Marker Genes
Dataset: Novel Human Kidney Cell Subsets Identified by Mux-Seq
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Adult
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 9000000002
- subset name: all
- total genes: 33694
- clustering: Seurat
- pseudotime: Monocle 2
- link: https://www.biorxiv.org/content/10.1101/2020.03.02.973925v1.full
Rows:87
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
110 | 0 | TAL 1 | Thick ascending limb | all | UMOD | 7369 | 12559 | 2.69 | 0.98 | 0.17 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | SLC12A1 | 6557 | 10910 | 2.35 | 0.94 | 0.17 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | KNG1 | 3827 | 6383 | 1.45 | 0.65 | 0.11 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | EGF | 1950 | 3229 | 1.45 | 0.46 | 0.04 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | CLDN16 | 10686 | 2037 | 1.36 | 0.41 | 0.07 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | HSPA2 | 3306 | 5235 | 1.1 | 0.4 | 0.12 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | CYFIP2 | 26999 | 13760 | 1.08 | 0.43 | 0.14 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | SFRP1 | 6422 | 10776 | 1.07 | 0.39 | 0.1 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | NUDT4 | 11163 | 8051 | 1.03 | 0.56 | 0.26 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | ZFAND5 | 7763 | 13008 | 1.02 | 0.64 | 0.36 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | ATP1B1 | 481 | 804 | 0.97 | 0.97 | 0.72 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | NTRK2 | 4915 | 8032 | 0.97 | 0.32 | 0.08 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | MTURN | 222166 | 25457 | 0.95 | 0.4 | 0.15 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | CLCN5 | 1184 | 2023 | 0.95 | 0.34 | 0.1 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | RHOBTB3 | 22836 | 18757 | 0.91 | 0.44 | 0.2 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | PDK4 | 5166 | 8812 | 0.89 | 0.59 | 0.33 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | SLC5A3 | 6526 | 11038 | 0.89 | 0.46 | 0.23 | 2.07e-272 | 6.99e-268 |
110 | 0 | TAL 1 | Thick ascending limb | all | SLC16A12 | 387700 | 23094 | 0.86 | 0.3 | 0.08 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | PDE1A | 5136 | 8774 | 0.84 | 0.32 | 0.12 | 8.49e-268 | 2.86e-263 |
110 | 0 | TAL 1 | Thick ascending limb | all | CLDN10 | 9071 | 2033 | 0.82 | 0.38 | 0.14 | 1.12e-307 | 3.78e-303 |
110 | 0 | TAL 1 | Thick ascending limb | all | CGNL1 | 84952 | 25931 | 0.81 | 0.34 | 0.14 | 6.77e-258 | 2.28e-253 |
110 | 0 | TAL 1 | Thick ascending limb | all | MRPS6 | 64968 | 14051 | 0.75 | 0.42 | 0.24 | 2.86e-180 | 9.64e-176 |
110 | 0 | TAL 1 | Thick ascending limb | all | EFHD1 | 80303 | 29556 | 0.74 | 0.4 | 0.21 | 2.89e-187 | 9.75e-183 |
110 | 0 | TAL 1 | Thick ascending limb | all | PTGER3 | 5733 | 9595 | 0.71 | 0.37 | 0.16 | 1.34e-228 | 4.5e-224 |
110 | 0 | TAL 1 | Thick ascending limb | all | ATP1A1 | 476 | 799 | 0.69 | 0.74 | 0.48 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | METTL7A | 25840 | 24550 | 0.65 | 0.32 | 0.17 | 2.39e-132 | 8.06e-128 |
110 | 0 | TAL 1 | Thick ascending limb | all | SLC16A7 | 9194 | 10928 | 0.63 | 0.25 | 0.1 | 1.32e-159 | 4.46e-155 |
110 | 0 | TAL 1 | Thick ascending limb | all | CLCNKA | 1187 | 2026 | 0.61 | 0.3 | 0.14 | 4.09e-149 | 1.38e-144 |
110 | 0 | TAL 1 | Thick ascending limb | all | PLCG2 | 5336 | 9066 | 0.59 | 0.31 | 0.24 | 2.94e-38 | 9.92e-34 |
110 | 0 | TAL 1 | Thick ascending limb | all | USP53 | 54532 | 29255 | 0.58 | 0.33 | 0.21 | 4.86e-98 | 1.64e-93 |
110 | 0 | TAL 1 | Thick ascending limb | all | LMO7 | 4008 | 6646 | 0.57 | 0.27 | 0.16 | 1.21e-88 | 4.06e-84 |
110 | 0 | TAL 1 | Thick ascending limb | all | TRIM2 | 23321 | 15974 | 0.56 | 0.26 | 0.15 | 1.99e-91 | 6.71e-87 |
110 | 0 | TAL 1 | Thick ascending limb | all | HIBADH | 11112 | 4907 | 0.55 | 0.25 | 0.14 | 8.94e-78 | 3.01e-73 |
110 | 0 | TAL 1 | Thick ascending limb | all | MTRNR2L8 | 100463486 | 37165 | 0.53 | 0.76 | 0.58 | 2.82e-219 | 9.51e-215 |
110 | 0 | TAL 1 | Thick ascending limb | all | IRF2BPL | 64207 | 14282 | 0.53 | 0.3 | 0.2 | 4.21e-70 | 1.42e-65 |
110 | 0 | TAL 1 | Thick ascending limb | all | PEBP1 | 5037 | 8630 | 0.53 | 0.64 | 0.49 | 2.15e-160 | 7.26e-156 |
110 | 0 | TAL 1 | Thick ascending limb | all | TCIM | 56892 | 1357 | 0.52 | 0.34 | 0.2 | 4.43e-101 | 1.49e-96 |
110 | 0 | TAL 1 | Thick ascending limb | all | CKB | 1152 | 1991 | 0.52 | 0.4 | 0.27 | 5.64e-87 | 1.9e-82 |
110 | 0 | TAL 1 | Thick ascending limb | all | TSPAN8 | 7103 | 11855 | 0.52 | 0.25 | 0.1 | 3.62e-150 | 1.22e-145 |
110 | 0 | TAL 1 | Thick ascending limb | all | MPC1 | 51660 | 21606 | 0.52 | 0.34 | 0.24 | 6.26e-70 | 2.11e-65 |
110 | 0 | TAL 1 | Thick ascending limb | all | KCNJ1 | 3758 | 6255 | 0.51 | 0.28 | 0.16 | 1.14e-88 | 3.85e-84 |
110 | 0 | TAL 1 | Thick ascending limb | all | TMEM52B | 120939 | 26438 | 0.5 | 0.37 | 0.22 | 1.84e-90 | 6.2e-86 |
110 | 0 | TAL 1 | Thick ascending limb | all | SMS | 6611 | 11123 | 0.49 | 0.34 | 0.25 | 6e-56 | 2.02e-51 |
110 | 0 | TAL 1 | Thick ascending limb | all | AHCYL1 | 10768 | 344 | 0.48 | 0.32 | 0.23 | 1.99e-56 | 6.71e-52 |
110 | 0 | TAL 1 | Thick ascending limb | all | IVNS1ABP | 10625 | 16951 | 0.48 | 0.39 | 0.27 | 5e-75 | 1.68e-70 |
110 | 0 | TAL 1 | Thick ascending limb | all | PTH1R | 5745 | 9608 | 0.48 | 0.25 | 0.16 | 1.19e-44 | 4e-40 |
110 | 0 | TAL 1 | Thick ascending limb | all | PRDX3 | 10935 | 9354 | 0.47 | 0.37 | 0.29 | 3.09e-53 | 1.04e-48 |
110 | 0 | TAL 1 | Thick ascending limb | all | CD24 | 100133941 | 1645 | 0.46 | 0.84 | 0.63 | 3.31e-220 | 1.11e-215 |
110 | 0 | TAL 1 | Thick ascending limb | all | KCNJ16 | 3773 | 6262 | 0.46 | 0.49 | 0.36 | 1.74e-91 | 5.86e-87 |
110 | 0 | TAL 1 | Thick ascending limb | all | AK3 | 50808 | 17376 | 0.45 | 0.29 | 0.21 | 1.01e-43 | 3.39e-39 |
110 | 0 | TAL 1 | Thick ascending limb | all | ND2 | 4536 | 7456 | 0.45 | 1 | 1 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | KLF9 | 687 | 1123 | 0.44 | 0.27 | 0.19 | 2.31e-49 | 7.79e-45 |
110 | 0 | TAL 1 | Thick ascending limb | all | ALDH1A1 | 216 | 402 | 0.44 | 0.29 | 0.22 | 5.44e-40 | 1.83e-35 |
110 | 0 | TAL 1 | Thick ascending limb | all | UQCRB | 7381 | 12582 | 0.43 | 0.76 | 0.65 | 3.18e-137 | 1.07e-132 |
110 | 0 | TAL 1 | Thick ascending limb | all | LDHB | 3945 | 6541 | 0.43 | 0.6 | 0.47 | 4.82e-97 | 1.62e-92 |
110 | 0 | TAL 1 | Thick ascending limb | all | DEFB1 | 1672 | 2766 | 0.42 | 0.88 | 0.58 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | APP | 351 | 620 | 0.41 | 0.63 | 0.52 | 4.22e-99 | 1.42e-94 |
110 | 0 | TAL 1 | Thick ascending limb | all | WNK1 | 65125 | 14540 | 0.41 | 0.39 | 0.29 | 7.5e-57 | 2.53e-52 |
110 | 0 | TAL 1 | Thick ascending limb | all | ND6 | 4541 | 7462 | 0.4 | 0.73 | 0.61 | 2.05e-119 | 6.92e-115 |
110 | 0 | TAL 1 | Thick ascending limb | all | IRF2BP2 | 359948 | 21729 | 0.39 | 0.25 | 0.2 | 8.02e-24 | 2.7e-19 |
110 | 0 | TAL 1 | Thick ascending limb | all | AMFR | 267 | 463 | 0.39 | 0.31 | 0.23 | 7.3e-44 | 2.46e-39 |
110 | 0 | TAL 1 | Thick ascending limb | all | HIPK2 | 28996 | 14402 | 0.39 | 0.33 | 0.26 | 4.93e-42 | 1.66e-37 |
110 | 0 | TAL 1 | Thick ascending limb | all | FKBP5 | 2289 | 3721 | 0.38 | 0.25 | 0.17 | 2.36e-43 | 7.96e-39 |
110 | 0 | TAL 1 | Thick ascending limb | all | MSI2 | 124540 | 18585 | 0.37 | 0.36 | 0.29 | 4.61e-33 | 1.55e-28 |
110 | 0 | TAL 1 | Thick ascending limb | all | DDX17 | 10521 | 2740 | 0.36 | 0.57 | 0.5 | 2.54e-62 | 8.55e-58 |
110 | 0 | TAL 1 | Thick ascending limb | all | TOB1 | 10140 | 11979 | 0.35 | 0.29 | 0.24 | 1.07e-23 | 3.6e-19 |
110 | 0 | TAL 1 | Thick ascending limb | all | APLP2 | 334 | 598 | 0.35 | 0.54 | 0.47 | 1.9e-50 | 6.39e-46 |
110 | 0 | TAL 1 | Thick ascending limb | all | ND3 | 4537 | 7458 | 0.34 | 1 | 1 | 0 | 0 |
110 | 0 | TAL 1 | Thick ascending limb | all | MDM4 | 4194 | 6974 | 0.33 | 0.26 | 0.22 | 1.14e-19 | 3.84e-15 |
110 | 0 | TAL 1 | Thick ascending limb | all | COX7A1 | 1346 | 2287 | 0.33 | 0.33 | 0.24 | 2.13e-42 | 7.19e-38 |
110 | 0 | TAL 1 | Thick ascending limb | all | SCNN1A | 6337 | 10599 | 0.32 | 0.28 | 0.22 | 4.8e-26 | 1.62e-21 |
110 | 0 | TAL 1 | Thick ascending limb | all | PRR13 | 54458 | 24528 | 0.32 | 0.38 | 0.34 | 4.43e-21 | 1.49e-16 |
110 | 0 | TAL 1 | Thick ascending limb | all | OGA | 10724 | 7056 | 0.32 | 0.28 | 0.24 | 8.21e-19 | 2.76e-14 |
110 | 0 | TAL 1 | Thick ascending limb | all | ATP5F1A | 498 | 823 | 0.32 | 0.35 | 0.32 | 1.51e-17 | 5.08e-13 |
110 | 0 | TAL 1 | Thick ascending limb | all | UQCRH | 7388 | 12590 | 0.32 | 0.62 | 0.54 | 1.79e-58 | 6.02e-54 |
110 | 0 | TAL 1 | Thick ascending limb | all | CTNNB1 | 1499 | 2514 | 0.31 | 0.37 | 0.33 | 2.02e-18 | 6.79e-14 |
110 | 0 | TAL 1 | Thick ascending limb | all | CA12 | 771 | 1371 | 0.3 | 0.41 | 0.31 | 1.1e-47 | 3.72e-43 |
110 | 0 | TAL 1 | Thick ascending limb | all | ARID5B | 84159 | 17362 | 0.3 | 0.26 | 0.24 | 1.19e-08 | 0.000402090899252 |
110 | 0 | TAL 1 | Thick ascending limb | all | ATP5MC3 | 518 | 843 | 0.28 | 0.5 | 0.44 | 3.35e-33 | 1.13e-28 |
110 | 0 | TAL 1 | Thick ascending limb | all | BEX3 | 27018 | 13388 | 0.28 | 0.61 | 0.53 | 1.07e-50 | 3.61e-46 |
110 | 0 | TAL 1 | Thick ascending limb | all | CANX | 821 | 1473 | 0.28 | 0.43 | 0.4 | 5.6e-20 | 1.89e-15 |
110 | 0 | TAL 1 | Thick ascending limb | all | COX3 | 4514 | 7422 | 0.27 | 1 | 1 | 4.8e-273 | 1.62e-268 |
110 | 0 | TAL 1 | Thick ascending limb | all | ATP5PF | 522 | 847 | 0.27 | 0.58 | 0.52 | 1.6e-36 | 5.4e-32 |
110 | 0 | TAL 1 | Thick ascending limb | all | FXYD2 | 486 | 4026 | 0.26 | 0.76 | 0.59 | 1.23e-77 | 4.16e-73 |
110 | 0 | TAL 1 | Thick ascending limb | all | SLC25A5 | 292 | 10991 | 0.26 | 0.36 | 0.33 | 7.19e-14 | 2.42e-09 |
110 | 0 | TAL 1 | Thick ascending limb | all | ATP5PB | 515 | 840 | 0.25 | 0.28 | 0.27 | 2.32e-06 | 0.07 |
110 | 0 | TAL 1 | Thick ascending limb | all | TFCP2L1 | 29842 | 17925 | 0.25 | 0.29 | 0.26 | 8.49e-11 | 2.86e-06 |