Proximal tubule | all | IL32 | 9235 | 16830 | 0.83 | 0.54 | 0.23 | 9.8e-296 | 3.3e-291 |
110 | 4 | PT 2 | Proximal tubule | all | RHEX | 440712 | 25341 | 0.8 | 0.29 | 0.08 | 5.9e-272 | 1.99e-267 |
110 | 4 | PT 2 | Proximal tubule | all | SOX4 | 6659 | 11200 | 0.79 | 0.57 | 0.38 | 4.26e-138 | 1.43e-133 |
110 | 4 | PT 2 | Proximal tubule | all | AKAP12 | 9590 | 370 | 0.73 | 0.33 | 0.13 | 2.23e-182 | 7.52e-178 |
110 | 4 | PT 2 | Proximal tubule | all | KRT7 | 3855 | 6445 | 0.7 | 0.38 | 0.2 | 1.14e-124 | 3.85e-120 |
110 | 4 | PT 2 | Proximal tubule | all | ITGB8 | 3696 | 6163 | 0.68 | 0.35 | 0.17 | 5.82e-138 | 1.96e-133 |
110 | 4 | PT 2 | Proximal tubule | all | RETREG1 | 54463 | 25964 | 0.67 | 0.31 | 0.15 | 3.26e-124 | 1.1e-119 |
110 | 4 | PT 2 | Proximal tubule | all | SPATS2L | 26010 | 24574 | 0.66 | 0.4 | 0.23 | 4.55e-100 | 1.53e-95 |
110 | 4 | PT 2 | Proximal tubule | all | GATM | 2628 | 4175 | 0.65 | 0.42 | 0.17 | 1.15e-203 | 3.86e-199 |
110 | 4 | PT 2 | Proximal tubule | all | CLIC4 | 25932 | 13518 | 0.65 | 0.32 | 0.14 | 2.24e-143 | 7.53e-139 |
110 | 4 | PT 2 | Proximal tubule | all | MT1E | 4493 | 7397 | 0.64 | 0.57 | 0.41 | 6.6e-102 | 2.22e-97 |
110 | 4 | PT 2 | Proximal tubule | all | TPM1 | 7168 | 12010 | 0.62 | 0.56 | 0.36 | 3.87e-141 | 1.3e-136 |
110 | 4 | PT 2 | Proximal tubule | all | TMSB10 | 9168 | 11879 | 0.61 | 0.94 | 0.79 | 1.83e-291 | 6.18e-287 |
110 | 4 | PT 2 | Proximal tubule | all | KRT18 | 3875 | 6430 | 0.61 | 0.47 | 0.33 | 6.32e-85 | 2.13e-80 |
110 | 4 | PT 2 | Proximal tubule | all | TMEM176A | 55365 | 24930 | 0.59 | 0.33 | 0.19 | 3.18e-80 | 1.07e-75 |
110 | 4 | PT 2 | Proximal tubule | all | KLF6 | 1316 | 2235 | 0.59 | 0.65 | 0.52 | 7.96e-101 | 2.68e-96 |
110 | 4 | PT 2 | Proximal tubule | all | SLPI | 6590 | 11092 | 0.58 | 0.28 | 0.15 | 4.85e-68 | 1.64e-63 |
110 | 4 | PT 2 | Proximal tubule | all | TMEM176B | 28959 | 29596 | 0.54 | 0.33 | 0.2 | 2.16e-66 | 7.27e-62 |
110 | 4 | PT 2 | Proximal tubule | all | OCIAD2 | 132299 | 28685 | 0.54 | 0.4 | 0.27 | 9.19e-72 | 3.1e-67 |
110 | 4 | PT 2 | Proximal tubule | all | TFPI | 7035 | 11760 | 0.53 | 0.28 | 0.14 | 7e-89 | 2.36e-84 |
110 | 4 | PT 2 | Proximal tubule | all | UGCG | 7357 | 12524 | 0.52 | 0.32 | 0.19 | 3.46e-69 | 1.17e-64 |
110 | 4 | PT 2 | Proximal tubule | all | PDZK1IP1 | 10158 | 16887 | 0.52 | 0.41 | 0.2 | 7.28e-130 | 2.45e-125 |
110 | 4 | PT 2 | Proximal tubule | all | MT1X | 4501 | 7405 | 0.51 | 0.57 | 0.39 | 1.76e-112 | 5.92e-108 |
110 | 4 | PT 2 | Proximal tubule | all | EZR | 7430 | 12691 | 0.51 | 0.46 | 0.33 | 6.23e-65 | 2.1e-60 |
110 | 4 | PT 2 | Proximal tubule | all | TSPAN1 | 10103 | 20657 | 0.51 | 0.38 | 0.26 | 1.09e-59 | 3.66e-55 |
110 | 4 | PT 2 | Proximal tubule | all | ATF3 | 467 | 785 | 0.5 | 0.43 | 0.31 | 2.92e-54 | 9.84e-50 |
110 | 4 | PT 2 | Proximal tubule | all | VMP1 | 81671 | 29559 | 0.48 | 0.52 | 0.39 | 4.44e-63 | 1.5e-58 |
110 | 4 | PT 2 | Proximal tubule | all | RHOB | 388 | 668 | 0.48 | 0.64 | 0.5 | 5.62e-83 | 1.89e-78 |
110 | 4 | PT 2 | Proximal tubule | all | EGR1 | 1958 | 3238 | 0.47 | 0.61 | 0.52 | 1.64e-56 | 5.52e-52 |
110 | 4 | PT 2 | Proximal tubule | all | CLDN4 | 1364 | 2046 | 0.47 | 0.36 | 0.24 | 8.04e-57 | 2.71e-52 |
110 | 4 | PT 2 | Proximal tubule | all | ZFP36L1 | 677 | 1107 | 0.46 | 0.62 | 0.54 | 2.19e-67 | 7.37e-63 |
110 | 4 | PT 2 | Proximal tubule | all | CXCL14 | 9547 | 10640 | 0.46 | 0.56 | 0.3 | 1.6e-166 | 5.38e-162 |
110 | 4 | PT 2 | Proximal tubule | all | CLDN3 | 1365 | 2045 | 0.45 | 0.28 | 0.17 | 2.93e-47 | 9.89e-43 |
110 | 4 | PT 2 | Proximal tubule | all | BICC1 | 80114 | 19351 | 0.45 | 0.3 | 0.19 | 1.32e-46 | 4.43e-42 |
110 | 4 | PT 2 | Proximal tubule | all | MMP7 | 4316 | 7174 | 0.45 | 0.47 | 0.28 | 2.29e-99 | 7.72e-95 |
110 | 4 | PT 2 | Proximal tubule | all | VIM | 7431 | 12692 | 0.44 | 0.5 | 0.29 | 4.45e-113 | 1.5e-108 |
110 | 4 | PT 2 | Proximal tubule | all | CD24 | 100133941 | 1645 | 0.44 | 0.78 | 0.64 | 1.06e-112 | 3.59e-108 |
110 | 4 | PT 2 | Proximal tubule | all | KRT19 | 3880 | 6436 | 0.44 | 0.34 | 0.27 | 1.61e-21 | 5.42e-17 |
110 | 4 | PT 2 | Proximal tubule | all | MGST1 | 4257 | 7061 | 0.43 | 0.34 | 0.2 | 1.14e-67 | 3.83e-63 |
110 | 4 | PT 2 | Proximal tubule | all | IGFBP6 | 3489 | 5475 | 0.42 | 0.26 | 0.12 | 2.59e-84 | 8.73e-80 |
110 | 4 | PT 2 | Proximal tubule | all | LAPTM4A | 9741 | 6924 | 0.42 | 0.64 | 0.55 | 6.04e-69 | 2.03e-64 |
110 | 4 | PT 2 | Proximal tubule | all | CRIP1 | 1396 | 2360 | 0.41 | 0.39 | 0.26 | 1.58e-53 | 5.34e-49 |
110 | 4 | PT 2 | Proximal tubule | all | KRT8 | 3856 | 6446 | 0.41 | 0.35 | 0.26 | 8e-36 | 2.69e-31 |
110 | 4 | PT 2 | Proximal tubule | all | DAB2 | 1601 | 2662 | 0.41 | 0.34 | 0.22 | 2.12e-47 | 7.14e-43 |
110 | 4 | PT 2 | Proximal tubule | all | ERRFI1 | 54206 | 18185 | 0.41 | 0.26 | 0.17 | 9.51e-34 | 3.21e-29 |
110 | 4 | PT 2 | Proximal tubule | all | NFKBIZ | 64332 | 29805 | 0.41 | 0.41 | 0.3 | 9.73e-43 | 3.28e-38 |
110 | 4 | PT 2 | Proximal tubule | all | MT1G | 4495 | 7399 | 0.4 | 0.62 | 0.37 | 2.33e-176 | 7.84e-172 |
110 | 4 | PT 2 | Proximal tubule | all | HSPB1 | 3315 | 5246 | 0.4 | 0.78 | 0.66 | 3.42e-92 | 1.15e-87 |
110 | 4 | PT 2 | Proximal tubule | all | NUPR1 | 26471 | 29990 | 0.39 | 0.26 | 0.15 | 2.47e-42 | 8.31e-38 |
110 | 4 | PT 2 | Proximal tubule | all | NFIB | 4781 | 7785 | 0.39 | 0.28 | 0.2 | 5.57e-32 | 1.88e-27 |
110 | 4 | PT 2 | Proximal tubule | all | EMX2 | 2018 | 3341 | 0.39 | 0.51 | 0.39 | 2.06e-51 | 6.95e-47 |
110 | 4 | PT 2 | Proximal tubule | all | TXN | 7295 | 12435 | 0.39 | 0.47 | 0.4 | 2.33e-31 | 7.84e-27 |
110 | 4 | PT 2 | Proximal tubule | all | UBC | 7316 | 12468 | 0.38 | 0.64 | 0.57 | 1.67e-49 | 5.64e-45 |
110 | 4 | PT 2 | Proximal tubule | all | CCN1 | 3491 | 2654 | 0.38 | 0.25 | 0.18 | 7.69e-25 | 2.59e-20 |
110 | 4 | PT 2 | Proximal tubule | all | NFIA | 4774 | 7784 | 0.38 | 0.27 | 0.16 | 9.39e-50 | 3.16e-45 |
110 | 4 | PT 2 | Proximal tubule | all | S100A10 | 6281 | 10487 | 0.37 | 0.59 | 0.52 | 6.37e-47 | 2.15e-42 |
110 | 4 | PT 2 | Proximal tubule | all | MT2A | 4502 | 7406 | 0.37 | 0.74 | 0.63 | 2.52e-62 | 8.5e-58 |
110 | 4 | PT 2 | Proximal tubule | all | ZBTB20 | 26137 | 13503 | 0.37 | 0.29 | 0.22 | 1.03e-24 | 3.48e-20 |
110 | 4 | PT 2 | Proximal tubule | all | SOD2 | 6648 | 11180 | 0.37 | 0.38 | 0.32 | 4.32e-22 | 1.45e-17 |
110 | 4 | PT 2 | Proximal tubule | all | MT1F | 4494 | 7398 | 0.36 | 0.38 | 0.25 | 1.07e-57 | 3.62e-53 |
110 | 4 | PT 2 | Proximal tubule | all | ELF3 | 1999 | 3318 | 0.35 | 0.41 | 0.31 | 4e-35 | 1.35e-30 |
110 | 4 | PT 2 | Proximal tubule | all | FTH1 | 2495 | 3976 | 0.34 | 0.86 | 0.8 | 2.11e-85 | 7.1e-81 |
110 | 4 | PT 2 | Proximal tubule | all | HSPA1B | 3304 | 5233 | 0.34 | 0.71 | 0.64 | 3.47e-57 | 1.17e-52 |
110 | 4 | PT 2 | Proximal tubule | all | DNAJB1 | 3337 | 5270 | 0.34 | 0.5 | 0.43 | 1.46e-29 | 4.9e-25 |
110 | 4 | PT 2 | Proximal tubule | all | C11orf54 | 28970 | 30204 | 0.33 | 0.26 | 0.19 | 6.38e-22 | 2.15e-17 |
110 | 4 | PT 2 | Proximal tubule | all | MARCKS | 4082 | 6759 | 0.33 | 0.26 | 0.17 | 2.24e-33 | 7.54e-29 |
110 | 4 | PT 2 | Proximal tubule | all | ITM2B | 9445 | 6174 | 0.33 | 0.84 | 0.8 | 2.07e-74 | 6.98e-70 |
110 | 4 | PT 2 | Proximal tubule | all | JUN | 3725 | 6204 | 0.32 | 0.68 | 0.59 | 1.51e-51 | 5.08e-47 |
110 | 4 | PT 2 | Proximal tubule | all | SMIM24 | 284422 | 37244 | 0.31 | 0.36 | 0.29 | 1.14e-18 | 3.85e-14 |
110 | 4 | PT 2 | Proximal tubule | all | NEAT1 | 283131 | 30815 | 0.31 | 0.93 | 0.89 | 1.7e-90 | 5.73e-86 |
110 | 4 | PT 2 | Proximal tubule | all | HSPA1A | 3303 | 5232 | 0.3 | 0.7 | 0.6 | 2.31e-55 | 7.77e-51 |
110 | 4 | PT 2 | Proximal tubule | all | ZFP36 | 7538 | 12862 | 0.3 | 0.52 | 0.43 | 2.54e-32 | 8.57e-28 |
110 | 4 | PT 2 | Proximal tubule | all | TLE4 | 7091 | 11840 | 0.29 | 0.25 | 0.19 | 1.19e-16 | 4.02e-12 |
110 | 4 | PT 2 | Proximal tubule | all | RPS27L | 51065 | 18476 | 0.29 | 0.6 | 0.53 | 5.58e-32 | 1.88e-27 |
110 | 4 | PT 2 | Proximal tubule | all | ARF6 | 382 | 659 | 0.29 | 0.37 | 0.32 | 9.6e-16 | 3.24e-11 |
110 | 4 | PT 2 | Proximal tubule | all | HLA-A | 3105 | 4931 | 0.28 | 0.56 | 0.5 | 1.03e-31 | 3.48e-27 |
110 | 4 | PT 2 | Proximal tubule | all | CNDP2 | 55748 | 24437 | 0.28 | 0.26 | 0.19 | 1.75e-17 | 5.88e-13 |
110 | 4 | PT 2 | Proximal tubule | all | DNAJB4 | 11080 | 14886 | 0.28 | 0.25 | 0.18 | 1.13e-17 | 3.8e-13 |
110 | 4 | PT 2 | Proximal tubule | all | MT1H | 4496 | 7400 | 0.27 | 0.25 | 0.14 | 1.64e-48 | 5.51e-44 |
110 | 4 | PT 2 | Proximal tubule | all | IER2 | 9592 | 28871 | 0.27 | 0.5 | 0.43 | 2.77e-25 | 9.35e-21 |
110 | 4 | PT 2 | Proximal tubule | all | HSPE1 | 3336 | 5269 | 0.27 | 0.51 | 0.48 | 4.04e-16 | 1.36e-11 |
110 | 4 | PT 2 | Proximal tubule | all | GPX4 | 2879 | 4556 | 0.26 | 0.48 | 0.44 | 1.06e-16 | 3.56e-12 |
110 | 4 | PT 2 | Proximal tubule | all | IFI27 | 3429 | 5397 | 0.26 | 0.29 | 0.16 | 5.83e-55 | 1.97e-50 |
110 | 4 | PT 2 | Proximal tubule | all | GADD45A | 1647 | 4095 | 0.26 | 0.26 | 0.22 | 1.72e-10 | 5.78e-06 |
110 | 4 | PT 2 | Proximal tubule | all | CITED2 | 10370 | 1987 | 0.25 | 0.27 | 0.22 | 6.1e-13 | 2.06e-08 |
110 | 4 | PT 2 | Proximal tubule | all | WTAP | 9589 | 16846 | 0.25 | 0.28 | 0.25 | 5.3e-08 | 0.001786808168732 |
110 | 4 | PT 2 | Proximal tubule | all | ANXA2 | 302 | 537 | 0.25 | 0.39 | 0.32 | 9.05e-19 | 3.05e-14 |