Marker Genes

Dataset: Single-cell transcriptomic analysis of Alzheimer's disease

  • tissue: Prefrontal cortex
  • ontology: Brain
  • genotype: -
  • stage: Adult
  • treatment condition: WT, Alzheimers
  • cell/nucleus: Nuclei
  • pmid: 31042697
  • subset name: all
  • total genes: 17926
  • clustering: Fishers exact test
  • pseudotime: None
  • link:

Rows:7
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
104 39 Opc0 Oligodendrocyte progenitor cells all GRIA4 2893 4574 0.56 6.2e-18
104 39 Opc0 Oligodendrocyte progenitor cells all SEMA3E 9723 10727 0.76 3.23e-07
104 39 Opc0 Oligodendrocyte progenitor cells all HDAC9 9734 14065 0.68 9.58e-07
104 39 Opc0 Oligodendrocyte progenitor cells all RB1CC1 9821 15574 0.72 4.76e-05
104 39 Opc0 Oligodendrocyte progenitor cells all RALYL 138046 27036 0.72 0.000203300301641
104 39 Opc0 Oligodendrocyte progenitor cells all MYT1L 23040 7623 0.5 0.000312987168452
104 39 Opc0 Oligodendrocyte progenitor cells all USP47 55031 20076 0.53 0.000925462935082