Marker Genes
Dataset: Novel Human Kidney Cell Subsets Identified by Mux-Seq
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Adult
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 9000000002
- subset name: all
- total genes: 33694
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.biorxiv.org/content/10.1101/2020.03.02.973925v1.full
Rows:73
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
110 | 1 | Endo 1 | all | IGFBP5 | 3488 | 5474 | 2.37 | 0.83 | 0.25 | 0 | 0 | |
110 | 1 | Endo 1 | all | EMCN | 51705 | 16041 | 2.29 | 0.59 | 0.06 | 0 | 0 | |
110 | 1 | Endo 1 | all | PLAT | 5327 | 9051 | 1.82 | 0.45 | 0.05 | 0 | 0 | |
110 | 1 | Endo 1 | all | TGFBR2 | 7048 | 11773 | 1.65 | 0.48 | 0.14 | 0 | 0 | |
110 | 1 | Endo 1 | all | IFI27 | 3429 | 5397 | 1.64 | 0.6 | 0.14 | 0 | 0 | |
110 | 1 | Endo 1 | all | SLC9A3R2 | 9351 | 11076 | 1.61 | 0.46 | 0.08 | 0 | 0 | |
110 | 1 | Endo 1 | all | PLPP1 | 8611 | 9228 | 1.46 | 0.42 | 0.1 | 0 | 0 | |
110 | 1 | Endo 1 | all | CRHBP | 1393 | 2356 | 1.41 | 0.3 | 0.02 | 0 | 0 | |
110 | 1 | Endo 1 | all | PLPP3 | 8613 | 9229 | 1.39 | 0.38 | 0.12 | 0 | 0 | |
110 | 1 | Endo 1 | all | EPAS1 | 2034 | 3374 | 1.38 | 0.44 | 0.12 | 0 | 0 | |
110 | 1 | Endo 1 | all | TIMP3 | 7078 | 11822 | 1.34 | 0.62 | 0.28 | 0 | 0 | |
110 | 1 | Endo 1 | all | RNASE1 | 6035 | 10044 | 1.33 | 0.4 | 0.07 | 0 | 0 | |
110 | 1 | Endo 1 | all | FLT1 | 2321 | 3763 | 1.31 | 0.3 | 0.03 | 0 | 0 | |
110 | 1 | Endo 1 | all | GNG11 | 2791 | 4403 | 1.18 | 0.44 | 0.19 | 0 | 1.9e-303 | |
110 | 1 | Endo 1 | all | EGFL7 | 51162 | 20594 | 1.17 | 0.32 | 0.07 | 0 | 0 | |
110 | 1 | Endo 1 | all | PTPRB | 5787 | 9665 | 1.16 | 0.28 | 0.03 | 0 | 0 | |
110 | 1 | Endo 1 | all | SPARC | 6678 | 11219 | 1.14 | 0.44 | 0.17 | 0 | 0 | |
110 | 1 | Endo 1 | all | PCAT19 | 100505495 | 49593 | 1.13 | 0.27 | 0.04 | 0 | 0 | |
110 | 1 | Endo 1 | all | MGP | 4256 | 7060 | 1.13 | 0.49 | 0.16 | 0 | 0 | |
110 | 1 | Endo 1 | all | RAMP2 | 10266 | 9844 | 1.12 | 0.3 | 0.05 | 0 | 0 | |
110 | 1 | Endo 1 | all | LDB2 | 9079 | 6533 | 1.11 | 0.26 | 0.03 | 0 | 0 | |
110 | 1 | Endo 1 | all | VAMP5 | 10791 | 12646 | 1.06 | 0.35 | 0.12 | 1.45e-293 | 4.89e-289 | |
110 | 1 | Endo 1 | all | ENG | 2022 | 3349 | 1.04 | 0.28 | 0.05 | 0 | 0 | |
110 | 1 | Endo 1 | all | A2M | 2 | 7 | 0.98 | 0.29 | 0.09 | 1.66e-262 | 5.6e-258 | |
110 | 1 | Endo 1 | all | TCF4 | 6925 | 11634 | 0.97 | 0.27 | 0.08 | 9.78e-242 | 3.3e-237 | |
110 | 1 | Endo 1 | all | PECAM1 | 5175 | 8823 | 0.96 | 0.25 | 0.05 | 0 | 0 | |
110 | 1 | Endo 1 | all | IFITM3 | 10410 | 5414 | 0.96 | 0.64 | 0.44 | 6.52e-258 | 2.2e-253 | |
110 | 1 | Endo 1 | all | ADGRF5 | 221395 | 19030 | 0.92 | 0.37 | 0.13 | 1.32e-276 | 4.44e-272 | |
110 | 1 | Endo 1 | all | CAVIN2 | 8436 | 10690 | 0.92 | 0.25 | 0.05 | 0 | 0 | |
110 | 1 | Endo 1 | all | HLA-E | 3133 | 4962 | 0.89 | 0.46 | 0.33 | 3.41e-119 | 1.15e-114 | |
110 | 1 | Endo 1 | all | AQP1 | 358 | 633 | 0.87 | 0.27 | 0.11 | 1.36e-147 | 4.57e-143 | |
110 | 1 | Endo 1 | all | PBX1 | 5087 | 8632 | 0.86 | 0.31 | 0.18 | 3.95e-93 | 1.33e-88 | |
110 | 1 | Endo 1 | all | CD74 | 972 | 1697 | 0.86 | 0.67 | 0.43 | 1.07e-292 | 3.61e-288 | |
110 | 1 | Endo 1 | all | BEX5 | 340542 | 27990 | 0.85 | 0.32 | 0.19 | 8.47e-90 | 2.85e-85 | |
110 | 1 | Endo 1 | all | TM4SF1 | 4071 | 11853 | 0.83 | 0.31 | 0.12 | 1.49e-201 | 5.02e-197 | |
110 | 1 | Endo 1 | all | SEC14L1 | 6397 | 10698 | 0.82 | 0.31 | 0.17 | 1.13e-105 | 3.82e-101 | |
110 | 1 | Endo 1 | all | SPTBN1 | 6711 | 11275 | 0.82 | 0.42 | 0.29 | 1.16e-100 | 3.9e-96 | |
110 | 1 | Endo 1 | all | ETS1 | 2113 | 3488 | 0.8 | 0.25 | 0.1 | 2.8e-139 | 9.43e-135 | |
110 | 1 | Endo 1 | all | LGALS1 | 3956 | 6561 | 0.79 | 0.44 | 0.3 | 7.58e-95 | 2.56e-90 | |
110 | 1 | Endo 1 | all | SPRY1 | 10252 | 11269 | 0.79 | 0.3 | 0.15 | 9.84e-122 | 3.31e-117 | |
110 | 1 | Endo 1 | all | ETS2 | 2114 | 3489 | 0.76 | 0.29 | 0.17 | 2.48e-80 | 8.34e-76 | |
110 | 1 | Endo 1 | all | IL6ST | 3572 | 6021 | 0.74 | 0.35 | 0.24 | 5.34e-75 | 1.8e-70 | |
110 | 1 | Endo 1 | all | KLF2 | 10365 | 6347 | 0.73 | 0.32 | 0.17 | 6.14e-111 | 2.07e-106 | |
110 | 1 | Endo 1 | all | B2M | 567 | 914 | 0.73 | 0.95 | 0.88 | 0 | 0 | |
110 | 1 | Endo 1 | all | SYNE1 | 23345 | 17089 | 0.73 | 0.26 | 0.15 | 2.11e-63 | 7.1e-59 | |
110 | 1 | Endo 1 | all | BST2 | 684 | 1119 | 0.73 | 0.26 | 0.14 | 1.48e-84 | 4.98e-80 | |
110 | 1 | Endo 1 | all | DPYSL2 | 1808 | 3014 | 0.71 | 0.26 | 0.14 | 1.65e-79 | 5.56e-75 | |
110 | 1 | Endo 1 | all | HLA-DRB1 | 3123 | 4948 | 0.63 | 0.38 | 0.23 | 3.91e-107 | 1.32e-102 | |
110 | 1 | Endo 1 | all | IFITM2 | 10581 | 5413 | 0.62 | 0.38 | 0.3 | 3.2e-51 | 1.08e-46 | |
110 | 1 | Endo 1 | all | HLA-B | 3106 | 4932 | 0.61 | 0.56 | 0.5 | 2.4e-79 | 8.07e-75 | |
110 | 1 | Endo 1 | all | HLA-C | 3107 | 4933 | 0.6 | 0.5 | 0.45 | 2.75e-58 | 9.27e-54 | |
110 | 1 | Endo 1 | all | ID1 | 3397 | 5360 | 0.57 | 0.27 | 0.18 | 7.53e-45 | 2.54e-40 | |
110 | 1 | Endo 1 | all | PODXL | 5420 | 9171 | 0.56 | 0.25 | 0.07 | 4.43e-243 | 1.49e-238 | |
110 | 1 | Endo 1 | all | SGK1 | 6446 | 10810 | 0.52 | 0.31 | 0.24 | 7.88e-25 | 2.66e-20 | |
110 | 1 | Endo 1 | all | ITGB1 | 3688 | 6153 | 0.51 | 0.4 | 0.38 | 8.8e-23 | 2.96e-18 | |
110 | 1 | Endo 1 | all | CALD1 | 800 | 1441 | 0.5 | 0.31 | 0.24 | 1.26e-29 | 4.24e-25 | |
110 | 1 | Endo 1 | all | RBMS1 | 5937 | 9907 | 0.47 | 0.25 | 0.2 | 1.02e-16 | 3.42e-12 | |
110 | 1 | Endo 1 | all | FKBP1A | 2280 | 3711 | 0.47 | 0.34 | 0.32 | 2.81e-16 | 9.46e-12 | |
110 | 1 | Endo 1 | all | CRIP2 | 1397 | 2361 | 0.46 | 0.32 | 0.27 | 1.01e-18 | 3.41e-14 | |
110 | 1 | Endo 1 | all | CNN3 | 1266 | 2157 | 0.43 | 0.38 | 0.36 | 7.51e-15 | 2.53e-10 | |
110 | 1 | Endo 1 | all | MSN | 4478 | 7373 | 0.42 | 0.26 | 0.23 | 6.21e-10 | 2.09e-05 | |
110 | 1 | Endo 1 | all | ATP8 | 4509 | 7415 | 0.4 | 0.52 | 0.52 | 3.88e-21 | 1.31e-16 | |
110 | 1 | Endo 1 | all | APP | 351 | 620 | 0.39 | 0.53 | 0.53 | 2.46e-27 | 8.3e-23 | |
110 | 1 | Endo 1 | all | CALM1 | 801 | 1442 | 0.39 | 0.42 | 0.45 | 9.81e-09 | 0.000330563870285 | |
110 | 1 | Endo 1 | all | HLA-A | 3105 | 4931 | 0.39 | 0.47 | 0.5 | 1.14e-11 | 3.85e-07 | |
110 | 1 | Endo 1 | all | ARGLU1 | 55082 | 25482 | 0.38 | 0.36 | 0.37 | 1.42e-05 | 0.48 | |
110 | 1 | Endo 1 | all | POMP | 51371 | 20330 | 0.35 | 0.39 | 0.44 | 0.000746333053757 | 1 | |
110 | 1 | Endo 1 | all | MTRNR2L12 | 100463498 | 37169 | 0.34 | 0.43 | 0.45 | 4.33e-05 | 1 | |
110 | 1 | Endo 1 | all | XIST | 7503 | 12810 | 0.34 | 0.27 | 0.24 | 6.33e-11 | 2.13e-06 | |
110 | 1 | Endo 1 | all | HLA-DPA1 | 3113 | 4938 | 0.3 | 0.25 | 0.15 | 1.62e-48 | 5.47e-44 | |
110 | 1 | Endo 1 | all | HLA-DRA | 3122 | 4947 | 0.29 | 0.43 | 0.29 | 1.9e-82 | 6.4e-78 | |
110 | 1 | Endo 1 | all | TMSB10 | 9168 | 11879 | 0.27 | 0.85 | 0.79 | 8.78e-91 | 2.96e-86 | |
110 | 1 | Endo 1 | all | COX7A1 | 1346 | 2287 | 0.25 | 0.27 | 0.25 | 8.27e-07 | 0.02 |