Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 5 ERY all HBA2 3040 4824 4.38 0.62 0.1 0 0
101 5 ERY all HBB 3043 4827 4.36 0.63 0.18 0 0
101 5 ERY all AHSP 51327 18075 3.55 0.56 0.02 0 0
101 5 ERY all HBD 3045 4829 3.53 0.61 0.04 0 0
101 5 ERY all CA1 759 1368 3.49 0.55 0.03 0 0
101 5 ERY all SLC25A37 51312 29786 3.2 0.71 0.27 0 0
101 5 ERY all HBA1 3039 4823 3.05 0.59 0.02 0 0
101 5 ERY all ALAS2 212 397 2.63 0.56 0.01 0 0
101 5 ERY all SLC4A1 6521 11027 2.47 0.5 0.01 0 0
101 5 ERY all HBM 3042 4826 2.2 0.28 0.008 0 0
101 5 ERY all HMBS 3145 4982 2.06 0.51 0.1 0 0
101 5 ERY all SLC2A1 6513 11005 2.03 0.48 0.05 0 0
101 5 ERY all BLVRB 645 1063 2.02 0.72 0.35 0 0
101 5 ERY all SNCA 6622 11138 2.01 0.63 0.21 0 0
101 5 ERY all TRIM58 25893 24150 1.98 0.56 0.18 0 0
101 5 ERY all SLC25A39 51629 24279 1.95 0.73 0.36 0 0
101 5 ERY all ANKRD9 122416 20096 1.93 0.43 0.01 0 0
101 5 ERY all SELENBP1 8991 10719 1.85 0.46 0.01 0 0
101 5 ERY all TMCC2 9911 24239 1.81 0.34 0.01 0 0
101 5 ERY all CA2 760 1373 1.74 0.41 0.09 0 0
101 5 ERY all XPO7 23039 14108 1.72 0.44 0.12 0 0
101 5 ERY all GYPA 2993 4702 1.72 0.35 0.008 0 0
101 5 ERY all BNIP3L 665 1085 1.66 0.67 0.44 0 0
101 5 ERY all BSG 682 1116 1.62 0.78 0.55 0 0
101 5 ERY all EPB42 2038 3381 1.59 0.43 0.01 0 0
101 5 ERY all HBQ1 3049 4833 1.52 0.43 0.02 0 0
101 5 ERY all BCL2L1 598 992 1.49 0.52 0.16 0 0
101 5 ERY all UBB 7314 12463 1.47 0.91 0.77 0 0
101 5 ERY all ANK1 286 492 1.39 0.4 0.01 0 0
101 5 ERY all CPEB4 80315 21747 1.38 0.42 0.13 0 0
101 5 ERY all PRDX2 7001 9353 1.37 0.46 0.27 0 0
101 5 ERY all IFIT1B 439996 23442 1.33 0.31 0.006 0 0
101 5 ERY all TERF2IP 54386 19246 1.3 0.62 0.41 0 0
101 5 ERY all STOM 2040 3383 1.29 0.54 0.26 0 0
101 5 ERY all RHAG 6005 10006 1.25 0.29 0.009 0 0
101 5 ERY all GLRX5 51218 20134 1.25 0.52 0.17 0 0
101 5 ERY all DMTN 2039 3382 1.24 0.4 0.03 0 0
101 5 ERY all FECH 2235 3647 1.23 0.44 0.09 0 0
101 5 ERY all TAL1 6886 11556 1.22 0.38 0.03 0 0
101 5 ERY all FBXO7 25793 13586 1.19 0.64 0.37 0 0
101 5 ERY all TFRC 7037 11763 1.18 0.54 0.27 0 0
101 5 ERY all TRAK2 66008 13206 1.17 0.41 0.14 0 0
101 5 ERY all RBM38 55544 15818 1.16 0.35 0.04 0 0
101 5 ERY all KLF1 10661 6345 1.14 0.33 0.02 0 0
101 5 ERY all PNP 4860 7892 1.14 0.56 0.32 0 0
101 5 ERY all SMIM1 388588 44204 1.13 0.32 0.04 0 0
101 5 ERY all RIOK3 8780 11451 1.13 0.57 0.32 0 0
101 5 ERY all NUDT4 11163 8051 1.13 0.49 0.26 0 0
101 5 ERY all IFI27 3429 5397 1.13 0.22 0.008 0 0
101 5 ERY all HEMGN 55363 17509 1.11 0.31 0.06 0 0
101 5 ERY all RP11-20D14.6 NULL 1.11 0.26 0.01 0 0
101 5 ERY all FAM210B 116151 16102 1.1 0.47 0.17 0 0
101 5 ERY all STRADB 55437 13205 1.1 0.48 0.21 0 0
101 5 ERY all EPB41 2035 3377 1.09 0.49 0.2 0 0
101 5 ERY all DCAF12 25853 19911 1.09 0.44 0.21 0 0
101 5 ERY all UROD 7389 12591 1.08 0.48 0.29 0 0
101 5 ERY all YPEL4 219539 18328 1.08 0.32 0.009 0 0
101 5 ERY all NARF 26502 29916 1.07 0.5 0.31 0 0
101 5 ERY all GYPB 2994 4703 1.07 0.29 0.006 0 0
101 5 ERY all TSPAN5 10098 17753 1.06 0.35 0.05 0 0
101 5 ERY all PIM1 5292 8986 1.05 0.63 0.47 0 0
101 5 ERY all WNK1 65125 14540 1.04 0.5 0.28 0 0
101 5 ERY all ARG1 383 663 1.03 0.21 0.006 0 0
101 5 ERY all GMPR 2766 4376 1.01 0.33 0.03 0 0
101 5 ERY all PCGF5 84333 28264 1.01 0.4 0.18 0 0
101 5 ERY all NCOA4 8031 7671 0.99 0.72 0.54 0 0
101 5 ERY all GATA1 2623 4170 0.98 0.31 0.02 0 0
101 5 ERY all SEC62 7095 11846 0.98 0.61 0.44 0 0
101 5 ERY all FKBP8 23770 3724 0.97 0.77 0.6 0 0
101 5 ERY all MYL4 4635 7585 0.97 0.27 0.007 0 0
101 5 ERY all GUK1 2987 4693 0.97 0.8 0.68 0 0
101 5 ERY all TOP1 7150 11986 0.97 0.54 0.33 0 0
101 5 ERY all ADIPOR1 51094 24040 0.96 0.52 0.33 0 0
101 5 ERY all PCSK1N 27344 17301 0.93 0.23 0.01 0 0
101 5 ERY all NPRL3 8131 14124 0.93 0.4 0.15 0 0
101 5 ERY all YOD1 55432 25035 0.93 0.31 0.04 0 0
101 5 ERY all RHD 6007 10009 0.93 0.27 0.006 0 0
101 5 ERY all SPTA1 6708 11272 0.91 0.24 0.01 0 0
101 5 ERY all TENT5C 54855 24712 0.91 0.39 0.14 0 0
101 5 ERY all TESC 54997 26065 0.9 0.56 0.27 0 0
101 5 ERY all TSPO2 222642 21256 0.89 0.24 0.004 0 0
101 5 ERY all LPIN2 9663 14450 0.88 0.35 0.14 0 0
101 5 ERY all TBCEL 219899 28115 0.88 0.28 0.04 0 0
101 5 ERY all RIPOR3 140876 16168 0.88 0.25 0.01 0 0
101 5 ERY all TCP11L2 255394 28627 0.88 0.27 0.05 0 0
101 5 ERY all KLF3 51274 16516 0.87 0.41 0.28 4.26107164411449e-194 1.01579686924045e-189
101 5 ERY all ARL4A 10124 695 0.85 0.44 0.29 6.22599992111674e-242 1.48421612119502e-237
101 5 ERY all FHDC1 85462 29363 0.84 0.26 0.008 0 0
101 5 ERY all FBXO30 84085 15600 0.83 0.24 0.05 0 0
101 5 ERY all TNS1 7145 11973 0.83 0.26 0.01 0 0
101 5 ERY all SNHG10 283596 27510 0.83 0.31 0.16 4.70882498713818e-267 1.12253678868387e-262
101 5 ERY all SLC1A5 6510 10943 0.82 0.39 0.16 0 0
101 5 ERY all MARCHF8 220972 23356 0.82 0.32 0.08 0 0
101 5 ERY all DEPP1 11067 23355 0.82 0.1 0.03 3.16790485343876e-128 7.55196838011267e-124
101 5 ERY all E2F2 1870 3114 0.81 0.27 0.03 0 0
101 5 ERY all SLC7A5 8140 11063 0.81 0.3 0.08 0 0
101 5 ERY all SOX6 55553 16421 0.8 0.22 0.01 0 0
101 5 ERY all CPOX 1371 2321 0.8 0.27 0.06 0 0
101 5 ERY all HIST1H1C 3006 4716 0.8 0.38 0.24 2.96262406192009e-195 7.06259950121131e-191
101 5 ERY all EMC3 55831 23999 0.8 0.44 0.23 0 0