Marker Genes

Dataset: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

  • tissue: Bone marrow
  • ontology: Bone marrow
  • genotype: -
  • stage: Adult
  • treatment condition: AML
  • cell/nucleus: Cells
  • pmid: 31413257
  • subset name: all
  • total genes: 20090
  • clustering: Seurat
  • pseudotime: None
  • link:

Rows:100
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
101 4 DEND (M) all HLA-DPA1 3113 4938 1.43 0.89 0.48 0 0
101 4 DEND (M) all HLA-DQB1 3119 4944 1.39 0.74 0.29 0 0
101 4 DEND (M) all HLA-DPB1 3115 4940 1.34 0.9 0.5 0 0
101 4 DEND (M) all HLA-DRA 3122 4947 1.34 0.95 0.58 0 0
101 4 DEND (M) all HLA-DQA1 3117 4942 1.31 0.69 0.25 0 0
101 4 DEND (M) all CD74 972 1697 1.27 0.98 0.79 0 0
101 4 DEND (M) all HLA-DRB1 3123 4948 1.18 0.92 0.54 0 0
101 4 DEND (M) all HLA-DRB5 3127 4953 1.14 0.89 0.47 0 0
101 4 DEND (M) all CST3 1471 2475 1.06 0.95 0.65 0 0
101 4 DEND (M) all HSPA1B 3304 5233 0.98 0.6 0.27 0 0
101 4 DEND (M) all HSPA1A 3303 5232 0.89 0.57 0.31 0 0
101 4 DEND (M) all LGALS2 3957 6562 0.82 0.32 0.1 0 0
101 4 DEND (M) all LGALS1 3956 6561 0.81 0.95 0.59 0 0
101 4 DEND (M) all S100B 6285 10500 0.8 0.25 0.06 0 0
101 4 DEND (M) all SPINK2 6691 11245 0.8 0.77 0.45 0 0
101 4 DEND (M) all LSP1 4046 6707 0.78 0.84 0.59 0 0
101 4 DEND (M) all GPX1 2876 4553 0.71 0.99 0.83 0 0
101 4 DEND (M) all PLD4 122618 23792 0.69 0.51 0.12 0 0
101 4 DEND (M) all HLA-DMA 3108 4934 0.68 0.84 0.44 0 0
101 4 DEND (M) all CD36 948 1663 0.64 0.51 0.22 0 0
101 4 DEND (M) all H3F3B 3021 4765 0.63 0.99 0.94 0 0
101 4 DEND (M) all IRF8 3394 5358 0.63 0.43 0.12 0 0
101 4 DEND (M) all VIM 7431 12692 0.63 0.99 0.9 0 0
101 4 DEND (M) all AHR 196 348 0.63 0.65 0.26 0 0
101 4 DEND (M) all DBI 1622 2690 0.62 0.88 0.56 0 0
101 4 DEND (M) all LY86 9450 16837 0.62 0.69 0.24 0 0
101 4 DEND (M) all MEF2C 4208 6996 0.61 0.83 0.44 0 0
101 4 DEND (M) all PKIB 5570 9018 0.6 0.24 0.03 0 0
101 4 DEND (M) all GLIPR1 11010 17001 0.6 0.84 0.51 0 0
101 4 DEND (M) all EMB 133418 30465 0.6 0.79 0.49 0 0
101 4 DEND (M) all HLA-DQB2 3120 4945 0.58 0.27 0.04 0 0
101 4 DEND (M) all GSN 2934 4620 0.58 0.69 0.28 0 0
101 4 DEND (M) all SAMHD1 25939 15925 0.58 0.7 0.34 0 0
101 4 DEND (M) all ZFP36 7538 12862 0.58 0.89 0.66 0 0
101 4 DEND (M) all KLF6 1316 2235 0.55 0.92 0.76 0 0
101 4 DEND (M) all ATF3 467 785 0.52 0.47 0.2 0 0
101 4 DEND (M) all ACY3 91703 24104 0.52 0.23 0.04 0 0
101 4 DEND (M) all RP11-124N14.3 NULL 0.51 0.34 0.09 0 0
101 4 DEND (M) all CXCL8 3576 6025 0.49 0.33 0.14 0 0
101 4 DEND (M) all LMNA 4000 6636 0.49 0.44 0.15 0 0
101 4 DEND (M) all HSP90AA1 3320 5253 0.49 0.94 0.8 0 0
101 4 DEND (M) all HDAC9 9734 14065 0.49 0.47 0.12 0 0
101 4 DEND (M) all TAGLN2 8407 11554 0.48 0.95 0.75 0 0
101 4 DEND (M) all CAPG 822 1474 0.48 0.68 0.35 0 0
101 4 DEND (M) all NFKBIA 4792 7797 0.48 0.72 0.51 0 0
101 4 DEND (M) all MYADM 91663 7544 0.48 0.82 0.51 0 0
101 4 DEND (M) all HLA-DMB 3109 4935 0.47 0.52 0.17 0 0
101 4 DEND (M) all MAP3K8 1326 6860 0.46 0.58 0.26 0 0
101 4 DEND (M) all MS4A6A 64231 13375 0.46 0.4 0.2 0 0
101 4 DEND (M) all DNAJB1 3337 5270 0.46 0.58 0.37 0 0
101 4 DEND (M) all FLT3 2322 3765 0.45 0.63 0.27 0 0
101 4 DEND (M) all CRIP1 1396 2360 0.45 0.85 0.61 0 0
101 4 DEND (M) all RAB11FIP1 80223 30265 0.45 0.61 0.28 0 0
101 4 DEND (M) all ACTG1 71 144 0.45 0.99 0.92 0 0
101 4 DEND (M) all CD83 9308 1703 0.45 0.35 0.12 0 0
101 4 DEND (M) all ANKRD28 23243 29024 0.44 0.85 0.59 0 0
101 4 DEND (M) all PAK1 5058 8590 0.44 0.53 0.21 0 0
101 4 DEND (M) all ANXA1 301 533 0.44 0.88 0.66 0 0
101 4 DEND (M) all GSTP1 2950 4638 0.43 0.96 0.76 0 0
101 4 DEND (M) all RUNX2 860 10472 0.41 0.44 0.15 0 0
101 4 DEND (M) all HIP1 3092 4913 0.4 0.48 0.16 0 0
101 4 DEND (M) all CCL3 6348 10627 0.4 0.3 0.11 0 0
101 4 DEND (M) all ACTB 60 132 0.39 1 0.96 0 0
101 4 DEND (M) all JAML 120425 19084 0.39 0.46 0.18 0 0
101 4 DEND (M) all UBC 7316 12468 0.38 0.96 0.87 0 0
101 4 DEND (M) all PMAIP1 5366 9108 0.38 0.47 0.22 0 0
101 4 DEND (M) all CD44 960 1681 0.37 0.87 0.66 0 0
101 4 DEND (M) all TPM3 7170 12012 0.37 0.95 0.77 0 0
101 4 DEND (M) all AHNAK 79026 347 0.37 0.8 0.47 0 0
101 4 DEND (M) all LCP1 3936 6528 0.37 0.88 0.63 0 0
101 4 DEND (M) all FCER1A 2205 3609 0.37 0.14 0.03 0 0
101 4 DEND (M) all TRA2B 6434 10781 0.36 0.86 0.6 0 0
101 4 DEND (M) all TMSB10 9168 11879 0.36 0.99 0.95 0 0
101 4 DEND (M) all RPS4Y1 6192 10425 0.35 0.71 0.39 0 0
101 4 DEND (M) all BGLAP 632 1043 0.35 0.13 0.02 0 0
101 4 DEND (M) all MS4A4E 643680 14284 0.35 0.17 0.03 0 0
101 4 DEND (M) all CPVL 54504 14399 0.35 0.3 0.13 0 0
101 4 DEND (M) all LAT2 7462 12749 0.35 0.72 0.41 0 0
101 4 DEND (M) all GLUD1 2746 4335 0.33 0.62 0.33 0 0
101 4 DEND (M) all S100Z 170591 30367 0.33 0.49 0.21 0 0
101 4 DEND (M) all PLP2 5355 9087 0.33 0.82 0.55 0 0
101 4 DEND (M) all RP11-290D2.6 NULL 0.33 0.26 0.09 0 0
101 4 DEND (M) all DUSP1 1843 3064 0.33 0.9 0.74 5.67901988193156e-269 1.35382154965366e-264
101 4 DEND (M) all SLC25A5 292 10991 0.32 0.91 0.7 0 0
101 4 DEND (M) all UVRAG 7405 12640 0.32 0.51 0.22 0 0
101 4 DEND (M) all CD34 947 1662 0.32 0.43 0.18 0 0
101 4 DEND (M) all CFL1 1072 1874 0.32 0.98 0.9 0 0
101 4 DEND (M) all MRPL33 9553 14487 0.32 0.77 0.52 0 0
101 4 DEND (M) all TRG-AS1 100506776 48974 0.32 0.47 0.24 0 0
101 4 DEND (M) all IL18 3606 5986 0.31 0.63 0.33 0 0
101 4 DEND (M) all PYCARD 29108 16608 0.31 0.88 0.6 0 0
101 4 DEND (M) all PTGER4 5734 9596 0.31 0.5 0.23 0 0
101 4 DEND (M) all SPCS1 28972 23401 0.31 0.85 0.63 0 0
101 4 DEND (M) all TCF4 6925 11634 0.31 0.5 0.28 0 0
101 4 DEND (M) all HSPH1 10808 16969 0.31 0.46 0.24 0 0
101 4 DEND (M) all PPP1R15A 23645 14375 0.31 0.84 0.64 0 0
101 4 DEND (M) all HSPA5 3309 5238 0.31 0.67 0.44 1.50202371594938e-289 3.58067433645172e-285
101 4 DEND (M) all RHOA 387 667 0.31 0.98 0.86 0 0
101 4 DEND (M) all WDFY2 115825 20482 0.31 0.59 0.29 0 0
101 4 DEND (M) all IGFBP7 3490 5476 0.31 0.55 0.3 0 0