Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 7 GRAN all S100A12 6283 10489 4.22 0.91 0.17 1.25457016644018e-141 2.99076981977674e-137
101 7 GRAN all S100A8 6279 10498 3.76 0.91 0.28 1.18683007655698e-94 2.82928421950418e-90
101 7 GRAN all S100A9 6280 10499 3.29 0.91 0.3 7.34113336774208e-91 1.75005278353603e-86
101 7 GRAN all CD177 57126 30072 2.8 0.84 0.01 0 0
101 7 GRAN all LCN2 3934 6526 2.74 0.61 0.008 0 0
101 7 GRAN all CDA 978 1712 2.31 0.88 0.09 3.06830744083948e-218 7.31453810821725e-214
101 7 GRAN all PGLYRP1 8993 8904 2.3 0.67 0.004 0 0
101 7 GRAN all S100P 6286 10504 2.24 0.86 0.03 0 0
101 7 GRAN all GCA 25801 15990 2.12 0.9 0.36 1.10219099559797e-74 2.62751311440601e-70
101 7 GRAN all MNDA 4332 7183 1.98 0.92 0.28 4.51707927107869e-88 1.07682652743245e-83
101 7 GRAN all RETN 56729 20389 1.98 0.62 0.06 2.11743098645304e-149 5.04774372860541e-145
101 7 GRAN all NCF1 653361 7660 1.89 0.94 0.26 1.62103592701581e-94 3.86438754641299e-90
101 7 GRAN all S100A6 6277 10496 1.88 0.96 0.79 7.45130687189101e-54 1.7763170451901e-49
101 7 GRAN all ALOX5AP 241 436 1.84 0.88 0.19 9.61661156938609e-106 2.29250403202595e-101
101 7 GRAN all IFITM2 10581 5413 1.82 0.94 0.71 4.85464415121857e-55 1.157298619209e-50
101 7 GRAN all S100A11 6282 10488 1.81 0.94 0.52 8.27633202466058e-60 1.97299479135884e-55
101 7 GRAN all MCEMP1 199675 27291 1.74 0.83 0.08 4.23215838441875e-220 1.00890423726158e-215
101 7 GRAN all PADI4 23569 18368 1.73 0.74 0.16 6.03566225830459e-90 1.43884152575723e-85
101 7 GRAN all BPI 671 1095 1.69 0.64 0.01 0 0
101 7 GRAN all CD14 929 1628 1.68 0.74 0.12 4.43656849511784e-99 1.05763356355114e-94
101 7 GRAN all NAMPT 10135 30092 1.68 0.74 0.25 3.1470495701381e-51 7.50225147025222e-47
101 7 GRAN all CTC-490G23.2 NULL 1.66 0.59 0.02 0 0
101 7 GRAN all LTF 4057 6720 1.62 0.47 0.003 0 0
101 7 GRAN all IFITM3 10410 5414 1.6 0.92 0.4 4.84190321157274e-61 1.15426130660682e-56
101 7 GRAN all FCGR3B 2215 3620 1.51 0.6 0.03 1.62902742397589e-250 3.88343847601613e-246
101 7 GRAN all TNFAIP6 7130 11898 1.51 0.65 0.01 0 0
101 7 GRAN all FCER1G 2207 3611 1.47 0.92 0.41 2.82426598392855e-56 6.73276767908727e-52
101 7 GRAN all CMTM2 146225 19173 1.44 0.55 0.02 0 0
101 7 GRAN all BASP1 10409 957 1.42 0.67 0.1 3.77785549211028e-108 9.0060297076417e-104
101 7 GRAN all RGL4 266747 31911 1.41 0.62 0.07 1.35659826514916e-119 3.23399460428908e-115
101 7 GRAN all HK3 3101 4925 1.4 0.64 0.06 1.22024907728674e-143 2.90895177534387e-139
101 7 GRAN all CYSTM1 84418 30239 1.38 0.64 0.13 4.12351907809791e-71 9.83005713027761e-67
101 7 GRAN all CKAP4 10970 16991 1.37 0.63 0.06 2.1014998376815e-155 5.00976546304892e-151
101 7 GRAN all ANXA3 306 541 1.37 0.57 0.02 0 0
101 7 GRAN all CHI3L1 1116 1932 1.37 0.47 0.01 0 0
101 7 GRAN all HGF 3082 4893 1.36 0.64 0.12 3.09280461054399e-80 7.37293691107582e-76
101 7 GRAN all ITGAM 3684 6149 1.36 0.69 0.17 1.8533034768459e-65 4.41809015845294e-61
101 7 GRAN all TSPO 706 1158 1.35 0.94 0.75 7.82259772739614e-49 1.86482907223397e-44
101 7 GRAN all CSF3R 1441 2439 1.34 0.86 0.45 3.28756287268505e-47 7.83722113219389e-43
101 7 GRAN all MSRB1 51734 14133 1.31 0.72 0.21 4.36200407757869e-60 1.03985815205398e-55
101 7 GRAN all MYL6 4637 7587 1.31 0.97 0.91 3.82951785755841e-54 9.1291876206335e-50
101 7 GRAN all CST7 8530 2479 1.29 0.74 0.17 4.70320093451315e-69 1.12119607077859e-64
101 7 GRAN all NKG7 4818 7830 1.28 0.84 0.34 1.72178419601816e-50 4.10456134488769e-46
101 7 GRAN all ZDHHC19 131540 20713 1.26 0.46 0.01 0 0
101 7 GRAN all FPR1 2357 3826 1.23 0.59 0.06 2.07179391299925e-122 4.93894950919891e-118
101 7 GRAN all CCPG1 9236 24227 1.23 0.7 0.23 3.15411857024778e-48 7.51910325961369e-44
101 7 GRAN all CLEC4E 26253 14555 1.2 0.54 0.04 5.32587070764623e-165 1.26963431799579e-160
101 7 GRAN all RFLNB 359845 28705 1.19 0.65 0.25 1.32731817039172e-38 3.16419378639681e-34
101 7 GRAN all MAPK14 1432 6876 1.18 0.74 0.23 8.08586578090532e-58 1.92758954351002e-53
101 7 GRAN all CYP4F3 4051 2646 1.17 0.42 0.004 0 0
101 7 GRAN all RGS2 5997 9998 1.16 0.53 0.16 1.16433365008432e-31 2.775654988436e-27
101 7 GRAN all CYBB 1536 2578 1.15 0.7 0.22 2.47473043347562e-44 5.89950988036254e-40
101 7 GRAN all SERPINA1 5265 8941 1.12 0.74 0.19 4.42497489715718e-61 1.0548697657333e-56
101 7 GRAN all SELL 6402 10720 1.11 0.82 0.49 4.28203364142039e-33 1.02079399977821e-28
101 7 GRAN all RNF149 284996 23137 1.09 0.7 0.37 2.42956554340915e-26 5.79184129893308e-22
101 7 GRAN all QPCT 25797 9753 1.07 0.52 0.05 2.84180323667174e-117 6.77457473590176e-113
101 7 GRAN all SLC2A3 6515 11007 1.06 0.81 0.35 5.06468999688971e-41 1.20737144835854e-36
101 7 GRAN all SLC16A3 9123 10924 1.06 0.6 0.19 1.05467444197266e-39 2.51423840221863e-35
101 7 GRAN all HP 3240 5141 1.04 0.43 0.01 3.19068531481947e-265 7.60627472199814e-261
101 7 GRAN all MXD1 4084 6761 1.04 0.64 0.27 1.82429063358933e-31 4.3489264414136e-27
101 7 GRAN all ADGRG3 222487 13728 1.04 0.55 0.09 1.34105270041903e-77 3.19693553252892e-73
101 7 GRAN all GBA 2629 4177 1.03 0.59 0.15 1.72922879698143e-52 4.12230852912404e-48
101 7 GRAN all CXCL8 3576 6025 1.03 0.38 0.16 2.62060150563553e-12 6.24725192928454e-08
101 7 GRAN all BCL2A1 597 991 1.03 0.64 0.23 9.57154373763069e-37 2.28176031161378e-32
101 7 GRAN all ANPEP 290 500 1.03 0.54 0.11 9.7867697406968e-59 2.33306803848471e-54
101 7 GRAN all MMP8 4317 7175 1.02 0.24 0.001 0 0
101 7 GRAN all VNN1 8876 12705 1.02 0.47 0.13 3.19501294160209e-36 7.61659135148522e-32
101 7 GRAN all MGAM 8972 7043 1.02 0.43 0.01 0 0
101 7 GRAN all GYG1 2992 4699 1.02 0.6 0.26 1.50866428881465e-29 3.59650479810524e-25
101 7 GRAN all PYGL 5836 9725 1.02 0.63 0.24 5.84344500415526e-37 1.39301885454057e-32
101 7 GRAN all DYSF 8291 3097 1 0.47 0.1 1.78627372556155e-45 4.25829793436617e-41
101 7 GRAN all FSTL3 10272 3973 1 0.35 0.03 2.77743559351611e-84 6.62112871138306e-80
101 7 GRAN all BST1 683 1118 1 0.58 0.15 1.0970255061144e-45 2.61519910402612e-41
101 7 GRAN all IVNS1ABP 10625 16951 0.98 0.65 0.26 1.48678757397111e-31 3.54435289758973e-27
101 7 GRAN all GRN 2896 4601 0.97 0.85 0.49 3.80387133835989e-30 9.06804888351614e-26
101 7 GRAN all ALPL 249 438 0.97 0.36 0.01 0 0
101 7 GRAN all SPI1 6688 11241 0.96 0.89 0.61 3.20896204145025e-33 7.64984461061326e-29
101 7 GRAN all CTSH 1512 2535 0.95 0.56 0.15 2.65599974825238e-43 6.33163779985884e-39
101 7 GRAN all RAB31 11031 9771 0.95 0.6 0.21 1.42714466686152e-33 3.40217017133118e-29
101 7 GRAN all SORL1 6653 11185 0.95 0.65 0.32 2.05811793816003e-27 4.9063473527797e-23
101 7 GRAN all LSP1 4046 6707 0.95 0.94 0.61 9.48388159060063e-38 2.26086253238328e-33
101 7 GRAN all CD55 1604 2665 0.94 0.7 0.33 1.99971661648205e-28 4.76712444203157e-24
101 7 GRAN all FOLR3 2352 3795 0.94 0.42 0.03 3.06769443430014e-141 7.3130767619281e-137
101 7 GRAN all FCN1 2219 3623 0.94 0.82 0.19 6.19091679459523e-61 1.47585265466356e-56
101 7 GRAN all ALOX5 240 435 0.94 0.58 0.15 3.64697304969392e-48 8.69401905316533e-44
101 7 GRAN all YWHAH 7533 12853 0.93 0.65 0.42 4.55237793283949e-18 1.08524137540961e-13
101 7 GRAN all MTX1 4580 7504 0.93 0.59 0.21 3.98628341235199e-34 9.50290102670591e-30
101 7 GRAN all ACSL1 2180 3569 0.93 0.47 0.1 4.03221842501288e-43 9.61240550338821e-39
101 7 GRAN all S100A4 6275 10494 0.93 0.9 0.78 3.11188442361372e-23 7.41842127745275e-19
101 7 GRAN all PSTPIP1 9051 9580 0.92 0.66 0.23 1.63212018254871e-38 3.89081130317786e-34
101 7 GRAN all PLAC8 51316 19254 0.92 0.82 0.53 1.64661201806346e-26 3.92535838986148e-22
101 7 GRAN all IL17RA 23765 5985 0.91 0.63 0.25 5.5074162890274e-29 1.31291296914124e-24
101 7 GRAN all VNN2 8875 12706 0.91 0.42 0.11 1.19640631765416e-30 2.85211302065575e-26
101 7 GRAN all MEGF9 1955 3234 0.91 0.53 0.12 2.13452053394623e-47 5.08848350087443e-43
101 7 GRAN all CEBPE 1053 1836 0.9 0.28 0.01 9.22546578092217e-125 2.19925878751404e-120
101 7 GRAN all UGCG 7357 12524 0.9 0.41 0.07 1.15633548070809e-50 2.75658815246002e-46
101 7 GRAN all PGD 5226 8891 0.9 0.83 0.53 5.61207757731472e-30 1.33786317365606e-25
101 7 GRAN all HMGB2 3148 5000 0.89 0.88 0.57 4.11642467596886e-32 9.81314478504216e-28
101 7 GRAN all CLEC4D 338339 14554 0.89 0.41 0.02 8.22867322950612e-155 1.96163341118196e-150
101 7 GRAN all SRPK1 6732 11305 0.88 0.61 0.27 3.69986763881255e-26 8.82011446416524e-22