Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 7 GRAN all S100A12 6283 10489 4.22 0.91 0.17 1.2545701664402E-141 2.9907698197767E-137
101 7 GRAN all S100A8 6279 10498 3.76 0.91 0.28 1.186830076557E-94 2.8292842195042E-90
101 7 GRAN all S100A9 6280 10499 3.29 0.91 0.3 7.3411333677421E-91 1.750052783536E-86
101 7 GRAN all CD177 57126 30072 2.8 0.84 0.01 0 0
101 7 GRAN all LCN2 3934 6526 2.74 0.61 0.008 0 0
101 7 GRAN all CDA 978 1712 2.31 0.88 0.09 3.0683074408395E-218 7.3145381082172E-214
101 7 GRAN all PGLYRP1 8993 8904 2.3 0.67 0.004 0 0
101 7 GRAN all S100P 6286 10504 2.24 0.86 0.03 0 0
101 7 GRAN all GCA 25801 15990 2.12 0.9 0.36 1.102190995598E-74 2.627513114406E-70
101 7 GRAN all MNDA 4332 7183 1.98 0.92 0.28 4.5170792710787E-88 1.0768265274324E-83
101 7 GRAN all RETN 56729 20389 1.98 0.62 0.06 2.117430986453E-149 5.0477437286054E-145
101 7 GRAN all NCF1 653361 7660 1.89 0.94 0.26 1.6210359270158E-94 3.864387546413E-90
101 7 GRAN all S100A6 6277 10496 1.88 0.96 0.79 7.451306871891E-54 1.7763170451901E-49
101 7 GRAN all ALOX5AP 241 436 1.84 0.88 0.19 9.6166115693861E-106 2.292504032026E-101
101 7 GRAN all IFITM2 10581 5413 1.82 0.94 0.71 4.8546441512186E-55 1.157298619209E-50
101 7 GRAN all S100A11 6282 10488 1.81 0.94 0.52 8.2763320246606E-60 1.9729947913588E-55
101 7 GRAN all MCEMP1 199675 27291 1.74 0.83 0.08 4.2321583844188E-220 1.0089042372616E-215
101 7 GRAN all PADI4 23569 18368 1.73 0.74 0.16 6.0356622583046E-90 1.4388415257572E-85
101 7 GRAN all BPI 671 1095 1.69 0.64 0.01 0 0
101 7 GRAN all CD14 929 1628 1.68 0.74 0.12 4.4365684951178E-99 1.0576335635511E-94
101 7 GRAN all NAMPT 10135 30092 1.68 0.74 0.25 3.1470495701381E-51 7.5022514702522E-47
101 7 GRAN all CTC-490G23.2 NULL 1.66 0.59 0.02 0 0
101 7 GRAN all LTF 4057 6720 1.62 0.47 0.003 0 0
101 7 GRAN all IFITM3 10410 5414 1.6 0.92 0.4 4.8419032115727E-61 1.1542613066068E-56
101 7 GRAN all FCGR3B 2215 3620 1.51 0.6 0.03 1.6290274239759E-250 3.8834384760161E-246
101 7 GRAN all TNFAIP6 7130 11898 1.51 0.65 0.01 0 0
101 7 GRAN all FCER1G 2207 3611 1.47 0.92 0.41 2.8242659839286E-56 6.7327676790873E-52
101 7 GRAN all CMTM2 146225 19173 1.44 0.55 0.02 0 0
101 7 GRAN all BASP1 10409 957 1.42 0.67 0.1 3.7778554921103E-108 9.0060297076417E-104
101 7 GRAN all RGL4 266747 31911 1.41 0.62 0.07 1.3565982651492E-119 3.2339946042891E-115
101 7 GRAN all HK3 3101 4925 1.4 0.64 0.06 1.2202490772867E-143 2.9089517753439E-139
101 7 GRAN all CYSTM1 84418 30239 1.38 0.64 0.13 4.1235190780979E-71 9.8300571302776E-67
101 7 GRAN all CKAP4 10970 16991 1.37 0.63 0.06 2.1014998376815E-155 5.0097654630489E-151
101 7 GRAN all ANXA3 306 541 1.37 0.57 0.02 0 0
101 7 GRAN all CHI3L1 1116 1932 1.37 0.47 0.01 0 0
101 7 GRAN all HGF 3082 4893 1.36 0.64 0.12 3.092804610544E-80 7.3729369110758E-76
101 7 GRAN all ITGAM 3684 6149 1.36 0.69 0.17 1.8533034768459E-65 4.4180901584529E-61
101 7 GRAN all TSPO 706 1158 1.35 0.94 0.75 7.8225977273961E-49 1.864829072234E-44
101 7 GRAN all CSF3R 1441 2439 1.34 0.86 0.45 3.287562872685E-47 7.8372211321939E-43
101 7 GRAN all MSRB1 51734 14133 1.31 0.72 0.21 4.3620040775787E-60 1.039858152054E-55
101 7 GRAN all MYL6 4637 7587 1.31 0.97 0.91 3.8295178575584E-54 9.1291876206335E-50
101 7 GRAN all CST7 8530 2479 1.29 0.74 0.17 4.7032009345131E-69 1.1211960707786E-64
101 7 GRAN all NKG7 4818 7830 1.28 0.84 0.34 1.7217841960182E-50 4.1045613448877E-46
101 7 GRAN all ZDHHC19 131540 20713 1.26 0.46 0.01 0 0
101 7 GRAN all FPR1 2357 3826 1.23 0.59 0.06 2.0717939129993E-122 4.9389495091989E-118
101 7 GRAN all CCPG1 9236 24227 1.23 0.7 0.23 3.1541185702478E-48 7.5191032596137E-44
101 7 GRAN all CLEC4E 26253 14555 1.2 0.54 0.04 5.3258707076462E-165 1.2696343179958E-160
101 7 GRAN all RFLNB 359845 28705 1.19 0.65 0.25 1.3273181703917E-38 3.1641937863968E-34
101 7 GRAN all MAPK14 1432 6876 1.18 0.74 0.23 8.0858657809053E-58 1.92758954351E-53
101 7 GRAN all CYP4F3 4051 2646 1.17 0.42 0.004 0 0
101 7 GRAN all RGS2 5997 9998 1.16 0.53 0.16 1.1643336500843E-31 2.775654988436E-27
101 7 GRAN all CYBB 1536 2578 1.15 0.7 0.22 2.4747304334756E-44 5.8995098803625E-40
101 7 GRAN all SERPINA1 5265 8941 1.12 0.74 0.19 4.4249748971572E-61 1.0548697657333E-56
101 7 GRAN all SELL 6402 10720 1.11 0.82 0.49 4.2820336414204E-33 1.0207939997782E-28
101 7 GRAN all RNF149 284996 23137 1.09 0.7 0.37 2.4295655434091E-26 5.7918412989331E-22
101 7 GRAN all QPCT 25797 9753 1.07 0.52 0.05 2.8418032366717E-117 6.7745747359018E-113
101 7 GRAN all SLC2A3 6515 11007 1.06 0.81 0.35 5.0646899968897E-41 1.2073714483585E-36
101 7 GRAN all SLC16A3 9123 10924 1.06 0.6 0.19 1.0546744419727E-39 2.5142384022186E-35
101 7 GRAN all HP 3240 5141 1.04 0.43 0.01 3.1906853148195E-265 7.6062747219981E-261
101 7 GRAN all MXD1 4084 6761 1.04 0.64 0.27 1.8242906335893E-31 4.3489264414136E-27
101 7 GRAN all ADGRG3 222487 13728 1.04 0.55 0.09 1.341052700419E-77 3.1969355325289E-73
101 7 GRAN all GBA 2629 4177 1.03 0.59 0.15 1.7292287969814E-52 4.122308529124E-48
101 7 GRAN all CXCL8 3576 6025 1.03 0.38 0.16 2.6206015056355E-12 6.2472519292845E-8
101 7 GRAN all BCL2A1 597 991 1.03 0.64 0.23 9.5715437376307E-37 2.2817603116138E-32
101 7 GRAN all ANPEP 290 500 1.03 0.54 0.11 9.7867697406968E-59 2.3330680384847E-54
101 7 GRAN all MMP8 4317 7175 1.02 0.24 0.001 0 0
101 7 GRAN all VNN1 8876 12705 1.02 0.47 0.13 3.1950129416021E-36 7.6165913514852E-32
101 7 GRAN all MGAM 8972 7043 1.02 0.43 0.01 0 0
101 7 GRAN all GYG1 2992 4699 1.02 0.6 0.26 1.5086642888147E-29 3.5965047981052E-25
101 7 GRAN all PYGL 5836 9725 1.02 0.63 0.24 5.8434450041553E-37 1.3930188545406E-32
101 7 GRAN all DYSF 8291 3097 1 0.47 0.1 1.7862737255616E-45 4.2582979343662E-41
101 7 GRAN all FSTL3 10272 3973 1 0.35 0.03 2.7774355935161E-84 6.6211287113831E-80
101 7 GRAN all BST1 683 1118 1 0.58 0.15 1.0970255061144E-45 2.6151991040261E-41
101 7 GRAN all IVNS1ABP 10625 16951 0.98 0.65 0.26 1.4867875739711E-31 3.5443528975897E-27
101 7 GRAN all GRN 2896 4601 0.97 0.85 0.49 3.8038713383599E-30 9.0680488835161E-26
101 7 GRAN all ALPL 249 438 0.97 0.36 0.01 0 0
101 7 GRAN all SPI1 6688 11241 0.96 0.89 0.61 3.2089620414502E-33 7.6498446106133E-29
101 7 GRAN all CTSH 1512 2535 0.95 0.56 0.15 2.6559997482524E-43 6.3316377998588E-39
101 7 GRAN all RAB31 11031 9771 0.95 0.6 0.21 1.4271446668615E-33 3.4021701713312E-29
101 7 GRAN all SORL1 6653 11185 0.95 0.65 0.32 2.05811793816E-27 4.9063473527797E-23
101 7 GRAN all LSP1 4046 6707 0.95 0.94 0.61 9.4838815906006E-38 2.2608625323833E-33
101 7 GRAN all CD55 1604 2665 0.94 0.7 0.33 1.999716616482E-28 4.7671244420316E-24
101 7 GRAN all FOLR3 2352 3795 0.94 0.42 0.03 3.0676944343001E-141 7.3130767619281E-137
101 7 GRAN all FCN1 2219 3623 0.94 0.82 0.19 6.1909167945952E-61 1.4758526546636E-56
101 7 GRAN all ALOX5 240 435 0.94 0.58 0.15 3.6469730496939E-48 8.6940190531653E-44
101 7 GRAN all YWHAH 7533 12853 0.93 0.65 0.42 4.5523779328395E-18 1.0852413754096E-13
101 7 GRAN all MTX1 4580 7504 0.93 0.59 0.21 3.986283412352E-34 9.5029010267059E-30
101 7 GRAN all ACSL1 2180 3569 0.93 0.47 0.1 4.0322184250129E-43 9.6124055033882E-39
101 7 GRAN all S100A4 6275 10494 0.93 0.9 0.78 3.1118844236137E-23 7.4184212774527E-19
101 7 GRAN all PSTPIP1 9051 9580 0.92 0.66 0.23 1.6321201825487E-38 3.8908113031779E-34
101 7 GRAN all PLAC8 51316 19254 0.92 0.82 0.53 1.6466120180635E-26 3.9253583898615E-22
101 7 GRAN all IL17RA 23765 5985 0.91 0.63 0.25 5.5074162890274E-29 1.3129129691412E-24
101 7 GRAN all VNN2 8875 12706 0.91 0.42 0.11 1.1964063176542E-30 2.8521130206557E-26
101 7 GRAN all MEGF9 1955 3234 0.91 0.53 0.12 2.1345205339462E-47 5.0884835008744E-43
101 7 GRAN all CEBPE 1053 1836 0.9 0.28 0.01 9.2254657809222E-125 2.199258787514E-120
101 7 GRAN all UGCG 7357 12524 0.9 0.41 0.07 1.1563354807081E-50 2.75658815246E-46
101 7 GRAN all PGD 5226 8891 0.9 0.83 0.53 5.6120775773147E-30 1.3378631736561E-25
101 7 GRAN all HMGB2 3148 5000 0.89 0.88 0.57 4.1164246759689E-32 9.8131447850422E-28
101 7 GRAN all CLEC4D 338339 14554 0.89 0.41 0.02 8.2286732295061E-155 1.961633411182E-150
101 7 GRAN all SRPK1 6732 11305 0.88 0.61 0.27 3.6998676388125E-26 8.8201144641652E-22