Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 6 ERY (CD34+) all PCLAF 9768 28961 1.34 0.65 0.16 0 0
101 6 ERY (CD34+) all STMN1 3925 6510 1.23 0.91 0.5 0 0
101 6 ERY (CD34+) all HIST1H4C 8364 4787 1.13 0.66 0.36 3.52293284362161e-286 8.39831960590955e-282
101 6 ERY (CD34+) all TYMS 7298 12441 1.07 0.62 0.14 0 0
101 6 ERY (CD34+) all H2AFZ 3015 4741 1.07 0.93 0.68 0 0
101 6 ERY (CD34+) all SLC40A1 30061 10909 1.06 0.66 0.29 0 0
101 6 ERY (CD34+) all TUBA1B 10376 18809 1.05 0.95 0.7 0 0
101 6 ERY (CD34+) all DUT 1854 3078 0.98 0.9 0.57 0 0
101 6 ERY (CD34+) all TUBB 203068 20778 0.97 0.93 0.64 0 0
101 6 ERY (CD34+) all RGS18 64407 14261 0.95 0.55 0.28 1.27254482150643e-253 3.03361959998917e-249
101 6 ERY (CD34+) all HMGN2 3151 4986 0.85 0.98 0.87 0 0
101 6 ERY (CD34+) all PLEK 5341 9070 0.84 0.79 0.48 3.72796092913361e-265 8.88708605896162e-261
101 6 ERY (CD34+) all HMGB1 3146 4983 0.83 0.99 0.85 0 0
101 6 ERY (CD34+) all RAP1B 5908 9857 0.78 0.86 0.6 1.88173560450433e-195 4.48586950757788e-191
101 6 ERY (CD34+) all FCER1A 2205 3609 0.78 0.19 0.04 0 0
101 6 ERY (CD34+) all CNRIP1 25927 24546 0.77 0.31 0.02 0 0
101 6 ERY (CD34+) all HMGA1 3159 5010 0.73 0.84 0.5 0 0
101 6 ERY (CD34+) all GATA1 2623 4170 0.72 0.35 0.03 0 0
101 6 ERY (CD34+) all RANBP1 5902 9847 0.72 0.84 0.47 0 0
101 6 ERY (CD34+) all HMGB2 3148 5000 0.71 0.81 0.56 2.57264488564262e-300 6.13292814288343e-296
101 6 ERY (CD34+) all PTGS1 5742 9604 0.7 0.33 0.08 0 0
101 6 ERY (CD34+) all PCNA 5111 8729 0.67 0.61 0.17 0 0
101 6 ERY (CD34+) all RAN 5901 9846 0.65 0.91 0.65 0 0
101 6 ERY (CD34+) all FABP5 2171 3560 0.65 0.67 0.29 0 0
101 6 ERY (CD34+) all LTBP1 4052 6714 0.64 0.25 0.02 0 0
101 6 ERY (CD34+) all BEX3 27018 13388 0.64 0.7 0.27 0 0
101 6 ERY (CD34+) all RRM2 6241 10452 0.64 0.4 0.04 0 0
101 6 ERY (CD34+) all MPIG6B 80739 13937 0.63 0.29 0.05 0 0
101 6 ERY (CD34+) all HACD1 9200 9639 0.63 0.58 0.17 0 0
101 6 ERY (CD34+) all CDK4 1019 1773 0.61 0.77 0.33 0 0
101 6 ERY (CD34+) all MPO 4353 7218 0.61 0.37 0.2 6.70151240138018e-108 1.59757354136502e-103
101 6 ERY (CD34+) all CYTOR 112597 28717 0.61 0.73 0.35 0 0
101 6 ERY (CD34+) all TK1 7083 11830 0.6 0.43 0.06 0 0
101 6 ERY (CD34+) all CKS1B 1163 19083 0.6 0.59 0.16 0 0
101 6 ERY (CD34+) all CALR 811 1455 0.6 0.89 0.67 6.40042128173784e-277 1.52579642935348e-272
101 6 ERY (CD34+) all UHRF1 29128 12556 0.58 0.48 0.08 0 0
101 6 ERY (CD34+) all TUBA1C 84790 20768 0.58 0.73 0.34 0 0
101 6 ERY (CD34+) all ZWINT 11130 13195 0.56 0.49 0.08 0 0
101 6 ERY (CD34+) all CD164 8763 1632 0.56 0.91 0.64 3.68434972563337e-255 8.78312131093739e-251
101 6 ERY (CD34+) all LIMS1 3987 6616 0.55 0.69 0.36 3.32570582623615e-265 7.92815011916435e-261
101 6 ERY (CD34+) all RRN3 54700 30346 0.55 0.44 0.16 0 0
101 6 ERY (CD34+) all ERH 2079 3447 0.54 0.89 0.55 0 0
101 6 ERY (CD34+) all UBE2C 11065 15937 0.54 0.34 0.04 0 0
101 6 ERY (CD34+) all IGLL1 3543 5870 0.54 0.45 0.16 0 0
101 6 ERY (CD34+) all ABCC4 10257 55 0.54 0.37 0.08 0 0
101 6 ERY (CD34+) all LAT 27040 18874 0.54 0.25 0.12 2.1929249761384e-84 5.22771385061633e-80
101 6 ERY (CD34+) all NUCB2 4925 8044 0.53 0.75 0.42 4.65119095015737e-302 1.10879741060801e-297
101 6 ERY (CD34+) all CKS2 1164 2000 0.53 0.71 0.27 0 0
101 6 ERY (CD34+) all CENPU 79682 21348 0.53 0.54 0.11 0 0
101 6 ERY (CD34+) all NASP 4678 7644 0.53 0.69 0.34 0 0
101 6 ERY (CD34+) all HNRNPAB 3182 5034 0.53 0.77 0.37 0 0
101 6 ERY (CD34+) all DHFR 1719 2861 0.52 0.47 0.09 0 0
101 6 ERY (CD34+) all HMGN1 3150 4984 0.52 0.98 0.78 0 0
101 6 ERY (CD34+) all MIF 4282 7097 0.52 0.98 0.84 0 0
101 6 ERY (CD34+) all GATA2 2624 4171 0.52 0.59 0.24 0 0
101 6 ERY (CD34+) all SNRPD1 6632 11158 0.52 0.81 0.45 0 0
101 6 ERY (CD34+) all MYC 4609 7553 0.51 0.52 0.23 1.57289106505454e-276 3.74961500998352e-272
101 6 ERY (CD34+) all TMEM106C 79022 28775 0.51 0.52 0.14 0 0
101 6 ERY (CD34+) all UNG 7374 12572 0.51 0.47 0.12 0 0
101 6 ERY (CD34+) all PDLIM1 9124 2067 0.5 0.64 0.31 5.81799367031444e-290 1.38695151106626e-285
101 6 ERY (CD34+) all ITGA2B 3674 6138 0.5 0.25 0.02 0 0
101 6 ERY (CD34+) all IMPDH2 3615 6053 0.5 0.85 0.48 0 0
101 6 ERY (CD34+) all MCM7 4176 6950 0.5 0.65 0.23 0 0
101 6 ERY (CD34+) all PRTN3 5657 9495 0.5 0.19 0.05 3.67134554510006e-218 8.75212064496403e-214
101 6 ERY (CD34+) all MCM3 4172 6945 0.5 0.54 0.17 0 0
101 6 ERY (CD34+) all NME4 4833 7852 0.49 0.71 0.35 0 0
101 6 ERY (CD34+) all NFE2 4778 7780 0.48 0.82 0.47 2.35892286284816e-273 5.62343621274373e-269
101 6 ERY (CD34+) all NT5C3A 51251 17820 0.48 0.62 0.3 1.01946567137795e-255 2.43030421399791e-251
101 6 ERY (CD34+) all NCL 4691 7667 0.48 0.9 0.67 3.85574722574932e-263 9.1917158114638e-259
101 6 ERY (CD34+) all TUBB4B 10383 20771 0.48 0.68 0.36 3.52978214780404e-270 8.41464766215005e-266
101 6 ERY (CD34+) all TOMM5 401505 31369 0.48 0.78 0.43 0 0
101 6 ERY (CD34+) all NUCKS1 64710 29923 0.48 0.82 0.52 7.96155616900558e-296 1.89795537512924e-291
101 6 ERY (CD34+) all MARCKSL1 65108 7142 0.47 0.57 0.22 0 0
101 6 ERY (CD34+) all RBPMS2 348093 19098 0.47 0.23 0.01 0 0
101 6 ERY (CD34+) all PTMA 5757 9623 0.47 1 0.95 0 0
101 6 ERY (CD34+) all H2AFV 94239 20664 0.47 0.88 0.57 0 0
101 6 ERY (CD34+) all MDK 4192 6972 0.47 0.41 0.13 0 0
101 6 ERY (CD34+) all CAVIN1 284119 9688 0.46 0.43 0.12 0 0
101 6 ERY (CD34+) all CITED2 10370 1987 0.46 0.77 0.49 1.57531006044388e-169 3.75538165309217e-165
101 6 ERY (CD34+) all FADS1 3992 3574 0.46 0.54 0.18 0 0
101 6 ERY (CD34+) all DTD1 92675 16219 0.46 0.47 0.17 0 0
101 6 ERY (CD34+) all TOP2A 7153 11989 0.46 0.35 0.05 0 0
101 6 ERY (CD34+) all HSPD1 3329 5261 0.46 0.8 0.53 1.73866825106147e-240 4.14481124370543e-236
101 6 ERY (CD34+) all SERBP1 26135 17860 0.46 0.89 0.61 0 0
101 6 ERY (CD34+) all GFI1B 8328 4238 0.45 0.27 0.05 0 0
101 6 ERY (CD34+) all YBX1 4904 8014 0.45 0.99 0.89 0 0
101 6 ERY (CD34+) all NME1 4830 7849 0.45 0.66 0.28 0 0
101 6 ERY (CD34+) all C19orf48 84798 29667 0.45 0.62 0.22 0 0
101 6 ERY (CD34+) all NUSAP1 51203 18538 0.45 0.41 0.08 0 0
101 6 ERY (CD34+) all CENPM 79019 18352 0.44 0.4 0.05 0 0
101 6 ERY (CD34+) all CDT1 81620 24576 0.44 0.49 0.11 0 0
101 6 ERY (CD34+) all DEK 7913 2768 0.44 0.83 0.54 1.38515314444577e-297 3.30206658104428e-293
101 6 ERY (CD34+) all PRSS57 400668 31397 0.44 0.91 0.5 1.49947762688645e-297 3.57460471473461e-293
101 6 ERY (CD34+) all RBBP4 5928 9887 0.44 0.85 0.53 0 0
101 6 ERY (CD34+) all CDCA7 83879 14628 0.44 0.45 0.12 0 0
101 6 ERY (CD34+) all MAD2L1 4085 6763 0.44 0.47 0.1 0 0
101 6 ERY (CD34+) all PRKAR2B 5577 9392 0.44 0.33 0.09 0 0
101 6 ERY (CD34+) all SIVA1 10572 17712 0.44 0.73 0.41 0 0
101 6 ERY (CD34+) all PA2G4 5036 8550 0.44 0.81 0.49 7.47075557920532e-294 1.78095342252676e-289
101 6 ERY (CD34+) all TPM1 7168 12010 0.43 0.27 0.07 0 0