Marker Genes
Dataset: Novel Human Kidney Cell Subsets Identified by Mux-Seq
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Adult
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 9000000002
- subset name: all
- total genes: 33694
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.biorxiv.org/content/10.1101/2020.03.02.973925v1.full
Rows:24
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
110 | 3 | High Mito | all | SPP1 | 6696 | 11255 | 0.7 | 0.67 | 0.58 | 5.97e-96 | 2.01e-91 | |
110 | 3 | High Mito | all | CDH16 | 1014 | 1755 | 0.65 | 0.37 | 0.37 | 7.34e-22 | 2.47e-17 | |
110 | 3 | High Mito | all | XIST | 7503 | 12810 | 0.55 | 0.28 | 0.24 | 5.87e-20 | 1.98e-15 | |
110 | 3 | High Mito | all | S100A2 | 6273 | 10492 | 0.55 | 0.37 | 0.36 | 1.71e-08 | 0.000575194318172 | |
110 | 3 | High Mito | all | ATP8 | 4509 | 7415 | 0.54 | 0.53 | 0.52 | 3.75e-46 | 1.26e-41 | |
110 | 3 | High Mito | all | COX1 | 4512 | 7419 | 0.53 | 1 | 1 | 0 | 0 | |
110 | 3 | High Mito | all | COX3 | 4514 | 7422 | 0.51 | 1 | 1 | 0 | 0 | |
110 | 3 | High Mito | all | ND4 | 4538 | 7459 | 0.5 | 1 | 1 | 0 | 0 | |
110 | 3 | High Mito | all | CTSD | 1509 | 2529 | 0.47 | 0.44 | 0.48 | 2.78e-15 | 9.38e-11 | |
110 | 3 | High Mito | all | MTRNR2L12 | 100463498 | 37169 | 0.47 | 0.4 | 0.45 | 5.12e-07 | 0.01 | |
110 | 3 | High Mito | all | ND1 | 4535 | 7455 | 0.46 | 1 | 1 | 0 | 0 | |
110 | 3 | High Mito | all | ATP6 | 4508 | 7414 | 0.45 | 1 | 1 | 0 | 0 | |
110 | 3 | High Mito | all | MTRNR2L8 | 100463486 | 37165 | 0.44 | 0.53 | 0.6 | 6.77e-19 | 2.28e-14 | |
110 | 3 | High Mito | all | MTCO2P12 | 107075310 | 52028 | 0.41 | 1 | 1 | 0 | 0 | |
110 | 3 | High Mito | all | ND5 | 4540 | 7461 | 0.41 | 0.99 | 0.99 | 4.66e-267 | 1.57e-262 | |
110 | 3 | High Mito | all | CYTB | 4519 | 7427 | 0.4 | 1 | 1 | 0 | 0 | |
110 | 3 | High Mito | all | ND4L | 4539 | 7460 | 0.39 | 0.98 | 0.99 | 6.08e-199 | 2.05e-194 | |
110 | 3 | High Mito | all | ND3 | 4537 | 7458 | 0.36 | 1 | 1 | 1.23e-261 | 4.15e-257 | |
110 | 3 | High Mito | all | DEFB1 | 1672 | 2766 | 0.35 | 0.6 | 0.6 | 1.38e-11 | 4.64e-07 | |
110 | 3 | High Mito | all | HIF1A | 3091 | 4910 | 0.31 | 0.19 | 0.3 | 1.14e-09 | 3.83e-05 | |
110 | 3 | High Mito | all | MALAT1 | 378938 | 29665 | 0.27 | 1 | 0.99 | 4.84e-80 | 1.63e-75 | |
110 | 3 | High Mito | all | ND2 | 4536 | 7456 | 0.26 | 1 | 1 | 2.26e-216 | 7.61e-212 | |
110 | 3 | High Mito | all | METAP2 | 10988 | 16672 | 0.26 | 0.21 | 0.33 | 5.6e-14 | 1.89e-09 | |
110 | 3 | High Mito | all | PLCG2 | 5336 | 9066 | 0.25 | 0.15 | 0.25 | 4.73e-17 | 1.59e-12 |