Marker Genes
Dataset: Novel Human Kidney Cell Subsets Identified by Mux-Seq
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Adult
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 9000000002
- subset name: all
- total genes: 33694
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.biorxiv.org/content/10.1101/2020.03.02.973925v1.full
Rows:17
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
110 | 15 | TAL 4 (high MT) | all | ND2 | 4536 | 7456 | 1.07 | 1 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | ND3 | 4537 | 7458 | 0.97 | 1 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | UMOD | 7369 | 12559 | 0.82 | 0.68 | 0.21 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | MTRNR2L8 | 100463486 | 37165 | 0.79 | 0.82 | 0.59 | 3.74e-212 | 1.26e-207 | |
110 | 15 | TAL 4 (high MT) | all | CYTB | 4519 | 7427 | 0.75 | 0.99 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | ATP6 | 4508 | 7414 | 0.74 | 0.99 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | SLC12A1 | 6557 | 10910 | 0.74 | 0.58 | 0.21 | 1.89e-248 | 6.35e-244 | |
110 | 15 | TAL 4 (high MT) | all | COX3 | 4514 | 7422 | 0.7 | 1 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | COX1 | 4512 | 7419 | 0.68 | 1 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | ND6 | 4541 | 7462 | 0.64 | 0.77 | 0.61 | 2.28e-131 | 7.69e-127 | |
110 | 15 | TAL 4 (high MT) | all | ND4 | 4538 | 7459 | 0.6 | 1 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | MTCO2P12 | 107075310 | 52028 | 0.58 | 1 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | ND5 | 4540 | 7461 | 0.54 | 0.99 | 0.99 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | ND1 | 4535 | 7455 | 0.52 | 0.99 | 1 | 0 | 0 | |
110 | 15 | TAL 4 (high MT) | all | ND4L | 4539 | 7460 | 0.51 | 0.99 | 0.99 | 4.86e-266 | 1.64e-261 | |
110 | 15 | TAL 4 (high MT) | all | CTNNB1 | 1499 | 2514 | 0.43 | 0.4 | 0.33 | 7.31e-22 | 2.46e-17 | |
110 | 15 | TAL 4 (high MT) | all | C1orf56 | 54964 | 26045 | 0.4 | 0.27 | 0.19 | 2.04e-20 | 6.87e-16 |