Marker Genes
Dataset: Novel Human Kidney Cell Subsets Identified by Mux-Seq
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Adult
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 9000000002
- subset name: all
- total genes: 33694
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.biorxiv.org/content/10.1101/2020.03.02.973925v1.full
Rows:82
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
110 | 2 | PC 1 | Principal cell | all | AQP2 | 359 | 634 | 1.25 | 0.58 | 0.16 | 0 | 0 |
110 | 2 | PC 1 | Principal cell | all | SLC8A1 | 6546 | 11068 | 0.98 | 0.35 | 0.12 | 3.46e-282 | 1.17e-277 |
110 | 2 | PC 1 | Principal cell | all | CALB1 | 793 | 1434 | 0.95 | 0.39 | 0.13 | 0 | 0 |
110 | 2 | PC 1 | Principal cell | all | WFDC2 | 10406 | 15939 | 0.92 | 0.91 | 0.51 | 0 | 0 |
110 | 2 | PC 1 | Principal cell | all | MMP7 | 4316 | 7174 | 0.89 | 0.49 | 0.28 | 1.26e-169 | 4.25e-165 |
110 | 2 | PC 1 | Principal cell | all | SLPI | 6590 | 11092 | 0.81 | 0.33 | 0.15 | 1.35e-148 | 4.55e-144 |
110 | 2 | PC 1 | Principal cell | all | SMIM22 | 440335 | 48329 | 0.81 | 0.33 | 0.13 | 1e-215 | 3.37e-211 |
110 | 2 | PC 1 | Principal cell | all | FXYD4 | 53828 | 4028 | 0.8 | 0.54 | 0.22 | 0 | 0 |
110 | 2 | PC 1 | Principal cell | all | CDH16 | 1014 | 1755 | 0.8 | 0.59 | 0.35 | 3.74e-217 | 1.26e-212 |
110 | 2 | PC 1 | Principal cell | all | STC1 | 6781 | 11373 | 0.78 | 0.37 | 0.13 | 1.82e-241 | 6.13e-237 |
110 | 2 | PC 1 | Principal cell | all | AQP3 | 360 | 636 | 0.78 | 0.39 | 0.16 | 1.27e-215 | 4.28e-211 |
110 | 2 | PC 1 | Principal cell | all | ST6GAL1 | 6480 | 10860 | 0.71 | 0.25 | 0.11 | 8.13e-118 | 2.74e-113 |
110 | 2 | PC 1 | Principal cell | all | PFKFB3 | 5209 | 8874 | 0.71 | 0.28 | 0.12 | 8.02e-148 | 2.7e-143 |
110 | 2 | PC 1 | Principal cell | all | HSD11B2 | 3291 | 5209 | 0.69 | 0.41 | 0.22 | 3.5e-143 | 1.18e-138 |
110 | 2 | PC 1 | Principal cell | all | TSPAN1 | 10103 | 20657 | 0.68 | 0.42 | 0.25 | 1.8e-119 | 6.07e-115 |
110 | 2 | PC 1 | Principal cell | all | XIST | 7503 | 12810 | 0.67 | 0.43 | 0.23 | 2.68e-158 | 9.03e-154 |
110 | 2 | PC 1 | Principal cell | all | HIF1A | 3091 | 4910 | 0.65 | 0.43 | 0.29 | 3.87e-99 | 1.3e-94 |
110 | 2 | PC 1 | Principal cell | all | METAP2 | 10988 | 16672 | 0.62 | 0.44 | 0.32 | 1.48e-79 | 4.98e-75 |
110 | 2 | PC 1 | Principal cell | all | CTSD | 1509 | 2529 | 0.61 | 0.65 | 0.47 | 1.45e-175 | 4.89e-171 |
110 | 2 | PC 1 | Principal cell | all | DCDC2 | 51473 | 18141 | 0.57 | 0.26 | 0.16 | 1.2e-61 | 4.05e-57 |
110 | 2 | PC 1 | Principal cell | all | S100A2 | 6273 | 10492 | 0.57 | 0.57 | 0.35 | 1.11e-148 | 3.73e-144 |
110 | 2 | PC 1 | Principal cell | all | SPP1 | 6696 | 11255 | 0.54 | 0.74 | 0.58 | 2.36e-138 | 7.95e-134 |
110 | 2 | PC 1 | Principal cell | all | STAT1 | 6772 | 11362 | 0.53 | 0.28 | 0.17 | 2.2e-56 | 7.42e-52 |
110 | 2 | PC 1 | Principal cell | all | AIF1L | 83543 | 28904 | 0.51 | 0.36 | 0.27 | 1.78e-48 | 5.98e-44 |
110 | 2 | PC 1 | Principal cell | all | KRT19 | 3880 | 6436 | 0.5 | 0.44 | 0.26 | 1.54e-108 | 5.2e-104 |
110 | 2 | PC 1 | Principal cell | all | GATA3 | 2625 | 4172 | 0.5 | 0.26 | 0.13 | 1.64e-92 | 5.52e-88 |
110 | 2 | PC 1 | Principal cell | all | DUSP6 | 1848 | 3072 | 0.5 | 0.29 | 0.19 | 6.54e-46 | 2.2e-41 |
110 | 2 | PC 1 | Principal cell | all | DEFB1 | 1672 | 2766 | 0.48 | 0.79 | 0.59 | 2.01e-112 | 6.76e-108 |
110 | 2 | PC 1 | Principal cell | all | COX20 | 116228 | 26970 | 0.48 | 0.44 | 0.35 | 8.66e-47 | 2.92e-42 |
110 | 2 | PC 1 | Principal cell | all | CA2 | 760 | 1373 | 0.47 | 0.34 | 0.22 | 3.36e-60 | 1.13e-55 |
110 | 2 | PC 1 | Principal cell | all | CTSH | 1512 | 2535 | 0.47 | 0.26 | 0.17 | 3.26e-42 | 1.1e-37 |
110 | 2 | PC 1 | Principal cell | all | MUC1 | 4582 | 7508 | 0.46 | 0.49 | 0.35 | 8.46e-75 | 2.85e-70 |
110 | 2 | PC 1 | Principal cell | all | CDK2AP2 | 10263 | 30833 | 0.45 | 0.25 | 0.18 | 2.82e-26 | 9.5e-22 |
110 | 2 | PC 1 | Principal cell | all | GLS | 2744 | 4331 | 0.43 | 0.4 | 0.32 | 6.05e-42 | 2.04e-37 |
110 | 2 | PC 1 | Principal cell | all | CHCHD10 | 400916 | 15559 | 0.43 | 0.45 | 0.36 | 1.23e-48 | 4.16e-44 |
110 | 2 | PC 1 | Principal cell | all | EPCAM | 4072 | 11529 | 0.42 | 0.41 | 0.34 | 3.91e-41 | 1.32e-36 |
110 | 2 | PC 1 | Principal cell | all | NDRG1 | 10397 | 7679 | 0.42 | 0.31 | 0.26 | 1.16e-19 | 3.9e-15 |
110 | 2 | PC 1 | Principal cell | all | SCIN | 85477 | 21695 | 0.4 | 0.33 | 0.24 | 1.86e-36 | 6.27e-32 |
110 | 2 | PC 1 | Principal cell | all | IER3 | 8870 | 5392 | 0.4 | 0.38 | 0.3 | 1.33e-32 | 4.47e-28 |
110 | 2 | PC 1 | Principal cell | all | PKM | 5315 | 9021 | 0.4 | 0.43 | 0.37 | 4.81e-33 | 1.62e-28 |
110 | 2 | PC 1 | Principal cell | all | FOSL2 | 2355 | 3798 | 0.4 | 0.35 | 0.29 | 2.55e-25 | 8.61e-21 |
110 | 2 | PC 1 | Principal cell | all | RASD1 | 51655 | 15828 | 0.4 | 0.32 | 0.23 | 3.38e-35 | 1.14e-30 |
110 | 2 | PC 1 | Principal cell | all | PTP4A2 | 8073 | 9635 | 0.39 | 0.31 | 0.27 | 2.7e-18 | 9.1e-14 |
110 | 2 | PC 1 | Principal cell | all | COX7B | 1349 | 2291 | 0.39 | 0.68 | 0.6 | 1.05e-69 | 3.54e-65 |
110 | 2 | PC 1 | Principal cell | all | ASAH1 | 427 | 735 | 0.39 | 0.34 | 0.28 | 8.92e-26 | 3e-21 |
110 | 2 | PC 1 | Principal cell | all | MECOM | 2122 | 3498 | 0.38 | 0.29 | 0.22 | 1.03e-25 | 3.48e-21 |
110 | 2 | PC 1 | Principal cell | all | CD24 | 100133941 | 1645 | 0.37 | 0.77 | 0.64 | 3.18e-101 | 1.07e-96 |
110 | 2 | PC 1 | Principal cell | all | ENO1 | 2023 | 3350 | 0.36 | 0.43 | 0.39 | 1.13e-24 | 3.82e-20 |
110 | 2 | PC 1 | Principal cell | all | GSTP1 | 2950 | 4638 | 0.36 | 0.61 | 0.57 | 2.96e-44 | 9.96e-40 |
110 | 2 | PC 1 | Principal cell | all | CYCS | 54205 | 19986 | 0.35 | 0.4 | 0.36 | 1.08e-20 | 3.65e-16 |
110 | 2 | PC 1 | Principal cell | all | RALBP1 | 10928 | 9841 | 0.35 | 0.32 | 0.27 | 1.77e-16 | 5.95e-12 |
110 | 2 | PC 1 | Principal cell | all | TCEAL9 | 51186 | 30084 | 0.34 | 0.52 | 0.46 | 2.04e-34 | 6.89e-30 |
110 | 2 | PC 1 | Principal cell | all | UQCR10 | 29796 | 30863 | 0.34 | 0.55 | 0.51 | 1.09e-35 | 3.68e-31 |
110 | 2 | PC 1 | Principal cell | all | TPM4 | 7171 | 12013 | 0.34 | 0.26 | 0.19 | 2.15e-24 | 7.25e-20 |
110 | 2 | PC 1 | Principal cell | all | CAMK2N1 | 55450 | 24190 | 0.34 | 0.39 | 0.31 | 7.43e-28 | 2.5e-23 |
110 | 2 | PC 1 | Principal cell | all | ATP5MC1 | 516 | 841 | 0.33 | 0.38 | 0.35 | 5.15e-14 | 1.74e-09 |
110 | 2 | PC 1 | Principal cell | all | S100A11 | 6282 | 10488 | 0.33 | 0.63 | 0.56 | 2.18e-48 | 7.33e-44 |
110 | 2 | PC 1 | Principal cell | all | NDUFA4 | 4697 | 7687 | 0.33 | 0.77 | 0.71 | 2.88e-77 | 9.72e-73 |
110 | 2 | PC 1 | Principal cell | all | GSTM3 | 2947 | 4635 | 0.33 | 0.27 | 0.21 | 2.11e-20 | 7.1e-16 |
110 | 2 | PC 1 | Principal cell | all | HACD3 | 51495 | 24175 | 0.33 | 0.27 | 0.23 | 2.55e-12 | 8.58e-08 |
110 | 2 | PC 1 | Principal cell | all | NFAT5 | 10725 | 7774 | 0.32 | 0.26 | 0.23 | 1.54e-09 | 5.21e-05 |
110 | 2 | PC 1 | Principal cell | all | MMP24OS | 101410538 | 44421 | 0.31 | 0.26 | 0.23 | 1.98e-08 | 0.000666409071667 |
110 | 2 | PC 1 | Principal cell | all | GDF15 | 9518 | 30142 | 0.31 | 0.38 | 0.27 | 1.01e-38 | 3.41e-34 |
110 | 2 | PC 1 | Principal cell | all | COX6B1 | 1340 | 2280 | 0.3 | 0.65 | 0.61 | 2.14e-41 | 7.2e-37 |
110 | 2 | PC 1 | Principal cell | all | UQCRH | 7388 | 12590 | 0.3 | 0.58 | 0.54 | 7.43e-36 | 2.5e-31 |
110 | 2 | PC 1 | Principal cell | all | NEAT1 | 283131 | 30815 | 0.3 | 0.94 | 0.89 | 3.48e-105 | 1.17e-100 |
110 | 2 | PC 1 | Principal cell | all | ATP6V1F | 9296 | 16832 | 0.29 | 0.36 | 0.35 | 5.61e-10 | 1.89e-05 |
110 | 2 | PC 1 | Principal cell | all | DAZAP2 | 9802 | 2684 | 0.29 | 0.41 | 0.39 | 8.61e-13 | 2.9e-08 |
110 | 2 | PC 1 | Principal cell | all | ARL6IP1 | 23204 | 697 | 0.29 | 0.41 | 0.39 | 5.06e-12 | 1.71e-07 |
110 | 2 | PC 1 | Principal cell | all | MRPL33 | 9553 | 14487 | 0.28 | 0.52 | 0.49 | 8.96e-24 | 3.02e-19 |
110 | 2 | PC 1 | Principal cell | all | ATP5MD | 84833 | 30889 | 0.28 | 0.65 | 0.6 | 4.51e-39 | 1.52e-34 |
110 | 2 | PC 1 | Principal cell | all | UQCRQ | 27089 | 29594 | 0.28 | 0.68 | 0.64 | 1.8e-46 | 6.05e-42 |
110 | 2 | PC 1 | Principal cell | all | NDUFB1 | 4707 | 7695 | 0.28 | 0.59 | 0.57 | 4.77e-26 | 1.61e-21 |
110 | 2 | PC 1 | Principal cell | all | ATP5ME | 521 | 846 | 0.27 | 0.79 | 0.76 | 3.34e-54 | 1.12e-49 |
110 | 2 | PC 1 | Principal cell | all | MICOS10 | 440574 | 32068 | 0.27 | 0.48 | 0.46 | 2.16e-17 | 7.27e-13 |
110 | 2 | PC 1 | Principal cell | all | FAM107B | 83641 | 23726 | 0.26 | 0.28 | 0.25 | 1.92e-07 | 0.006485285319985 |
110 | 2 | PC 1 | Principal cell | all | C12orf75 | 387882 | 35164 | 0.26 | 0.35 | 0.31 | 4.53e-12 | 1.53e-07 |
110 | 2 | PC 1 | Principal cell | all | GABARAPL1 | 23710 | 4068 | 0.26 | 0.26 | 0.23 | 2.59e-07 | 0.008728992005182 |
110 | 2 | PC 1 | Principal cell | all | RPS26 | 6231 | 10414 | 0.26 | 0.75 | 0.69 | 5.7e-47 | 1.92e-42 |
110 | 2 | PC 1 | Principal cell | all | NDUFA1 | 4694 | 7683 | 0.26 | 0.64 | 0.61 | 2.06e-29 | 6.93e-25 |
110 | 2 | PC 1 | Principal cell | all | SOD2 | 6648 | 11180 | 0.25 | 0.34 | 0.32 | 8.13e-09 | 0.000273997119047 |
110 | 2 | PC 1 | Principal cell | all | VDAC1 | 7416 | 12669 | 0.25 | 0.33 | 0.32 | 7.49e-06 | 0.25 |