Marker Genes
Dataset: Novel Human Kidney Cell Subsets Identified by Mux-Seq
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Adult
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 9000000002
- subset name: all
- total genes: 33694
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.biorxiv.org/content/10.1101/2020.03.02.973925v1.full
Rows:37
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
110 | 36 | B cells | all | IGKC | 3514 | 5716 | 6.51 | 0.48 | 0.02 | 6.99e-92 | 2.36e-87 | |
110 | 36 | B cells | all | IGLC2 | 3538 | 5856 | 6.49 | 0.44 | 0.01 | 4.48e-209 | 1.51e-204 | |
110 | 36 | B cells | all | IGLC3 | 3539 | 5857 | 6.08 | 0.4 | 0.007 | 1.59e-246 | 5.37e-242 | |
110 | 36 | B cells | all | IGHG1 | 3500 | 5525 | 5.52 | 0.6 | 0.005 | 0 | 0 | |
110 | 36 | B cells | all | IGHG3 | 3502 | 5527 | 5.51 | 0.62 | 0.005 | 0 | 0 | |
110 | 36 | B cells | all | IGHM | 3507 | 5541 | 5.31 | 0.28 | 0.006 | 3.6e-135 | 1.21e-130 | |
110 | 36 | B cells | all | JCHAIN | 3512 | 5713 | 5.28 | 0.66 | 0.007 | 0 | 0 | |
110 | 36 | B cells | all | IGHG2 | 3501 | 5526 | 4.69 | 0.32 | 0.001 | 0 | 0 | |
110 | 36 | B cells | all | IGHG4 | 3503 | 5528 | 4.48 | 0.54 | 0.001 | 0 | 0 | |
110 | 36 | B cells | all | MZB1 | 51237 | 30125 | 2.7 | 0.76 | 0.002 | 0 | 0 | |
110 | 36 | B cells | all | SSR4 | 6748 | 11326 | 2.4 | 0.88 | 0.36 | 4.65e-32 | 1.57e-27 | |
110 | 36 | B cells | all | FKBP11 | 51303 | 18624 | 1.83 | 0.6 | 0.04 | 2.74e-82 | 9.24e-78 | |
110 | 36 | B cells | all | TNFRSF17 | 608 | 11913 | 1.71 | 0.48 | 0.001 | 0 | 0 | |
110 | 36 | B cells | all | HERPUD1 | 9709 | 13744 | 1.59 | 0.76 | 0.3 | 2.42e-19 | 8.14e-15 | |
110 | 36 | B cells | all | DERL3 | 91319 | 14236 | 1.56 | 0.46 | 0.005 | 0 | 0 | |
110 | 36 | B cells | all | SEC11C | 90701 | 23400 | 1.17 | 0.48 | 0.13 | 1.03e-15 | 3.48e-11 | |
110 | 36 | B cells | all | ISG20 | 3669 | 6130 | 1.1 | 0.36 | 0.02 | 7.1e-50 | 2.39e-45 | |
110 | 36 | B cells | all | FCRL5 | 83416 | 18508 | 1.04 | 0.3 | 0.001 | 0 | 0 | |
110 | 36 | B cells | all | CYBA | 1535 | 2577 | 0.99 | 0.74 | 0.36 | 2.46e-11 | 8.29e-07 | |
110 | 36 | B cells | all | CD27 | 939 | 11922 | 0.96 | 0.34 | 0.006 | 3.53e-195 | 1.19e-190 | |
110 | 36 | B cells | all | XBP1 | 7494 | 12801 | 0.93 | 0.44 | 0.22 | 7.55e-06 | 0.25 | |
110 | 36 | B cells | all | SELENOK | 58515 | 30394 | 0.88 | 0.5 | 0.32 | 0.001001217340378 | 1 | |
110 | 36 | B cells | all | SDF2L1 | 23753 | 10676 | 0.85 | 0.38 | 0.13 | 8.57e-08 | 0.002888836706946 | |
110 | 36 | B cells | all | PRDX4 | 10549 | 17169 | 0.79 | 0.3 | 0.1 | 1.6e-06 | 0.05 | |
110 | 36 | B cells | all | SELENOS | 55829 | 30396 | 0.77 | 0.52 | 0.29 | 4.44e-06 | 0.14 | |
110 | 36 | B cells | all | UBE2J1 | 51465 | 17598 | 0.76 | 0.32 | 0.09 | 1.15e-08 | 0.000388199157139 | |
110 | 36 | B cells | all | MANF | 7873 | 15461 | 0.72 | 0.34 | 0.12 | 1.25e-06 | 0.04 | |
110 | 36 | B cells | all | NUCB2 | 4925 | 8044 | 0.62 | 0.26 | 0.11 | 0.000673591826497 | 1 | |
110 | 36 | B cells | all | ERLEC1 | 27248 | 25222 | 0.62 | 0.32 | 0.14 | 0.000172694575959 | 1 | |
110 | 36 | B cells | all | HSP90B1 | 7184 | 12028 | 0.59 | 0.66 | 0.45 | 1.18e-05 | 0.39 | |
110 | 36 | B cells | all | CXCR4 | 7852 | 2561 | 0.57 | 0.38 | 0.12 | 4.16e-08 | 0.00140107063321 | |
110 | 36 | B cells | all | SPCS3 | 60559 | 26212 | 0.57 | 0.32 | 0.15 | 0.000472151252475 | 1 | |
110 | 36 | B cells | all | DNAJB9 | 4189 | 6968 | 0.55 | 0.3 | 0.13 | 0.000136970909562 | 1 | |
110 | 36 | B cells | all | CREB3L2 | 64764 | 23720 | 0.54 | 0.26 | 0.11 | 0.000453256160877 | 1 | |
110 | 36 | B cells | all | SPCS2 | 9789 | 28962 | 0.5 | 0.52 | 0.39 | 0.005168025032368 | 1 | |
110 | 36 | B cells | all | SRGN | 5552 | 9361 | 0.4 | 0.3 | 0.14 | 0.001267402278902 | 1 | |
110 | 36 | B cells | all | BIRC3 | 330 | 591 | 0.33 | 0.28 | 0.12 | 0.000634923679122 | 1 |