Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 9 MEGA all PPBP 5473 9240 4.24 0.3 0.01 6.3385182439536E-60 1.5110393641761E-55
101 9 MEGA all PF4 5196 8861 2.82 0.3 0.004 5.4897952962127E-168 1.3087123006641E-163
101 9 MEGA all MPIG6B 80739 13937 2.58 0.33 0.06 1.5912391586502E-12 3.7933550303062E-8
101 9 MEGA all LAT 27040 18874 2.41 0.41 0.13 1.7039076520351E-8 0.000406194545169
101 9 MEGA all RGS18 64407 14261 2.37 0.5 0.29 6.8825557114887E-5 1
101 9 MEGA all RAP1B 5908 9857 2.08 0.66 0.61 0.00720166022948 1
101 9 MEGA all HIST1H4C 8364 4787 1.99 0.63 0.37 6.1705022612105E-7 0.01
101 9 MEGA all GP9 2815 4444 1.96 0.33 0.01 9.1637463492664E-66 2.1845454922016E-61
101 9 MEGA all NT5C3A 51251 17820 1.93 0.44 0.31 0.002031373002701 1
101 9 MEGA all CAVIN2 8436 10690 1.92 0.36 0.06 1.4941700640434E-13 3.5619520156731E-9
101 9 MEGA all TUBB1 81027 16257 1.89 0.33 0.006 6.0352608598652E-138 1.4387458363833E-133
101 9 MEGA all THBS1 7057 11785 1.87 0.33 0.02 1.2265080730255E-34 2.9238725952854E-30
101 9 MEGA all CXCL3 2921 4604 1.84 0.3 0.05 2.6503348349372E-12 6.3181332130067E-8
101 9 MEGA all LGALSL 29094 25012 1.84 0.27 0.007 6.5860649759426E-84 1.570052029615E-79
101 9 MEGA all CXCL2 2920 4603 1.84 0.38 0.1 2.5780759375666E-9 6.1458752275649E-5
101 9 MEGA all ITGA2B 3674 6138 1.74 0.38 0.03 2.7110492326915E-31 6.4628702658132E-27
101 9 MEGA all LTBP1 4052 6714 1.73 0.5 0.03 3.9845354643978E-57 9.4987340935779E-53
101 9 MEGA all PTGS1 5742 9604 1.71 0.38 0.09 2.9768366309032E-11 7.09648084441E-7
101 9 MEGA all PLEK 5341 9070 1.63 0.77 0.49 9.3983026106945E-8 0.002240461359363
101 9 MEGA all RAMP3 10268 9845 1.6 0.22 0.001 1.4909410790166E-254 3.5542544382676E-250
101 9 MEGA all ESAM 90952 17474 1.57 0.25 0.02 4.0199204078071E-22 9.5830882601714E-18
101 9 MEGA all SEPTIN5 5413 9164 1.55 0.33 0.02 1.4674585448355E-28 3.4982744250335E-24
101 9 MEGA all RP11-678G14.3 NULL 1.52 0.3 0.04 4.5489812265454E-14 1.0844316345962E-9
101 9 MEGA all STMN1 3925 6510 1.46 0.69 0.51 2.0450167909453E-6 0.04
101 9 MEGA all LIMS1 3987 6616 1.45 0.72 0.38 2.3771169758073E-9 5.6668091586271E-5
101 9 MEGA all SNCA 6622 11138 1.43 0.52 0.24 1.6510394979075E-6 0.03
101 9 MEGA all PDZK1IP1 10158 16887 1.43 0.27 0.02 3.4600513790433E-28 8.2484164825014E-24
101 9 MEGA all C2orf88 84281 28191 1.42 0.33 0.02 2.2459868855608E-38 5.3542081364885E-34
101 9 MEGA all F13A1 2162 3531 1.38 0.38 0.15 1.6409160332805E-5 0.39
101 9 MEGA all PRTN3 5657 9495 1.37 0.13 0.05 0.02 1
101 9 MEGA all GP1BA 2811 4439 1.34 0.3 0.01 6.8810561389547E-74 1.6403749729654E-69
101 9 MEGA all TPM1 7168 12010 1.32 0.33 0.07 7.7155663358515E-10 1.8393138588036E-5
101 9 MEGA all RAB27B 5874 9767 1.32 0.41 0.11 5.6058194008428E-10 1.3363712869669E-5
101 9 MEGA all HEXIM1 10614 24953 1.31 0.33 0.13 3.7627903613029E-5 0.89
101 9 MEGA all STOM 2040 3383 1.31 0.47 0.28 0.000365673000425 1
101 9 MEGA all CMTM5 116173 19176 1.3 0.22 0.002 1.7489700337419E-161 4.1693696634373E-157
101 9 MEGA all CDKN2D 1032 1790 1.28 0.33 0.12 2.9510733140259E-5 0.7
101 9 MEGA all PCLAF 9768 28961 1.28 0.52 0.17 3.5958541216488E-10 8.5721566405985E-6
101 9 MEGA all PPIF 10105 9259 1.28 0.58 0.17 8.1544561791508E-14 1.9439408085478E-9
101 9 MEGA all MMRN1 22915 7178 1.28 0.27 0.09 2.5497486894267E-5 0.6
101 9 MEGA all GFI1B 8328 4238 1.27 0.33 0.06 4.575821662544E-12 1.0908301261339E-7
101 9 MEGA all DMTN 2039 3382 1.23 0.33 0.06 1.3056323370688E-12 3.1124969283384E-8
101 9 MEGA all RTN4 57142 14085 1.21 0.75 0.62 0.005658131648931 1
101 9 MEGA all CD9 928 1709 1.2 0.25 0.15 0.02 1
101 9 MEGA all TUBA1C 84790 20768 1.18 0.77 0.35 2.8051977361257E-13 6.6873108831501E-9
101 9 MEGA all RGCC 28984 20369 1.18 0.44 0.23 0.000255779945911 1
101 9 MEGA all RP6-159A1.4 NULL 1.17 0.44 0.36 0.02 1
101 9 MEGA all SERPINE1 5054 8583 1.17 0.3 0.01 1.6797354824185E-38 4.0043214165375E-34
101 9 MEGA all HBD 3045 4829 1.17 0.25 0.08 0.000277407237333 1
101 9 MEGA all NFE2 4778 7780 1.17 0.8 0.48 5.8541121738218E-7 0.01
101 9 MEGA all RHOB 388 668 1.16 0.63 0.41 5.723084832205E-5 1
101 9 MEGA all P2RX1 5023 8533 1.16 0.41 0.23 0.000389335893656 1
101 9 MEGA all PSTPIP2 9050 9581 1.16 0.41 0.19 3.6792893945721E-5 0.87
101 9 MEGA all EGR1 1958 3238 1.15 0.75 0.32 2.4719619061871E-10 5.8929099881593E-6
101 9 MEGA all AZU1 566 913 1.15 0.63 0.32 2.3311545293678E-5 0.55
101 9 MEGA all RUFY1 80230 19760 1.15 0.3 0.16 0.002088083137482 1
101 9 MEGA all CLU 1191 2095 1.14 0.58 0.27 7.2575645424385E-7 0.01
101 9 MEGA all MPO 4353 7218 1.14 0.5 0.2 1.6403636618339E-6 0.03
101 9 MEGA all HMGN2 3151 4986 1.13 0.83 0.87 7.2216956752191E-5 1
101 9 MEGA all HMGB2 3148 5000 1.13 0.66 0.57 0.000193503944749 1
101 9 MEGA all ITGB3 3690 6156 1.11 0.27 0.002 9.7138750741182E-271 2.315690678919E-266
101 9 MEGA all H2AFZ 3015 4741 1.11 0.86 0.69 2.5022121384632E-8 0.000596502351688
101 9 MEGA all TMBIM1 64114 23410 1.11 0.36 0.23 0.006529776556827 1
101 9 MEGA all TPST2 8459 12021 1.11 0.38 0.27 0.01 1
101 9 MEGA all RBPMS2 348093 19098 1.11 0.27 0.02 4.3748853270431E-25 1.0429289131138E-20
101 9 MEGA all KLHDC8B 200942 28557 1.1 0.22 0.04 8.2127133365783E-8 0.001957828732307
101 9 MEGA all MYLK 4638 7590 1.1 0.27 0.01 1.1658440403424E-36 2.7792556077722E-32
101 9 MEGA all ACTN1 87 163 1.08 0.55 0.24 1.2721088340678E-7 0.003032580249534
101 9 MEGA all TMEM91 641649 32393 1.08 0.33 0.19 0.00540941419559 1
101 9 MEGA all GUCY1B1 2983 4687 1.08 0.27 0.08 2.4226084761491E-6 0.05
101 9 MEGA all TUBB 203068 20778 1.06 0.88 0.65 5.9889566171455E-9 0.000142770736796
101 9 MEGA all VCL 7414 12665 1.05 0.38 0.2 0.000239413991523 1
101 9 MEGA all PDLIM1 9124 2067 1.05 0.38 0.32 0.02 1
101 9 MEGA all GP6 51206 14388 1.05 0.27 0.004 5.0314564304813E-146 1.1994488984624E-141
101 9 MEGA all TUBA1B 10376 18809 1.05 0.86 0.71 5.6477696211196E-7 0.01
101 9 MEGA all ILK 3611 6040 1.04 0.5 0.3 0.000307602068508 1
101 9 MEGA all UBE2C 11065 15937 1.02 0.44 0.05 2.4306272773041E-26 5.7943723663652E-22
101 9 MEGA all RP11-81H14.2 NULL 1.01 0.22 0.07 0.000194872571555 1
101 9 MEGA all PARVB 29780 14653 1.01 0.44 0.21 2.4237536016133E-5 0.57
101 9 MEGA all CYTOR 112597 28717 1 0.61 0.36 1.117079838602E-5 0.26
101 9 MEGA all BCL2L1 598 992 1 0.36 0.18 0.000619088595788 1
101 9 MEGA all ATP2A3 489 813 0.99 0.72 0.36 6.9658649433146E-9 0.000166059254384
101 9 MEGA all GATA1 2623 4170 0.98 0.25 0.05 1.807439898673E-8 0.000430875597445
101 9 MEGA all DUT 1854 3078 0.98 0.75 0.58 5.8289467099658E-6 0.13
101 9 MEGA all CNST 163882 26486 0.98 0.5 0.4 0.01 1
101 9 MEGA all CMIP 80790 24319 0.97 0.38 0.19 0.000245851091021 1
101 9 MEGA all NEXN 91624 29557 0.96 0.16 0.01 7.730684459877E-12 1.8429178683901E-7
101 9 MEGA all TYMS 7298 12441 0.96 0.5 0.16 1.5475311164476E-9 3.6891594284994E-5
101 9 MEGA all TGFB1 7040 11766 0.96 0.61 0.5 0.005938567194264 1
101 9 MEGA all TAGLN2 8407 11554 0.96 0.88 0.77 9.2349176334407E-6 0.22
101 9 MEGA all ABHD16A 7920 13921 0.95 0.36 0.14 1.3618054354639E-5 0.32
101 9 MEGA all RNASE2 6036 10045 0.95 0.52 0.29 8.7208372975664E-5 1
101 9 MEGA all PTGIR 5739 9602 0.95 0.27 0.03 6.4479907225055E-17 1.5371365083381E-12
101 9 MEGA all TPM4 7171 12013 0.95 0.66 0.51 0.000692733944406 1
101 9 MEGA all CITED2 10370 1987 0.95 0.66 0.5 0.000678351541151 1
101 9 MEGA all MEIS1 4211 7000 0.95 0.5 0.15 3.1837434614955E-10 7.5897260378591E-6
101 9 MEGA all RP11-354E11.2 NULL 0.93 0.27 0.07 4.7912679530878E-7 0.01
101 9 MEGA all NRGN 4900 8000 0.93 0.19 0.1 0.03 1
101 9 MEGA all PPP3R1 5534 9317 0.92 0.38 0.26 0.01 1
101 9 MEGA all NUSAP1 51203 18538 0.91 0.38 0.09 5.9824894416435E-11 1.4261656579934E-6